RNA–Protein interactions for RNA: ENST00000312579.3

CCDC85B-201, Transcript of coiled-coil domain containing 85B, humanhuman

APPRIS P1 BASIC

Gene CCDC85B, Length 1,524 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85B-201ENST00000312579 BARGINQ6ZT62 677 aa29.67■■■□□ 2.34
CCDC85B-201ENST00000312579 RRP7AQ9Y3A4 280 aaKnown RBP29.67■■■□□ 2.34
CCDC85B-201ENST00000312579 MAPK8IP3Q9UPT6 1336 aa29.67■■■□□ 2.34
CCDC85B-201ENST00000312579 APAF1O14727 1248 aa29.66■■■□□ 2.34
CCDC85B-201ENST00000312579 CENPBP07199 599 aaPredicted RBP29.66■■■□□ 2.34
CCDC85B-201ENST00000312579 MTHFSDQ2M296 383 aaKnown RBP29.66■■■□□ 2.34
CCDC85B-201ENST00000312579 OVOS2A0A0G2JMS6 1433 aa29.66■■■□□ 2.34
CCDC85B-201ENST00000312579 POTEAQ6S8J7 498 aa29.66■■■□□ 2.34
CCDC85B-201ENST00000312579 WNK3Q9BYP7 1800 aa29.65■■■□□ 2.34
CCDC85B-201ENST00000312579 NEFMP07197 916 aa29.64■■■□□ 2.34
CCDC85B-201ENST00000312579 PARP4Q9UKK3 1724 aaKnown RBP29.63■■■□□ 2.33
CCDC85B-201ENST00000312579 NEUROD2Q15784 382 aa29.63■■■□□ 2.33
CCDC85B-201ENST00000312579 PLEKHO1Q53GL0 409 aaPredicted RBP29.63■■■□□ 2.33
CCDC85B-201ENST00000312579 SALL2Q9Y467 1007 aaPredicted RBP29.62■■■□□ 2.33
CCDC85B-201ENST00000312579 A0A0G2JS52 829 aa29.61■■■□□ 2.33
CCDC85B-201ENST00000312579 MYT1Q01538 1121 aa29.61■■■□□ 2.33
CCDC85B-201ENST00000312579 TMPOP42166 694 aaKnown RBP29.61■■■□□ 2.33
CCDC85B-201ENST00000312579 ZCRB1Q8TBF4 217 aaKnown RBP29.61■■■□□ 2.33
CCDC85B-201ENST00000312579 ZNF530Q6P9A1 599 aaPredicted RBP29.6■■■□□ 2.33
CCDC85B-201ENST00000312579 RBM6P78332 1123 aaKnown RBP29.59■■■□□ 2.33
CCDC85B-201ENST00000312579 NFE2L2Q16236 605 aa29.59■■■□□ 2.33
CCDC85B-201ENST00000312579 AMOTQ4VCS5 1084 aa29.59■■■□□ 2.33
CCDC85B-201ENST00000312579 SPG7Q9UQ90 795 aa29.59■■■□□ 2.33
CCDC85B-201ENST00000312579 PKD1L3Q7Z443 1732 aa29.58■■■□□ 2.33
CCDC85B-201ENST00000312579 CDCA7Q9BWT1 371 aaPredicted RBP29.58■■■□□ 2.33
CCDC85B-201ENST00000312579 ILDR2Q71H61 639 aa29.57■■■□□ 2.32
CCDC85B-201ENST00000312579 DDX54Q8TDD1 881 aaKnown RBP29.57■■■□□ 2.32
CCDC85B-201ENST00000312579 RIPK4P57078 832 aa29.56■■■□□ 2.32
CCDC85B-201ENST00000312579 HNRNPUQ00839 825 aaKnown RBP eCLIP29.56■■■□□ 2.32
CCDC85B-201ENST00000312579 GAS2L2Q8NHY3 880 aa29.56■■■□□ 2.32
CCDC85B-201ENST00000312579 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP29.56■■■□□ 2.32
CCDC85B-201ENST00000312579 THSD7AQ9UPZ6 1657 aa29.56■■■□□ 2.32
CCDC85B-201ENST00000312579 LRRC37A3O60309 1634 aa29.56■■■□□ 2.32
CCDC85B-201ENST00000312579 SHANK3Q9BYB0 1731 aa29.56■■■□□ 2.32
CCDC85B-201ENST00000312579 EXOC5O00471 708 aa29.55■■■□□ 2.32
CCDC85B-201ENST00000312579 CYP27B1O15528 508 aa29.55■■■□□ 2.32
CCDC85B-201ENST00000312579 ONECUT3O60422 494 aaPredicted RBP29.55■■■□□ 2.32
CCDC85B-201ENST00000312579 RXRBP28702 533 aa29.55■■■□□ 2.32
CCDC85B-201ENST00000312579 DDB1Q16531 1140 aa29.55■■■□□ 2.32
CCDC85B-201ENST00000312579 SEPT12Q8IYM1 358 aa29.55■■■□□ 2.32
CCDC85B-201ENST00000312579 TNS2Q63HR2 1409 aa29.53■■■□□ 2.32
CCDC85B-201ENST00000312579 PHKG2P15735 406 aa29.52■■■□□ 2.32
CCDC85B-201ENST00000312579 DLG5Q8TDM6 1919 aa29.52■■■□□ 2.32
CCDC85B-201ENST00000312579 C1orf141Q5JVX7 400 aa29.51■■■□□ 2.32
CCDC85B-201ENST00000312579 PCDH11XQ9BZA7 1347 aa29.51■■■□□ 2.31
CCDC85B-201ENST00000312579 PCDH11YQ9BZA8 1340 aa29.51■■■□□ 2.31
CCDC85B-201ENST00000312579 PLEKHG2Q9H7P9 1386 aa29.51■■■□□ 2.31
CCDC85B-201ENST00000312579 DCTN1Q14203 1278 aa29.5■■■□□ 2.31
CCDC85B-201ENST00000312579 TRIM35Q9UPQ4 493 aa29.5■■■□□ 2.31
CCDC85B-201ENST00000312579 AKAP4Q5JQC9 854 aa29.5■■■□□ 2.31
CCDC85B-201ENST00000312579 MAP3K5Q99683 1374 aa29.49■■■□□ 2.31
CCDC85B-201ENST00000312579 GNAT3A8MTJ3 354 aa29.49■■■□□ 2.31
CCDC85B-201ENST00000312579 MPRIPQ6WCQ1 1025 aa29.49■■■□□ 2.31
CCDC85B-201ENST00000312579 IFNL2Q8IZJ0 200 aa29.49■■■□□ 2.31
CCDC85B-201ENST00000312579 MARCH10Q8NA82 808 aaPredicted RBP29.49■■■□□ 2.31
CCDC85B-201ENST00000312579 THUMPD2Q9BTF0 503 aaKnown RBP29.49■■■□□ 2.31
CCDC85B-201ENST00000312579 MCM10Q7L590 875 aa29.48■■■□□ 2.31
CCDC85B-201ENST00000312579 FAM182BQ5T319 152 aa29.46■■■□□ 2.31
CCDC85B-201ENST00000312579 LGR6Q9HBX8 967 aa29.46■■■□□ 2.31
CCDC85B-201ENST00000312579 PDE3BQ13370 1112 aa29.45■■■□□ 2.31
CCDC85B-201ENST00000312579 IL17REQ8NFR9 667 aa29.45■■■□□ 2.3
CCDC85B-201ENST00000312579 RGS12O14924 1447 aa29.44■■■□□ 2.3
CCDC85B-201ENST00000312579 WWC1Q8IX03 1113 aa29.43■■■□□ 2.3
CCDC85B-201ENST00000312579 RTF1Q92541 710 aaKnown RBP29.43■■■□□ 2.3
CCDC85B-201ENST00000312579 KDM6AO15550 1401 aaPredicted RBP29.43■■■□□ 2.3
CCDC85B-201ENST00000312579 BRWD3Q6RI45 1802 aa29.43■■■□□ 2.3
CCDC85B-201ENST00000312579 RNMTO43148 476 aaKnown RBP29.41■■■□□ 2.3
CCDC85B-201ENST00000312579 NKX1-1Q15270 411 aaPredicted RBP29.4■■■□□ 2.3
CCDC85B-201ENST00000312579 LMOD3Q0VAK6 560 aa29.4■■■□□ 2.3
CCDC85B-201ENST00000312579 CCDC27Q2M243 656 aa29.4■■■□□ 2.3
CCDC85B-201ENST00000312579 HTATSF1O43719 755 aaKnown RBP29.39■■■□□ 2.3
CCDC85B-201ENST00000312579 ZNF521Q96K83 1311 aa29.38■■■□□ 2.29
CCDC85B-201ENST00000312579 HSP90AB1P08238 724 aaKnown RBP29.38■■■□□ 2.29
CCDC85B-201ENST00000312579 DCAF5Q96JK2 942 aa29.38■■■□□ 2.29
CCDC85B-201ENST00000312579 KRT27Q7Z3Y8 459 aa29.37■■■□□ 2.29
CCDC85B-201ENST00000312579 NCBP3Q53F19 620 aaKnown RBP29.36■■■□□ 2.29
CCDC85B-201ENST00000312579 VIRMAQ69YN4 1812 aaKnown RBP29.36■■■□□ 2.29
CCDC85B-201ENST00000312579 NGEFQ8N5V2 710 aa29.35■■■□□ 2.29
CCDC85B-201ENST00000312579 TOGARAM1Q9Y4F4 1720 aa29.35■■■□□ 2.29
CCDC85B-201ENST00000312579 ACSBG1Q96GR2 724 aa29.35■■■□□ 2.29
CCDC85B-201ENST00000312579 CEMIPQ8WUJ3 1361 aa29.34■■■□□ 2.29
CCDC85B-201ENST00000312579 SCN11AQ9UI33 1791 aa29.34■■■□□ 2.29
CCDC85B-201ENST00000312579 ZBED9Q6R2W3 1325 aa29.34■■■□□ 2.29
CCDC85B-201ENST00000312579 ADAMTS7Q9UKP4 1686 aa29.34■■■□□ 2.29
CCDC85B-201ENST00000312579 SPINK5Q9NQ38 1064 aaPredicted RBP29.32■■■□□ 2.28
CCDC85B-201ENST00000312579 LAS1LQ9Y4W2 734 aaKnown RBP29.31■■■□□ 2.28
CCDC85B-201ENST00000312579 NFATC2IPQ8NCF5 419 aa29.3■■■□□ 2.28
CCDC85B-201ENST00000312579 CDCA7LQ96GN5 454 aa29.3■■■□□ 2.28
CCDC85B-201ENST00000312579 MIS18AQ9NYP9 233 aa29.3■■■□□ 2.28
CCDC85B-201ENST00000312579 DOT1LQ8TEK3 1739 aa29.3■■■□□ 2.28
CCDC85B-201ENST00000312579 TEFQ10587 303 aa29.3■■■□□ 2.28
CCDC85B-201ENST00000312579 KAT6BQ8WYB5 2073 aa29.29■■■□□ 2.28
CCDC85B-201ENST00000312579 PRIM1P49642 420 aaKnown RBP29.29■■■□□ 2.28
CCDC85B-201ENST00000312579 CABP4P57796 275 aa29.29■■■□□ 2.28
CCDC85B-201ENST00000312579 WDR63Q8IWG1 891 aa29.29■■■□□ 2.28
CCDC85B-201ENST00000312579 SYTL4Q96C24 671 aaPredicted RBP29.29■■■□□ 2.28
CCDC85B-201ENST00000312579 SLC52A2Q9HAB3 445 aa29.29■■■□□ 2.28
CCDC85B-201ENST00000312579 KCNQ2O43526 872 aa29.28■■■□□ 2.28
CCDC85B-201ENST00000312579 ERVV-2B6SEH9 535 aa29.27■■■□□ 2.28
CCDC85B-201ENST00000312579 PTF1AQ7RTS3 328 aa29.27■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms