RNA–Protein interactions for RNA: ENST00000310260.7

VANGL1-201, Transcript of VANGL planar cell polarity protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VANGL1, Length 2,265 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VANGL1-201ENST00000310260 BCL9LQ86UU0 1499 aa16.41■□□□□ 0.22
VANGL1-201ENST00000310260 CDK12Q9NYV4 1490 aaPredicted RBP16.41■□□□□ 0.22
VANGL1-201ENST00000310260 SULT6B1Q6IMI4 303 aa16.41■□□□□ 0.22
VANGL1-201ENST00000310260 AEBP1Q8IUX7 1158 aa16.41■□□□□ 0.22
VANGL1-201ENST00000310260 SLIT2O94813 1529 aa16.4■□□□□ 0.22
VANGL1-201ENST00000310260 COL18A1P39060 1754 aa16.4■□□□□ 0.22
VANGL1-201ENST00000310260 ZNF772Q68DY9 489 aaPredicted RBP16.39■□□□□ 0.21
VANGL1-201ENST00000310260 FAM98CQ17RN3 349 aaKnown RBP16.39■□□□□ 0.21
VANGL1-201ENST00000310260 RGS17Q9UGC6 210 aaPredicted RBP16.39■□□□□ 0.21
VANGL1-201ENST00000310260 TRPC5Q9UL62 973 aaPredicted RBP16.39■□□□□ 0.21
VANGL1-201ENST00000310260 VPS72Q15906 364 aa16.38■□□□□ 0.21
VANGL1-201ENST00000310260 DDRGK1Q96HY6 314 aa16.38■□□□□ 0.21
VANGL1-201ENST00000310260 PLCH1Q4KWH8 1693 aa16.38■□□□□ 0.21
VANGL1-201ENST00000310260 CARD10Q9BWT7 1032 aa16.38■□□□□ 0.21
VANGL1-201ENST00000310260 ADAMTS8Q9UP79 889 aa16.38■□□□□ 0.21
VANGL1-201ENST00000310260 LMO7Q8WWI1 1683 aa16.37■□□□□ 0.21
VANGL1-201ENST00000310260 NFKBIBQ15653 356 aa16.37■□□□□ 0.21
VANGL1-201ENST00000310260 GJD4Q96KN9 370 aaPredicted RBP16.37■□□□□ 0.21
VANGL1-201ENST00000310260 CCDC146Q8IYE0 955 aa16.36■□□□□ 0.21
VANGL1-201ENST00000310260 TCP11L2Q8N4U5 519 aa16.36■□□□□ 0.21
VANGL1-201ENST00000310260 SPATA31A5Q5VU36 1347 aa16.36■□□□□ 0.21
VANGL1-201ENST00000310260 SPATA31A7Q8IWB4 1347 aa16.36■□□□□ 0.21
VANGL1-201ENST00000310260 POTEAQ6S8J7 498 aa16.36■□□□□ 0.21
VANGL1-201ENST00000310260 CRB1P82279 1406 aa16.36■□□□□ 0.21
VANGL1-201ENST00000310260 SPATA31A1Q5TZJ5 1347 aa16.36■□□□□ 0.21
VANGL1-201ENST00000310260 RAPGEF4Q8WZA2 1011 aa16.35■□□□□ 0.21
VANGL1-201ENST00000310260 FRAT1Q92837 279 aaPredicted RBP16.35■□□□□ 0.21
VANGL1-201ENST00000310260 COL3A1P02461 1466 aaPredicted RBP16.35■□□□□ 0.21
VANGL1-201ENST00000310260 RCAN3Q9UKA8 241 aa16.35■□□□□ 0.21
VANGL1-201ENST00000310260 PRKAR2BP31323 418 aa16.34■□□□□ 0.21
VANGL1-201ENST00000310260 IGSF1Q8N6C5 1336 aa16.34■□□□□ 0.21
VANGL1-201ENST00000310260 RGPD2P0DJD1 1756 aa16.33■□□□□ 0.21
VANGL1-201ENST00000310260 EIF5BO60841 1220 aaKnown RBP16.33■□□□□ 0.2
VANGL1-201ENST00000310260 RXRBP28702 533 aa16.33■□□□□ 0.2
VANGL1-201ENST00000310260 IL2RBP14784 551 aa16.32■□□□□ 0.2
VANGL1-201ENST00000310260 TATP17735 454 aaPredicted RBP16.32■□□□□ 0.2
VANGL1-201ENST00000310260 ABCC6O95255 1503 aa16.32■□□□□ 0.2
VANGL1-201ENST00000310260 NWD2Q9ULI1 1742 aa16.31■□□□□ 0.2
VANGL1-201ENST00000310260 DDX54Q8TDD1 881 aaKnown RBP16.31■□□□□ 0.2
VANGL1-201ENST00000310260 ATRNO75882 1429 aa16.31■□□□□ 0.2
VANGL1-201ENST00000310260 RBM6P78332 1123 aaKnown RBP16.3■□□□□ 0.2
VANGL1-201ENST00000310260 PHACTR3Q96KR7 559 aa16.3■□□□□ 0.2
VANGL1-201ENST00000310260 RSPH6AQ9H0K4 717 aa16.3■□□□□ 0.2
VANGL1-201ENST00000310260 FCHSD2O94868 740 aa16.3■□□□□ 0.2
VANGL1-201ENST00000310260 NEUROD2Q15784 382 aa16.3■□□□□ 0.2
VANGL1-201ENST00000310260 NRAPQ86VF7 1730 aa16.3■□□□□ 0.2
VANGL1-201ENST00000310260 SEPT12Q8IYM1 358 aa16.29■□□□□ 0.2
VANGL1-201ENST00000310260 THRAP3Q9Y2W1 955 aaKnown RBP16.29■□□□□ 0.2
VANGL1-201ENST00000310260 SKAP1Q86WV1 359 aa16.28■□□□□ 0.2
VANGL1-201ENST00000310260 RRP7AQ9Y3A4 280 aaKnown RBP16.28■□□□□ 0.2
VANGL1-201ENST00000310260 MAPK8IP3Q9UPT6 1336 aa16.28■□□□□ 0.2
VANGL1-201ENST00000310260 EXOC5O00471 708 aa16.28■□□□□ 0.2
VANGL1-201ENST00000310260 FAM182BQ5T319 152 aa16.28■□□□□ 0.2
VANGL1-201ENST00000310260 FAM43AQ8N2R8 423 aa16.28■□□□□ 0.2
VANGL1-201ENST00000310260 DDB1Q16531 1140 aa16.27■□□□□ 0.2
VANGL1-201ENST00000310260 BARGINQ6ZT62 677 aa16.27■□□□□ 0.2
VANGL1-201ENST00000310260 ZCRB1Q8TBF4 217 aaKnown RBP16.27■□□□□ 0.2
VANGL1-201ENST00000310260 PLEKHO1Q53GL0 409 aaPredicted RBP16.26■□□□□ 0.19
VANGL1-201ENST00000310260 MEGF6O75095 1541 aa16.26■□□□□ 0.19
VANGL1-201ENST00000310260 PNNQ9H307 717 aaKnown RBP16.26■□□□□ 0.19
VANGL1-201ENST00000310260 VIRMAQ69YN4 1812 aaKnown RBP16.25■□□□□ 0.19
VANGL1-201ENST00000310260 PDE3BQ13370 1112 aa16.25■□□□□ 0.19
VANGL1-201ENST00000310260 MTHFSDQ2M296 383 aaKnown RBP16.25■□□□□ 0.19
VANGL1-201ENST00000310260 ZNF530Q6P9A1 599 aaPredicted RBP16.25■□□□□ 0.19
VANGL1-201ENST00000310260 SPG7Q9UQ90 795 aa16.25■□□□□ 0.19
VANGL1-201ENST00000310260 APAF1O14727 1248 aa16.25■□□□□ 0.19
VANGL1-201ENST00000310260 SLC4A3P48751 1232 aa16.25■□□□□ 0.19
VANGL1-201ENST00000310260 RUNDC1Q96C34 613 aa16.25■□□□□ 0.19
VANGL1-201ENST00000310260 PLEKHF1Q96S99 279 aa16.25■□□□□ 0.19
VANGL1-201ENST00000310260 KDRP35968 1356 aa16.25■□□□□ 0.19
VANGL1-201ENST00000310260 CDCA7Q9BWT1 371 aaPredicted RBP16.24■□□□□ 0.19
VANGL1-201ENST00000310260 GLI3P10071 1580 aa16.23■□□□□ 0.19
VANGL1-201ENST00000310260 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.23■□□□□ 0.19
VANGL1-201ENST00000310260 C1orf141Q5JVX7 400 aa16.22■□□□□ 0.19
VANGL1-201ENST00000310260 RGPD1P0DJD0 1748 aa16.22■□□□□ 0.19
VANGL1-201ENST00000310260 AMOTQ4VCS5 1084 aa16.22■□□□□ 0.19
VANGL1-201ENST00000310260 FAM208AQ9UK61 1670 aaKnown RBP16.22■□□□□ 0.19
VANGL1-201ENST00000310260 KDM2BQ8NHM5 1336 aa16.21■□□□□ 0.19
VANGL1-201ENST00000310260 CYP27B1O15528 508 aa16.21■□□□□ 0.19
VANGL1-201ENST00000310260 ONECUT3O60422 494 aaPredicted RBP16.21■□□□□ 0.19
VANGL1-201ENST00000310260 RIPK4P57078 832 aa16.2■□□□□ 0.18
VANGL1-201ENST00000310260 MPRIPQ6WCQ1 1025 aa16.2■□□□□ 0.18
VANGL1-201ENST00000310260 MARCH10Q8NA82 808 aaPredicted RBP16.2■□□□□ 0.18
VANGL1-201ENST00000310260 CRBNQ96SW2 442 aa16.2■□□□□ 0.18
VANGL1-201ENST00000310260 OVOS2A0A0G2JMS6 1433 aa16.2■□□□□ 0.18
VANGL1-201ENST00000310260 FRAT2O75474 233 aaPredicted RBP16.2■□□□□ 0.18
VANGL1-201ENST00000310260 DCTN1Q14203 1278 aa16.2■□□□□ 0.18
VANGL1-201ENST00000310260 NCAPD2Q15021 1401 aa16.2■□□□□ 0.18
VANGL1-201ENST00000310260 DISP2A7MBM2 1401 aa16.19■□□□□ 0.18
VANGL1-201ENST00000310260 PLIN1O60240 522 aa16.19■□□□□ 0.18
VANGL1-201ENST00000310260 TMPOP42166 694 aaKnown RBP16.19■□□□□ 0.18
VANGL1-201ENST00000310260 NFE2L2Q16236 605 aa16.19■□□□□ 0.18
VANGL1-201ENST00000310260 KRT27Q7Z3Y8 459 aa16.19■□□□□ 0.18
VANGL1-201ENST00000310260 GAS2L2Q8NHY3 880 aa16.19■□□□□ 0.18
VANGL1-201ENST00000310260 IFNL2Q8IZJ0 200 aa16.19■□□□□ 0.18
VANGL1-201ENST00000310260 PCDH11XQ9BZA7 1347 aa16.18■□□□□ 0.18
VANGL1-201ENST00000310260 PCDH11YQ9BZA8 1340 aa16.18■□□□□ 0.18
VANGL1-201ENST00000310260 MCM10Q7L590 875 aa16.18■□□□□ 0.18
VANGL1-201ENST00000310260 SYTL4Q96C24 671 aaPredicted RBP16.18■□□□□ 0.18
VANGL1-201ENST00000310260 CDCA7LQ96GN5 454 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms