RNA–Protein interactions for RNA: ENST00000310232.10

CCDC13-201, Transcript of coiled-coil domain containing 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC13, Length 2,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC13-201ENST00000310232 IFT57Q9NWB7 429 aa16.56■□□□□ 0.24
CCDC13-201ENST00000310232 MSH6P52701 1360 aa16.55■□□□□ 0.24
CCDC13-201ENST00000310232 PIK3R4Q99570 1358 aa16.55■□□□□ 0.24
CCDC13-201ENST00000310232 SLC4A10Q6U841 1118 aa16.55■□□□□ 0.24
CCDC13-201ENST00000310232 ARHGAP45Q92619 1136 aa16.55■□□□□ 0.24
CCDC13-201ENST00000310232 POGZQ7Z3K3 1410 aa16.54■□□□□ 0.24
CCDC13-201ENST00000310232 NUTM2FA1L443 756 aa16.54■□□□□ 0.24
CCDC13-201ENST00000310232 OFD1O75665 1012 aa16.54■□□□□ 0.24
CCDC13-201ENST00000310232 CEP85Q6P2H3 762 aa16.54■□□□□ 0.24
CCDC13-201ENST00000310232 BRPF1P55201 1214 aaPredicted RBP16.54■□□□□ 0.24
CCDC13-201ENST00000310232 CFAP44Q96MT7 982 aa16.54■□□□□ 0.24
CCDC13-201ENST00000310232 KIF20BQ96Q89 1820 aa16.54■□□□□ 0.24
CCDC13-201ENST00000310232 ZNF445P59923 1031 aa16.53■□□□□ 0.24
CCDC13-201ENST00000310232 CLEC17AQ6ZS10 378 aa16.53■□□□□ 0.24
CCDC13-201ENST00000310232 NEK4P51957 841 aa16.52■□□□□ 0.24
CCDC13-201ENST00000310232 INTS3Q68E01 1043 aaKnown RBP16.52■□□□□ 0.24
CCDC13-201ENST00000310232 ATP10DQ9P241 1426 aa16.52■□□□□ 0.24
CCDC13-201ENST00000310232 PALD1Q9ULE6 856 aa16.52■□□□□ 0.24
CCDC13-201ENST00000310232 EXOC6BQ9Y2D4 811 aa16.52■□□□□ 0.24
CCDC13-201ENST00000310232 NUCB2P80303 420 aa16.52■□□□□ 0.24
CCDC13-201ENST00000310232 STAG3Q9UJ98 1225 aa16.52■□□□□ 0.24
CCDC13-201ENST00000310232 TCHHQ07283 1943 aa16.52■□□□□ 0.23
CCDC13-201ENST00000310232 TPM2P07951 284 aa16.52■□□□□ 0.23
CCDC13-201ENST00000310232 G2E3Q7L622 706 aa16.52■□□□□ 0.23
CCDC13-201ENST00000310232 API5Q9BZZ5 524 aaKnown RBP16.52■□□□□ 0.23
CCDC13-201ENST00000310232 RIMS2Q9UQ26 1411 aa16.51■□□□□ 0.23
CCDC13-201ENST00000310232 LARP6Q9BRS8 491 aaKnown RBP16.51■□□□□ 0.23
CCDC13-201ENST00000310232 ANKRD44Q8N8A2 993 aa16.51■□□□□ 0.23
CCDC13-201ENST00000310232 TSC1Q92574 1164 aa16.51■□□□□ 0.23
CCDC13-201ENST00000310232 NECTIN2Q92692 538 aa16.51■□□□□ 0.23
CCDC13-201ENST00000310232 ZNF830Q96NB3 372 aaPredicted RBP16.5■□□□□ 0.23
CCDC13-201ENST00000310232 UPF3BQ9BZI7 483 aaKnown RBP16.5■□□□□ 0.23
CCDC13-201ENST00000310232 SULT6B1Q6IMI4 303 aa16.49■□□□□ 0.23
CCDC13-201ENST00000310232 UQCRHLA0A096LP55 91 aa16.49■□□□□ 0.23
CCDC13-201ENST00000310232 ST18O60284 1047 aa16.49■□□□□ 0.23
CCDC13-201ENST00000310232 UQCRHP07919 91 aa16.49■□□□□ 0.23
CCDC13-201ENST00000310232 PTMSP20962 102 aa16.49■□□□□ 0.23
CCDC13-201ENST00000310232 ZNF428Q96B54 188 aa16.49■□□□□ 0.23
CCDC13-201ENST00000310232 FOXO3O43524 673 aa16.49■□□□□ 0.23
CCDC13-201ENST00000310232 TMX3Q96JJ7 454 aa16.49■□□□□ 0.23
CCDC13-201ENST00000310232 ARHGEF40Q8TER5 1519 aa16.48■□□□□ 0.23
CCDC13-201ENST00000310232 RTL1A6NKG5 1358 aa16.48■□□□□ 0.23
CCDC13-201ENST00000310232 RGS12O14924 1447 aa16.48■□□□□ 0.23
CCDC13-201ENST00000310232 GADD45BO75293 160 aaPredicted RBP16.48■□□□□ 0.23
CCDC13-201ENST00000310232 SLC4A2P04920 1241 aa16.48■□□□□ 0.23
CCDC13-201ENST00000310232 C17orf53Q8N3J3 647 aaPredicted RBP16.48■□□□□ 0.23
CCDC13-201ENST00000310232 NOL7Q9UMY1 257 aaKnown RBP16.48■□□□□ 0.23
CCDC13-201ENST00000310232 ZFYVE9O95405 1425 aa16.47■□□□□ 0.23
CCDC13-201ENST00000310232 FAM177BA6PVY3 158 aa16.47■□□□□ 0.23
CCDC13-201ENST00000310232 PDLIM2Q96JY6 352 aa16.47■□□□□ 0.23
CCDC13-201ENST00000310232 IL25Q9H293 177 aa16.47■□□□□ 0.23
CCDC13-201ENST00000310232 IBTKQ9P2D0 1353 aaPredicted RBP16.47■□□□□ 0.23
CCDC13-201ENST00000310232 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.47■□□□□ 0.23
CCDC13-201ENST00000310232 TXNDC2Q86VQ3 553 aa16.47■□□□□ 0.23
CCDC13-201ENST00000310232 PDCL3Q9H2J4 239 aa16.47■□□□□ 0.23
CCDC13-201ENST00000310232 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.46■□□□□ 0.23
CCDC13-201ENST00000310232 CHMP4BQ9H444 224 aaKnown RBP16.46■□□□□ 0.23
CCDC13-201ENST00000310232 YEATS2Q9ULM3 1422 aa16.46■□□□□ 0.23
CCDC13-201ENST00000310232 MAP4K4O95819 1239 aaPredicted RBP16.46■□□□□ 0.23
CCDC13-201ENST00000310232 RILPL2Q969X0 211 aa16.46■□□□□ 0.23
CCDC13-201ENST00000310232 LRSAM1Q6UWE0 723 aa16.46■□□□□ 0.22
CCDC13-201ENST00000310232 ERC2O15083 957 aa16.45■□□□□ 0.22
CCDC13-201ENST00000310232 NPM1P06748 294 aaKnown RBP eCLIP16.45■□□□□ 0.22
CCDC13-201ENST00000310232 UNC5CLQ8IV45 518 aa16.45■□□□□ 0.22
CCDC13-201ENST00000310232 PDE1AP54750 535 aa16.45■□□□□ 0.22
CCDC13-201ENST00000310232 CDC42BPGQ6DT37 1551 aa16.44■□□□□ 0.22
CCDC13-201ENST00000310232 ANO2Q9NQ90 1003 aa16.44■□□□□ 0.22
CCDC13-201ENST00000310232 ZKSCAN5Q9Y2L8 839 aa16.44■□□□□ 0.22
CCDC13-201ENST00000310232 CPS1P31327 1500 aa16.44■□□□□ 0.22
CCDC13-201ENST00000310232 MLH3Q9UHC1 1453 aa16.44■□□□□ 0.22
CCDC13-201ENST00000310232 PRDM10Q9NQV6 1147 aa16.44■□□□□ 0.22
CCDC13-201ENST00000310232 ALKQ9UM73 1620 aa16.43■□□□□ 0.22
CCDC13-201ENST00000310232 TRIM6-TRIM34B2RNG4 842 aa16.43■□□□□ 0.22
CCDC13-201ENST00000310232 CASC1Q6TDU7 716 aa16.43■□□□□ 0.22
CCDC13-201ENST00000310232 COG3Q96JB2 828 aa16.43■□□□□ 0.22
CCDC13-201ENST00000310232 HSP90AB2PQ58FF8 381 aa16.42■□□□□ 0.22
CCDC13-201ENST00000310232 PTMAP06454 111 aaKnown RBP16.42■□□□□ 0.22
CCDC13-201ENST00000310232 MLECQ14165 292 aa16.42■□□□□ 0.22
CCDC13-201ENST00000310232 EIF4A2Q14240 407 aaKnown RBP16.42■□□□□ 0.22
CCDC13-201ENST00000310232 SLC52A1Q9NWF4 448 aa16.42■□□□□ 0.22
CCDC13-201ENST00000310232 TMEM131LA2VDJ0 1609 aa16.42■□□□□ 0.22
CCDC13-201ENST00000310232 PNMA6EA0A0J9YXQ4 647 aa16.42■□□□□ 0.22
CCDC13-201ENST00000310232 REC8O95072 547 aa16.42■□□□□ 0.22
CCDC13-201ENST00000310232 RPAP2Q8IXW5 612 aaPredicted RBP16.42■□□□□ 0.22
CCDC13-201ENST00000310232 CWC22Q9HCG8 908 aaKnown RBP16.42■□□□□ 0.22
CCDC13-201ENST00000310232 CLTCQ00610 1675 aaKnown RBP16.41■□□□□ 0.22
CCDC13-201ENST00000310232 ZNF500O60304 480 aaPredicted RBP16.41■□□□□ 0.22
CCDC13-201ENST00000310232 IL1RAPL2Q9NP60 686 aa16.41■□□□□ 0.22
CCDC13-201ENST00000310232 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.4■□□□□ 0.22
CCDC13-201ENST00000310232 OSCARQ8IYS5 282 aa16.39■□□□□ 0.21
CCDC13-201ENST00000310232 NUDT16Q96DE0 195 aaKnown RBP16.39■□□□□ 0.21
CCDC13-201ENST00000310232 PLCB2Q00722 1185 aa16.39■□□□□ 0.21
CCDC13-201ENST00000310232 ESYT1Q9BSJ8 1104 aa16.39■□□□□ 0.21
CCDC13-201ENST00000310232 USP25Q9UHP3 1055 aa16.39■□□□□ 0.21
CCDC13-201ENST00000310232 CHL1O00533 1208 aa16.38■□□□□ 0.21
CCDC13-201ENST00000310232 BRD1O95696 1058 aa16.38■□□□□ 0.21
CCDC13-201ENST00000310232 CPA1P15085 419 aa16.38■□□□□ 0.21
CCDC13-201ENST00000310232 LMOD3Q0VAK6 560 aa16.38■□□□□ 0.21
CCDC13-201ENST00000310232 TTC12Q9H892 705 aaPredicted RBP16.38■□□□□ 0.21
CCDC13-201ENST00000310232 ARHGAP31Q2M1Z3 1444 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms