RNA–Protein interactions for RNA: ENST00000309890.11

ATP2A3-201, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3, humanhuman

TSL 5 BASIC

Gene ATP2A3, Length 4,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3-201ENST00000309890 ME1P48163 572 aa21.3■■□□□ 1
ATP2A3-201ENST00000309890 GNAT3A8MTJ3 354 aa21.3■■□□□ 1
ATP2A3-201ENST00000309890 EMILIN1Q9Y6C2 1016 aa21.3■■□□□ 1
ATP2A3-201ENST00000309890 HSP90B2PQ58FF3 399 aa21.3■■□□□ 1
ATP2A3-201ENST00000309890 ESCO1Q5FWF5 840 aa21.29■■□□□ 1
ATP2A3-201ENST00000309890 WAPLQ7Z5K2 1190 aa21.29■■□□□ 1
ATP2A3-201ENST00000309890 BRMS1Q9HCU9 246 aa21.29■■□□□ 1
ATP2A3-201ENST00000309890 RAPGEF6Q8TEU7 1601 aa21.29■■□□□ 1
ATP2A3-201ENST00000309890 NUP153P49790 1475 aaKnown RBP21.29■■□□□ 1
ATP2A3-201ENST00000309890 NUTM1Q86Y26 1132 aa21.29■■□□□ 1
ATP2A3-201ENST00000309890 ATF3P18847 181 aa21.28■■□□□ 1
ATP2A3-201ENST00000309890 NME9Q86XW9 330 aa21.28■■□□□ 1
ATP2A3-201ENST00000309890 ARHGAP45Q92619 1136 aa21.28■■□□□ 1
ATP2A3-201ENST00000309890 BCL11BQ9C0K0 894 aaPredicted RBP21.28■■□□□ 1
ATP2A3-201ENST00000309890 ANKRD36BQ8N2N9 1353 aa21.28■■□□□ 1
ATP2A3-201ENST00000309890 CASTP20810 708 aaKnown RBP21.28■■□□□ 1
ATP2A3-201ENST00000309890 VPS53Q5VIR6 699 aa21.28■■□□□ 1
ATP2A3-201ENST00000309890 PTPRCP08575 1304 aa21.28■■□□□ 1
ATP2A3-201ENST00000309890 MIS18AQ9NYP9 233 aa21.28■■□□□ 1
ATP2A3-201ENST00000309890 BAG4O95429 457 aaKnown RBP21.27■■□□□ 1
ATP2A3-201ENST00000309890 MAP3K11Q16584 847 aa21.27■■□□□ 1
ATP2A3-201ENST00000309890 ARHGEF12Q9NZN5 1544 aa21.27■■□□□ 1
ATP2A3-201ENST00000309890 ITSN2Q9NZM3 1697 aa21.27■■□□□ 1
ATP2A3-201ENST00000309890 NUCB1Q02818 461 aa21.27■■□□□ 1
ATP2A3-201ENST00000309890 KLHL40Q2TBA0 621 aa21.27■■□□□ 1
ATP2A3-201ENST00000309890 TATP17735 454 aaPredicted RBP21.27■■□□□ 1
ATP2A3-201ENST00000309890 THEMISQ8N1K5 641 aaPredicted RBP21.27■■□□□ 1
ATP2A3-201ENST00000309890 POLR3AO14802 1390 aaPredicted RBP21.27■□□□□ 0.99
ATP2A3-201ENST00000309890 PER1O15534 1290 aaPredicted RBP21.26■□□□□ 0.99
ATP2A3-201ENST00000309890 CCDC158Q5M9N0 1113 aa21.26■□□□□ 0.99
ATP2A3-201ENST00000309890 SYTL4Q96C24 671 aaPredicted RBP21.26■□□□□ 0.99
ATP2A3-201ENST00000309890 ZNF608Q9ULD9 1512 aaPredicted RBP21.26■□□□□ 0.99
ATP2A3-201ENST00000309890 CCDC183Q5T5S1 534 aa21.26■□□□□ 0.99
ATP2A3-201ENST00000309890 SETQ01105 290 aaPredicted RBP21.26■□□□□ 0.99
ATP2A3-201ENST00000309890 IDI1Q13907 227 aa21.26■□□□□ 0.99
ATP2A3-201ENST00000309890 CEP57L1Q8IYX8 460 aa21.25■□□□□ 0.99
ATP2A3-201ENST00000309890 SLC26A8Q96RN1 970 aa21.25■□□□□ 0.99
ATP2A3-201ENST00000309890 CTTNBP2Q8WZ74 1663 aa21.25■□□□□ 0.99
ATP2A3-201ENST00000309890 PIK3C2GO75747 1445 aa21.25■□□□□ 0.99
ATP2A3-201ENST00000309890 CCDC66A2RUB6 948 aa21.25■□□□□ 0.99
ATP2A3-201ENST00000309890 SH2B1Q9NRF2 756 aaPredicted RBP21.25■□□□□ 0.99
ATP2A3-201ENST00000309890 BTBD11A6QL63 1104 aa21.24■□□□□ 0.99
ATP2A3-201ENST00000309890 FILIP1LQ4L180 1135 aa21.23■□□□□ 0.99
ATP2A3-201ENST00000309890 ATP2B1P20020 1258 aa21.23■□□□□ 0.99
ATP2A3-201ENST00000309890 CCDC83Q8IWF9 413 aa21.23■□□□□ 0.99
ATP2A3-201ENST00000309890 F6X3S4 739 aa21.23■□□□□ 0.99
ATP2A3-201ENST00000309890 TTC22Q5TAA0 569 aa21.23■□□□□ 0.99
ATP2A3-201ENST00000309890 RNF123Q5XPI4 1314 aa21.23■□□□□ 0.99
ATP2A3-201ENST00000309890 SCAND2PQ9GZW5 306 aaPredicted RBP21.22■□□□□ 0.99
ATP2A3-201ENST00000309890 SERPINC1P01008 464 aa21.22■□□□□ 0.99
ATP2A3-201ENST00000309890 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.22■□□□□ 0.996e-7■■■□□ 18.7
ATP2A3-201ENST00000309890 MBIPQ9NS73 344 aa21.22■□□□□ 0.99
ATP2A3-201ENST00000309890 FERMT3Q86UX7 667 aa21.21■□□□□ 0.99
ATP2A3-201ENST00000309890 LIMCH1Q9UPQ0 1083 aa21.21■□□□□ 0.99
ATP2A3-201ENST00000309890 ATP10BO94823 1461 aa21.21■□□□□ 0.99
ATP2A3-201ENST00000309890 TAF7Q15545 349 aaPredicted RBP21.21■□□□□ 0.99
ATP2A3-201ENST00000309890 TTC39AQ5SRH9 613 aa21.21■□□□□ 0.99
ATP2A3-201ENST00000309890 WASLO00401 505 aaPredicted RBP21.21■□□□□ 0.99
ATP2A3-201ENST00000309890 SNX21Q969T3 373 aa21.21■□□□□ 0.99
ATP2A3-201ENST00000309890 CD109Q6YHK3 1445 aa21.21■□□□□ 0.99
ATP2A3-201ENST00000309890 MCM5P33992 734 aa21.21■□□□□ 0.99
ATP2A3-201ENST00000309890 DNAJC5BQ9UF47 199 aa21.21■□□□□ 0.99
ATP2A3-201ENST00000309890 CTNNA3Q9UI47 895 aa21.2■□□□□ 0.98
ATP2A3-201ENST00000309890 PRPF40BQ6NWY9 871 aaKnown RBP21.2■□□□□ 0.98
ATP2A3-201ENST00000309890 XRCC6P12956 609 aaKnown RBP eCLIP21.2■□□□□ 0.981e-8■■□□□ 12.6
ATP2A3-201ENST00000309890 FILIP1Q7Z7B0 1213 aa21.19■□□□□ 0.98
ATP2A3-201ENST00000309890 ERCC4Q92889 916 aaPredicted RBP21.19■□□□□ 0.98
ATP2A3-201ENST00000309890 SMARCE1Q969G3 411 aa21.19■□□□□ 0.98
ATP2A3-201ENST00000309890 RUFY1Q96T51 708 aa21.19■□□□□ 0.98
ATP2A3-201ENST00000309890 DUOX2Q9NRD8 1548 aa21.19■□□□□ 0.98
ATP2A3-201ENST00000309890 AK7Q96M32 723 aa21.19■□□□□ 0.98
ATP2A3-201ENST00000309890 LRRFIP2Q9Y608 721 aaKnown RBP21.19■□□□□ 0.98
ATP2A3-201ENST00000309890 MYL6BP14649 208 aa21.18■□□□□ 0.98
ATP2A3-201ENST00000309890 PIP4K2AP48426 406 aaPredicted RBP21.18■□□□□ 0.98
ATP2A3-201ENST00000309890 PKNOX2Q96KN3 472 aa21.18■□□□□ 0.98
ATP2A3-201ENST00000309890 SPG7Q9UQ90 795 aa21.18■□□□□ 0.98
ATP2A3-201ENST00000309890 EIF2AK4Q9P2K8 1649 aaKnown RBP21.18■□□□□ 0.98
ATP2A3-201ENST00000309890 KDM4AO75164 1064 aa21.18■□□□□ 0.98
ATP2A3-201ENST00000309890 XPCQ01831 940 aaPredicted RBP21.18■□□□□ 0.98
ATP2A3-201ENST00000309890 FLIIQ13045 1269 aa21.18■□□□□ 0.98
ATP2A3-201ENST00000309890 TRIM22Q8IYM9 498 aa21.18■□□□□ 0.98
ATP2A3-201ENST00000309890 CLCN1P35523 988 aa21.17■□□□□ 0.98
ATP2A3-201ENST00000309890 KIF6Q6ZMV9 814 aa21.17■□□□□ 0.98
ATP2A3-201ENST00000309890 UHRF1BP1Q6BDS2 1440 aa21.17■□□□□ 0.98
ATP2A3-201ENST00000309890 CEP126Q9P2H0 1117 aa21.17■□□□□ 0.98
ATP2A3-201ENST00000309890 DACH1Q9UI36 760 aa21.17■□□□□ 0.98
ATP2A3-201ENST00000309890 CBFA2T2O43439 604 aa21.17■□□□□ 0.98
ATP2A3-201ENST00000309890 PDE4CQ08493 712 aa21.17■□□□□ 0.98
ATP2A3-201ENST00000309890 PZPP20742 1482 aa21.17■□□□□ 0.98
ATP2A3-201ENST00000309890 KDM5BQ9UGL1 1544 aa21.17■□□□□ 0.98
ATP2A3-201ENST00000309890 RLBP1P12271 317 aa21.16■□□□□ 0.98
ATP2A3-201ENST00000309890 FANCAO15360 1455 aa21.16■□□□□ 0.98
ATP2A3-201ENST00000309890 CABP4P57796 275 aa21.16■□□□□ 0.98
ATP2A3-201ENST00000309890 NOM1Q5C9Z4 860 aaKnown RBP21.16■□□□□ 0.98
ATP2A3-201ENST00000309890 CNNM1Q9NRU3 951 aa21.16■□□□□ 0.98
ATP2A3-201ENST00000309890 CWC15Q9P013 229 aaKnown RBP21.16■□□□□ 0.98
ATP2A3-201ENST00000309890 CDKL5O76039 1030 aa21.15■□□□□ 0.98
ATP2A3-201ENST00000309890 RRP12Q5JTH9 1297 aaKnown RBP21.15■□□□□ 0.98
ATP2A3-201ENST00000309890 USP25Q9UHP3 1055 aa21.15■□□□□ 0.98
ATP2A3-201ENST00000309890 FYB1O15117 783 aa21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 117.8 ms