RNA–Protein interactions for RNA: ENST00000309836.9

SPIRE1-201, Transcript of spire type actin nucleation factor 1, humanhuman

TSL 2 BASIC

Gene SPIRE1, Length 1,877 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-201ENST00000309836 SNX21Q969T3 373 aa19.01■□□□□ 0.63
SPIRE1-201ENST00000309836 PIK3C2AO00443 1686 aa19.01■□□□□ 0.63
SPIRE1-201ENST00000309836 KIF2CQ99661 725 aa19.01■□□□□ 0.63
SPIRE1-201ENST00000309836 DCTPP1Q9H773 170 aa19.01■□□□□ 0.63
SPIRE1-201ENST00000309836 EID1Q9Y6B2 187 aa19.01■□□□□ 0.63
SPIRE1-201ENST00000309836 SBNO1A3KN83 1393 aa19■□□□□ 0.63
SPIRE1-201ENST00000309836 MSH6P52701 1360 aa19■□□□□ 0.63
SPIRE1-201ENST00000309836 ANKRD44Q8N8A2 993 aa18.99■□□□□ 0.63
SPIRE1-201ENST00000309836 TBX22Q9Y458 520 aa18.99■□□□□ 0.63
SPIRE1-201ENST00000309836 CEP170BQ9Y4F5 1589 aaPredicted RBP18.99■□□□□ 0.63
SPIRE1-201ENST00000309836 FLT4P35916 1363 aa18.99■□□□□ 0.63
SPIRE1-201ENST00000309836 FOXO3O43524 673 aa18.99■□□□□ 0.63
SPIRE1-201ENST00000309836 GSPT1P15170 499 aaKnown RBP18.99■□□□□ 0.63
SPIRE1-201ENST00000309836 DDIT3P35638 169 aa18.99■□□□□ 0.63
SPIRE1-201ENST00000309836 HAP1P54257 671 aaPredicted RBP18.99■□□□□ 0.63
SPIRE1-201ENST00000309836 PLEKHM2Q8IWE5 1019 aa18.99■□□□□ 0.63
SPIRE1-201ENST00000309836 XRN1Q8IZH2 1706 aaKnown RBP18.98■□□□□ 0.63
SPIRE1-201ENST00000309836 MCM4P33991 863 aa18.98■□□□□ 0.63
SPIRE1-201ENST00000309836 MTHFSDQ2M296 383 aaKnown RBP18.98■□□□□ 0.63
SPIRE1-201ENST00000309836 PTPRCP08575 1304 aa18.98■□□□□ 0.63
SPIRE1-201ENST00000309836 KDRP35968 1356 aa18.97■□□□□ 0.63
SPIRE1-201ENST00000309836 RTL1A6NKG5 1358 aa18.97■□□□□ 0.63
SPIRE1-201ENST00000309836 CEP85Q6P2H3 762 aa18.97■□□□□ 0.63
SPIRE1-201ENST00000309836 RTN4Q9NQC3 1192 aaKnown RBP18.97■□□□□ 0.63
SPIRE1-201ENST00000309836 MIS18AQ9NYP9 233 aa18.97■□□□□ 0.63
SPIRE1-201ENST00000309836 CDC45O75419 566 aa18.96■□□□□ 0.63
SPIRE1-201ENST00000309836 MARF1Q9Y4F3 1742 aaKnown RBP18.96■□□□□ 0.63
SPIRE1-201ENST00000309836 LRRC37A3O60309 1634 aa18.95■□□□□ 0.62
SPIRE1-201ENST00000309836 IGSF1Q8N6C5 1336 aa18.95■□□□□ 0.62
SPIRE1-201ENST00000309836 C16orf71Q8IYS4 520 aaPredicted RBP18.94■□□□□ 0.62
SPIRE1-201ENST00000309836 NGDNQ8NEJ9 315 aaKnown RBP18.94■□□□□ 0.62
SPIRE1-201ENST00000309836 EYA1Q99502 592 aa18.94■□□□□ 0.62
SPIRE1-201ENST00000309836 MEIS3Q99687 375 aa18.94■□□□□ 0.62
SPIRE1-201ENST00000309836 FER1L4A9Z1Z3 1794 aa18.94■□□□□ 0.62
SPIRE1-201ENST00000309836 TTC22Q5TAA0 569 aa18.94■□□□□ 0.62
SPIRE1-201ENST00000309836 RPAP2Q8IXW5 612 aaPredicted RBP18.94■□□□□ 0.62
SPIRE1-201ENST00000309836 CD2BP2O95400 341 aaKnown RBP18.92■□□□□ 0.62
SPIRE1-201ENST00000309836 SLC4A2P04920 1241 aa18.92■□□□□ 0.62
SPIRE1-201ENST00000309836 G2E3Q7L622 706 aa18.92■□□□□ 0.62
SPIRE1-201ENST00000309836 OTUD7AQ8TE49 926 aaPredicted RBP18.92■□□□□ 0.62
SPIRE1-201ENST00000309836 TSPYL4Q9UJ04 414 aa18.92■□□□□ 0.62
SPIRE1-201ENST00000309836 NWD1Q149M9 1564 aa18.92■□□□□ 0.62
SPIRE1-201ENST00000309836 USP54Q70EL1 1684 aa18.92■□□□□ 0.62
SPIRE1-201ENST00000309836 AMPHP49418 695 aa18.92■□□□□ 0.62
SPIRE1-201ENST00000309836 PLPPR3Q6T4P5 718 aa18.92■□□□□ 0.62
SPIRE1-201ENST00000309836 ANKARQ7Z5J8 1434 aa18.91■□□□□ 0.62
SPIRE1-201ENST00000309836 HSP90AB1P08238 724 aaKnown RBP18.9■□□□□ 0.62
SPIRE1-201ENST00000309836 RTF1Q92541 710 aaKnown RBP18.9■□□□□ 0.62
SPIRE1-201ENST00000309836 RBM42Q9BTD8 480 aaKnown RBP18.9■□□□□ 0.62
SPIRE1-201ENST00000309836 GAS2L2Q8NHY3 880 aa18.9■□□□□ 0.62
SPIRE1-201ENST00000309836 FAM208AQ9UK61 1670 aaKnown RBP18.89■□□□□ 0.61
SPIRE1-201ENST00000309836 SMARCA5O60264 1052 aaPredicted RBP18.89■□□□□ 0.61
SPIRE1-201ENST00000309836 CIZ1Q9ULV3 898 aaPredicted RBP18.88■□□□□ 0.61
SPIRE1-201ENST00000309836 F6X3S4 739 aa18.88■□□□□ 0.61
SPIRE1-201ENST00000309836 THEMISQ8N1K5 641 aaPredicted RBP18.88■□□□□ 0.61
SPIRE1-201ENST00000309836 NLRP6P59044 892 aa18.87■□□□□ 0.61
SPIRE1-201ENST00000309836 K7ELQ4 463 aaPredicted RBP18.86■□□□□ 0.61
SPIRE1-201ENST00000309836 TRAK2O60296 914 aa18.86■□□□□ 0.61
SPIRE1-201ENST00000309836 HOXC9P31274 260 aa18.86■□□□□ 0.61
SPIRE1-201ENST00000309836 HTATSF1O43719 755 aaKnown RBP18.86■□□□□ 0.61
SPIRE1-201ENST00000309836 KCNA6P17658 529 aa18.86■□□□□ 0.61
SPIRE1-201ENST00000309836 CCT4P50991 539 aaKnown RBP18.86■□□□□ 0.61
SPIRE1-201ENST00000309836 NUTM2GQ5VZR2 741 aa18.86■□□□□ 0.61
SPIRE1-201ENST00000309836 APBB1O00213 710 aa18.85■□□□□ 0.61
SPIRE1-201ENST00000309836 L1TD1Q5T7N2 865 aaKnown RBP18.85■□□□□ 0.61
SPIRE1-201ENST00000309836 TNPO1Q92973 898 aaKnown RBP18.85■□□□□ 0.61
SPIRE1-201ENST00000309836 FSD2A1L4K1 749 aa18.84■□□□□ 0.61
SPIRE1-201ENST00000309836 DDX11L8A8MPP1 907 aa18.84■□□□□ 0.61
SPIRE1-201ENST00000309836 SDSP20132 328 aa18.84■□□□□ 0.61
SPIRE1-201ENST00000309836 RAB3GAP1Q15042 981 aa18.84■□□□□ 0.61
SPIRE1-201ENST00000309836 SLC4A10Q6U841 1118 aa18.84■□□□□ 0.61
SPIRE1-201ENST00000309836 USP26Q9BXU7 913 aa18.84■□□□□ 0.61
SPIRE1-201ENST00000309836 FOXD4L1Q9NU39 408 aa18.84■□□□□ 0.61
SPIRE1-201ENST00000309836 GZF1Q9H116 711 aaPredicted RBP18.83■□□□□ 0.6
SPIRE1-201ENST00000309836 GNAT3A8MTJ3 354 aa18.82■□□□□ 0.6
SPIRE1-201ENST00000309836 EIF5BO60841 1220 aaKnown RBP18.82■□□□□ 0.6
SPIRE1-201ENST00000309836 MAP3K5Q99683 1374 aa18.82■□□□□ 0.6
SPIRE1-201ENST00000309836 HMMRO75330 724 aa18.82■□□□□ 0.6
SPIRE1-201ENST00000309836 N4BP2Q86UW6 1770 aaPredicted RBP18.82■□□□□ 0.6
SPIRE1-201ENST00000309836 RABEP1Q15276 862 aa18.81■□□□□ 0.6
SPIRE1-201ENST00000309836 IL17REQ8NFR9 667 aa18.81■□□□□ 0.6
SPIRE1-201ENST00000309836 STK31Q9BXU1 1019 aa18.81■□□□□ 0.6
SPIRE1-201ENST00000309836 FLIIQ13045 1269 aa18.8■□□□□ 0.6
SPIRE1-201ENST00000309836 GNAI2P04899 355 aa18.8■□□□□ 0.6
SPIRE1-201ENST00000309836 GOLGA6L3A6NEY3 463 aa18.79■□□□□ 0.6
SPIRE1-201ENST00000309836 CCDC30Q5VVM6 783 aa18.79■□□□□ 0.6
SPIRE1-201ENST00000309836 LTV1Q96GA3 475 aaPredicted RBP18.79■□□□□ 0.6
SPIRE1-201ENST00000309836 TUBGCP6Q96RT7 1819 aa18.78■□□□□ 0.6
SPIRE1-201ENST00000309836 HSP90AA1P07900 732 aaKnown RBP18.78■□□□□ 0.6
SPIRE1-201ENST00000309836 XRCC6P12956 609 aaKnown RBP eCLIP18.78■□□□□ 0.6
SPIRE1-201ENST00000309836 ABTB2Q8N961 1025 aa18.78■□□□□ 0.6
SPIRE1-201ENST00000309836 NECTIN2Q92692 538 aa18.78■□□□□ 0.6
SPIRE1-201ENST00000309836 OSBPL3Q9H4L5 887 aa18.78■□□□□ 0.6
SPIRE1-201ENST00000309836 LTN1O94822 1766 aa18.78■□□□□ 0.6
SPIRE1-201ENST00000309836 PDE1AP54750 535 aa18.77■□□□□ 0.6
SPIRE1-201ENST00000309836 USHBP1Q8N6Y0 703 aa18.77■□□□□ 0.6
SPIRE1-201ENST00000309836 GBP4Q96PP9 640 aa18.77■□□□□ 0.6
SPIRE1-201ENST00000309836 NFAT5O94916 1531 aa18.77■□□□□ 0.59
SPIRE1-201ENST00000309836 SALL3Q9BXA9 1300 aa18.77■□□□□ 0.59
SPIRE1-201ENST00000309836 SSFA2P28290 1259 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms