RNA–Protein interactions for RNA: ENST00000309784.8

TRIM59-201, Transcript of tripartite motif containing 59, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM59, Length 3,867 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-201ENST00000309784 TATP17735 454 aaPredicted RBP14.27□□□□□ -0.13
TRIM59-201ENST00000309784 TWISTNBQ3B726 338 aaPredicted RBP14.27□□□□□ -0.13
TRIM59-201ENST00000309784 CFAP44Q96MT7 982 aa14.27□□□□□ -0.13
TRIM59-201ENST00000309784 A0A0G2JS52 829 aa14.26□□□□□ -0.13
TRIM59-201ENST00000309784 PEAK1Q9H792 1746 aa14.26□□□□□ -0.13
TRIM59-201ENST00000309784 MPRIPQ6WCQ1 1025 aa14.26□□□□□ -0.13
TRIM59-201ENST00000309784 NECTIN2Q92692 538 aa14.25□□□□□ -0.13
TRIM59-201ENST00000309784 ERBB3P21860 1342 aa14.25□□□□□ -0.13
TRIM59-201ENST00000309784 NCBP3Q53F19 620 aaKnown RBP14.25□□□□□ -0.13
TRIM59-201ENST00000309784 SSH1Q8WYL5 1049 aa14.25□□□□□ -0.13
TRIM59-201ENST00000309784 ZKSCAN2Q63HK3 967 aa14.24□□□□□ -0.13
TRIM59-201ENST00000309784 CCDC9Q9Y3X0 531 aaKnown RBP14.24□□□□□ -0.13
TRIM59-201ENST00000309784 SOS2Q07890 1332 aaPredicted RBP14.24□□□□□ -0.13
TRIM59-201ENST00000309784 RNF123Q5XPI4 1314 aa14.24□□□□□ -0.13
TRIM59-201ENST00000309784 KRT24Q2M2I5 525 aa14.24□□□□□ -0.13
TRIM59-201ENST00000309784 TSPYL6Q8N831 410 aa14.24□□□□□ -0.13
TRIM59-201ENST00000309784 IPO8O15397 1037 aaKnown RBP14.23□□□□□ -0.13
TRIM59-201ENST00000309784 AMOTQ4VCS5 1084 aa14.23□□□□□ -0.13
TRIM59-201ENST00000309784 ITPRIPQ8IWB1 547 aa14.23□□□□□ -0.13
TRIM59-201ENST00000309784 CT47B1P0C2W7 299 aaPredicted RBP14.22□□□□□ -0.13
TRIM59-201ENST00000309784 C8orf58Q8NAV2 365 aa14.22□□□□□ -0.13
TRIM59-201ENST00000309784 NOB1Q9ULX3 412 aaKnown RBP14.22□□□□□ -0.13
TRIM59-201ENST00000309784 MAP3K5Q99683 1374 aa14.21□□□□□ -0.13
TRIM59-201ENST00000309784 BCL11AQ9H165 835 aa14.21□□□□□ -0.13
TRIM59-201ENST00000309784 KDRP35968 1356 aa14.21□□□□□ -0.13
TRIM59-201ENST00000309784 SPG7Q9UQ90 795 aa14.21□□□□□ -0.14
TRIM59-201ENST00000309784 TNNQ9UQP3 1299 aa14.21□□□□□ -0.14
TRIM59-201ENST00000309784 MS4A1P11836 297 aa14.2□□□□□ -0.14
TRIM59-201ENST00000309784 LTN1O94822 1766 aa14.2□□□□□ -0.14
TRIM59-201ENST00000309784 DZIP1LQ8IYY4 767 aaKnown RBP14.2□□□□□ -0.14
TRIM59-201ENST00000309784 BTG4Q9NY30 223 aa14.2□□□□□ -0.14
TRIM59-201ENST00000309784 NFAT5O94916 1531 aa14.2□□□□□ -0.14
TRIM59-201ENST00000309784 EIF2S2P20042 333 aaKnown RBP14.2□□□□□ -0.14
TRIM59-201ENST00000309784 DDX54Q8TDD1 881 aaKnown RBP14.2□□□□□ -0.14
TRIM59-201ENST00000309784 LGR6Q9HBX8 967 aa14.2□□□□□ -0.14
TRIM59-201ENST00000309784 PXDNQ92626 1479 aa14.2□□□□□ -0.14
TRIM59-201ENST00000309784 STK31Q9BXU1 1019 aa14.19□□□□□ -0.14
TRIM59-201ENST00000309784 KIF16BQ96L93 1317 aa14.19□□□□□ -0.14
TRIM59-201ENST00000309784 MYT1Q01538 1121 aa14.19□□□□□ -0.14
TRIM59-201ENST00000309784 TAF7Q15545 349 aaPredicted RBP14.19□□□□□ -0.14
TRIM59-201ENST00000309784 IL17REQ8NFR9 667 aa14.19□□□□□ -0.14
TRIM59-201ENST00000309784 AKAP4Q5JQC9 854 aa14.18□□□□□ -0.14
TRIM59-201ENST00000309784 VAMP4O75379 141 aa14.18□□□□□ -0.14
TRIM59-201ENST00000309784 BTBD11A6QL63 1104 aa14.17□□□□□ -0.14
TRIM59-201ENST00000309784 PDE3AQ14432 1141 aa14.17□□□□□ -0.14
TRIM59-201ENST00000309784 CHL1O00533 1208 aa14.17□□□□□ -0.14
TRIM59-201ENST00000309784 HTATSF1O43719 755 aaKnown RBP14.17□□□□□ -0.14
TRIM59-201ENST00000309784 LARP1Q6PKG0 1096 aaKnown RBP14.17□□□□□ -0.14
TRIM59-201ENST00000309784 XIRP1Q702N8 1843 aaKnown RBP14.17□□□□□ -0.14
TRIM59-201ENST00000309784 ATF7IPQ6VMQ6 1270 aa14.16□□□□□ -0.14
TRIM59-201ENST00000309784 SLIT3O75094 1523 aa14.16□□□□□ -0.14
TRIM59-201ENST00000309784 ZNF853P0CG23 659 aa14.16□□□□□ -0.14
TRIM59-201ENST00000309784 SLC4A10Q6U841 1118 aa14.16□□□□□ -0.14
TRIM59-201ENST00000309784 MED1Q15648 1581 aaPredicted RBP14.16□□□□□ -0.14
TRIM59-201ENST00000309784 SLC4A2P04920 1241 aa14.16□□□□□ -0.14
TRIM59-201ENST00000309784 TRIM27P14373 513 aa14.15□□□□□ -0.14
TRIM59-201ENST00000309784 ALDH1L2Q3SY69 923 aa14.15□□□□□ -0.14
TRIM59-201ENST00000309784 IFNL2Q8IZJ0 200 aa14.15□□□□□ -0.14
TRIM59-201ENST00000309784 TRPM3Q9HCF6 1732 aaPredicted RBP14.15□□□□□ -0.14
TRIM59-201ENST00000309784 KAT6BQ8WYB5 2073 aa14.15□□□□□ -0.14
TRIM59-201ENST00000309784 RLBP1P12271 317 aa14.15□□□□□ -0.15
TRIM59-201ENST00000309784 ZNF428Q96B54 188 aa14.15□□□□□ -0.15
TRIM59-201ENST00000309784 WDR17Q8IZU2 1322 aa14.14□□□□□ -0.15
TRIM59-201ENST00000309784 RNMTO43148 476 aaKnown RBP14.14□□□□□ -0.15
TRIM59-201ENST00000309784 HDGFL1Q5TGJ6 251 aa14.13□□□□□ -0.15
TRIM59-201ENST00000309784 TTC5Q8N0Z6 440 aa14.13□□□□□ -0.15
TRIM59-201ENST00000309784 IL2RBP14784 551 aa14.13□□□□□ -0.15
TRIM59-201ENST00000309784 ZCRB1Q8TBF4 217 aaKnown RBP14.13□□□□□ -0.15
TRIM59-201ENST00000309784 CABP4P57796 275 aa14.12□□□□□ -0.15
TRIM59-201ENST00000309784 TMEM57Q8N5G2 664 aa14.12□□□□□ -0.15
TRIM59-201ENST00000309784 SLC39A6Q13433 755 aa14.12□□□□□ -0.15
TRIM59-201ENST00000309784 FKBP5Q13451 457 aaPredicted RBP14.12□□□□□ -0.15
TRIM59-201ENST00000309784 CCDC30Q5VVM6 783 aa14.12□□□□□ -0.15
TRIM59-201ENST00000309784 SYTL4Q96C24 671 aaPredicted RBP14.12□□□□□ -0.15
TRIM59-201ENST00000309784 API5Q9BZZ5 524 aaKnown RBP14.12□□□□□ -0.15
TRIM59-201ENST00000309784 MARF1Q9Y4F3 1742 aaKnown RBP14.12□□□□□ -0.15
TRIM59-201ENST00000309784 MVPQ14764 893 aaKnown RBP14.11□□□□□ -0.15
TRIM59-201ENST00000309784 DDX19BQ9UMR2 479 aa14.11□□□□□ -0.15
TRIM59-201ENST00000309784 CPDO75976 1380 aa14.11□□□□□ -0.15
TRIM59-201ENST00000309784 ALS2Q96Q42 1657 aa14.11□□□□□ -0.15
TRIM59-201ENST00000309784 MEX3CQ5U5Q3 659 aaKnown RBP14.11□□□□□ -0.15
TRIM59-201ENST00000309784 MRPL50Q8N5N7 158 aaKnown RBP14.11□□□□□ -0.15
TRIM59-201ENST00000309784 NGLY1Q96IV0 654 aa14.11□□□□□ -0.15
TRIM59-201ENST00000309784 DLG5Q8TDM6 1919 aa14.11□□□□□ -0.15
TRIM59-201ENST00000309784 NFATC2IPQ8NCF5 419 aa14.11□□□□□ -0.15
TRIM59-201ENST00000309784 C8orf37Q96NL8 207 aa14.11□□□□□ -0.15
TRIM59-201ENST00000309784 RGS3P49796 1198 aa14.1□□□□□ -0.15
TRIM59-201ENST00000309784 KCNQ3O43525 872 aa14.1□□□□□ -0.15
TRIM59-201ENST00000309784 HSP90AB1P08238 724 aaKnown RBP14.1□□□□□ -0.15
TRIM59-201ENST00000309784 PHKG2P15735 406 aa14.1□□□□□ -0.15
TRIM59-201ENST00000309784 CRB1P82279 1406 aa14.09□□□□□ -0.15
TRIM59-201ENST00000309784 ROBO1Q9Y6N7 1651 aa14.09□□□□□ -0.15
TRIM59-201ENST00000309784 CARD10Q9BWT7 1032 aa14.08□□□□□ -0.16
TRIM59-201ENST00000309784 ARXQ96QS3 562 aa14.08□□□□□ -0.16
TRIM59-201ENST00000309784 RGPD2P0DJD1 1756 aa14.08□□□□□ -0.16
TRIM59-201ENST00000309784 RGPD5Q99666 1765 aa14.07□□□□□ -0.16
TRIM59-201ENST00000309784 RGPD1P0DJD0 1748 aa14.07□□□□□ -0.16
TRIM59-201ENST00000309784 ANXA1P04083 346 aa14.07□□□□□ -0.16
TRIM59-201ENST00000309784 CERKQ8TCT0 537 aa14.07□□□□□ -0.16
TRIM59-201ENST00000309784 CYP27B1O15528 508 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms