RNA–Protein interactions for RNA: ENST00000309469.8

ATG4D-201, Transcript of autophagy related 4D cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4D, Length 1,949 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-201ENST00000309469 CRB1P82279 1406 aa27.21■■□□□ 1.95
ATG4D-201ENST00000309469 ELL2O00472 640 aaPredicted RBP27.21■■□□□ 1.95
ATG4D-201ENST00000309469 HTATSF1O43719 755 aaKnown RBP27.2■■□□□ 1.95
ATG4D-201ENST00000309469 PLEKHG5O94827 1062 aa27.2■■□□□ 1.94
ATG4D-201ENST00000309469 MRPL50Q8N5N7 158 aaKnown RBP27.2■■□□□ 1.94
ATG4D-201ENST00000309469 NBPF6Q5VWK0 638 aa27.19■■□□□ 1.94
ATG4D-201ENST00000309469 NBPF4Q96M43 638 aa27.19■■□□□ 1.94
ATG4D-201ENST00000309469 USHBP1Q8N6Y0 703 aa27.18■■□□□ 1.94
ATG4D-201ENST00000309469 IGHDP01880 384 aa27.18■■□□□ 1.94
ATG4D-201ENST00000309469 DDX17Q92841 729 aaKnown RBP27.18■■□□□ 1.94
ATG4D-201ENST00000309469 NPHP3Q7Z494 1330 aa27.17■■□□□ 1.94
ATG4D-201ENST00000309469 ALS2Q96Q42 1657 aa27.16■■□□□ 1.94
ATG4D-201ENST00000309469 GNAT3A8MTJ3 354 aa27.16■■□□□ 1.94
ATG4D-201ENST00000309469 ARHGAP45Q92619 1136 aa27.14■■□□□ 1.94
ATG4D-201ENST00000309469 KIAA0232Q92628 1395 aa27.14■■□□□ 1.94
ATG4D-201ENST00000309469 PCDHB15Q9Y5E8 787 aa27.14■■□□□ 1.93
ATG4D-201ENST00000309469 HAP1P54257 671 aaPredicted RBP27.13■■□□□ 1.93
ATG4D-201ENST00000309469 SKAP1Q86WV1 359 aa27.13■■□□□ 1.93
ATG4D-201ENST00000309469 DDX19BQ9UMR2 479 aa27.13■■□□□ 1.93
ATG4D-201ENST00000309469 ZNF335Q9H4Z2 1342 aaPredicted RBP27.13■■□□□ 1.93
ATG4D-201ENST00000309469 XIRP1Q702N8 1843 aaKnown RBP27.13■■□□□ 1.93
ATG4D-201ENST00000309469 ITPRIPQ8IWB1 547 aa27.12■■□□□ 1.93
ATG4D-201ENST00000309469 TMEM57Q8N5G2 664 aa27.12■■□□□ 1.93
ATG4D-201ENST00000309469 LRRC59Q96AG4 307 aaKnown RBP27.12■■□□□ 1.93
ATG4D-201ENST00000309469 MAP3K5Q99683 1374 aa27.12■■□□□ 1.93
ATG4D-201ENST00000309469 MED1Q15648 1581 aaPredicted RBP27.11■■□□□ 1.93
ATG4D-201ENST00000309469 ANKRD24Q8TF21 1146 aa27.1■■□□□ 1.93
ATG4D-201ENST00000309469 KRT24Q2M2I5 525 aa27.1■■□□□ 1.93
ATG4D-201ENST00000309469 MIS18AQ9NYP9 233 aa27.1■■□□□ 1.93
ATG4D-201ENST00000309469 TSPYL4Q9UJ04 414 aa27.1■■□□□ 1.93
ATG4D-201ENST00000309469 AXIN2Q9Y2T1 843 aa27.09■■□□□ 1.93
ATG4D-201ENST00000309469 TNS3Q68CZ2 1445 aa27.08■■□□□ 1.93
ATG4D-201ENST00000309469 ZC3H6P61129 1189 aaKnown RBP27.08■■□□□ 1.93
ATG4D-201ENST00000309469 IL17REQ8NFR9 667 aa27.08■■□□□ 1.93
ATG4D-201ENST00000309469 PXDNQ92626 1479 aa27.07■■□□□ 1.92
ATG4D-201ENST00000309469 BRINP3Q76B58 766 aa27.07■■□□□ 1.92
ATG4D-201ENST00000309469 SPATA31A3Q5VYP0 1347 aa27.06■■□□□ 1.92
ATG4D-201ENST00000309469 NCAPD2Q15021 1401 aa27.06■■□□□ 1.92
ATG4D-201ENST00000309469 RWDD1Q9H446 243 aaPredicted RBP27.06■■□□□ 1.92
ATG4D-201ENST00000309469 LRRC37A3O60309 1634 aa27.05■■□□□ 1.92
ATG4D-201ENST00000309469 API5Q9BZZ5 524 aaKnown RBP27.04■■□□□ 1.92
ATG4D-201ENST00000309469 ZBTB40Q9NUA8 1239 aa27.03■■□□□ 1.92
ATG4D-201ENST00000309469 SLAIN2Q9P270 581 aa27.03■■□□□ 1.92
ATG4D-201ENST00000309469 RGPD2P0DJD1 1756 aa27.02■■□□□ 1.92
ATG4D-201ENST00000309469 PDE4AP27815 886 aa27.02■■□□□ 1.92
ATG4D-201ENST00000309469 PLEKHO1Q53GL0 409 aaPredicted RBP27.02■■□□□ 1.92
ATG4D-201ENST00000309469 BABAM1Q9NWV8 329 aa27.02■■□□□ 1.92
ATG4D-201ENST00000309469 ABCC4O15439 1325 aa27.02■■□□□ 1.92
ATG4D-201ENST00000309469 TAF7Q15545 349 aaPredicted RBP27.02■■□□□ 1.92
ATG4D-201ENST00000309469 AMOTQ4VCS5 1084 aa27.01■■□□□ 1.91
ATG4D-201ENST00000309469 CABLES1Q8TDN4 633 aa27.01■■□□□ 1.91
ATG4D-201ENST00000309469 ERBB3P21860 1342 aa27■■□□□ 1.91
ATG4D-201ENST00000309469 BACH2Q9BYV9 841 aa26.99■■□□□ 1.91
ATG4D-201ENST00000309469 CHMP4BQ9H444 224 aaKnown RBP26.98■■□□□ 1.91
ATG4D-201ENST00000309469 CEMIPQ8WUJ3 1361 aa26.98■■□□□ 1.91
ATG4D-201ENST00000309469 CAMTA1Q9Y6Y1 1673 aa26.98■■□□□ 1.91
ATG4D-201ENST00000309469 RGS3P49796 1198 aa26.98■■□□□ 1.91
ATG4D-201ENST00000309469 AKAP4Q5JQC9 854 aa26.98■■□□□ 1.91
ATG4D-201ENST00000309469 ZBTB7BO15156 539 aaPredicted RBP26.97■■□□□ 1.91
ATG4D-201ENST00000309469 ZNF530Q6P9A1 599 aaPredicted RBP26.97■■□□□ 1.91
ATG4D-201ENST00000309469 HDAC1Q13547 482 aaPredicted RBP26.96■■□□□ 1.91
ATG4D-201ENST00000309469 SOS2Q07890 1332 aaPredicted RBP26.95■■□□□ 1.9
ATG4D-201ENST00000309469 LGR6Q9HBX8 967 aa26.94■■□□□ 1.9
ATG4D-201ENST00000309469 SLC4A2P04920 1241 aa26.94■■□□□ 1.9
ATG4D-201ENST00000309469 PTPRCP08575 1304 aa26.93■■□□□ 1.9
ATG4D-201ENST00000309469 SOS1Q07889 1333 aaPredicted RBP26.93■■□□□ 1.9
ATG4D-201ENST00000309469 CPDO75976 1380 aa26.93■■□□□ 1.9
ATG4D-201ENST00000309469 RGPD5Q99666 1765 aa26.92■■□□□ 1.9
ATG4D-201ENST00000309469 LMO7Q8WWI1 1683 aa26.92■■□□□ 1.9
ATG4D-201ENST00000309469 C1orf141Q5JVX7 400 aa26.92■■□□□ 1.9
ATG4D-201ENST00000309469 COL18A1P39060 1754 aa26.91■■□□□ 1.9
ATG4D-201ENST00000309469 NLRP2Q9NX02 1062 aa26.91■■□□□ 1.9
ATG4D-201ENST00000309469 CRYBG1Q9Y4K1 1723 aa26.91■■□□□ 1.9
ATG4D-201ENST00000309469 ABCC6O95255 1503 aa26.91■■□□□ 1.9
ATG4D-201ENST00000309469 CHRNA2Q15822 529 aa26.9■■□□□ 1.9
ATG4D-201ENST00000309469 PDZRN3Q9UPQ7 1066 aa26.9■■□□□ 1.9
ATG4D-201ENST00000309469 INTS3Q68E01 1043 aaKnown RBP26.9■■□□□ 1.9
ATG4D-201ENST00000309469 RGS12O14924 1447 aa26.89■■□□□ 1.9
ATG4D-201ENST00000309469 MPRIPQ6WCQ1 1025 aa26.89■■□□□ 1.9
ATG4D-201ENST00000309469 CCDC30Q5VVM6 783 aa26.88■■□□□ 1.89
ATG4D-201ENST00000309469 RNMTO43148 476 aaKnown RBP26.87■■□□□ 1.89
ATG4D-201ENST00000309469 CSB-PGBD3P0DP91 1061 aa26.87■■□□□ 1.89
ATG4D-201ENST00000309469 TEFQ10587 303 aa26.87■■□□□ 1.89
ATG4D-201ENST00000309469 RAPGEF4Q8WZA2 1011 aa26.87■■□□□ 1.89
ATG4D-201ENST00000309469 STK31Q9BXU1 1019 aa26.87■■□□□ 1.89
ATG4D-201ENST00000309469 FAM161AQ3B820 660 aa26.86■■□□□ 1.89
ATG4D-201ENST00000309469 OVOS2A0A0G2JMS6 1433 aa26.85■■□□□ 1.89
ATG4D-201ENST00000309469 G2E3Q7L622 706 aa26.85■■□□□ 1.89
ATG4D-201ENST00000309469 SMC5Q8IY18 1101 aa26.84■■□□□ 1.89
ATG4D-201ENST00000309469 TATP17735 454 aaPredicted RBP26.83■■□□□ 1.89
ATG4D-201ENST00000309469 EIF4A1P60842 406 aaKnown RBP26.83■■□□□ 1.89
ATG4D-201ENST00000309469 BTBD11A6QL63 1104 aa26.82■■□□□ 1.88
ATG4D-201ENST00000309469 C8orf34Q49A92 452 aa26.82■■□□□ 1.88
ATG4D-201ENST00000309469 C1orf115Q9H7X2 142 aa26.82■■□□□ 1.88
ATG4D-201ENST00000309469 FAM208AQ9UK61 1670 aaKnown RBP26.82■■□□□ 1.88
ATG4D-201ENST00000309469 MSH5O43196 834 aa26.81■■□□□ 1.88
ATG4D-201ENST00000309469 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.8■■□□□ 1.88
ATG4D-201ENST00000309469 NECTIN2Q92692 538 aa26.8■■□□□ 1.88
ATG4D-201ENST00000309469 PRDM11Q9NQV5 511 aa26.8■■□□□ 1.88
ATG4D-201ENST00000309469 SPG7Q9UQ90 795 aa26.8■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms