RNA–Protein interactions for RNA: ENST00000309263.7

SCUBE2-201, Transcript of signal peptide, CUB domain and EGF like domain containing 2, humanhuman

TSL 5 BASIC

Gene SCUBE2, Length 3,727 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE2-201ENST00000309263 NECTIN2Q92692 538 aa17.6■□□□□ 0.41
SCUBE2-201ENST00000309263 ZC3H13Q5T200 1668 aaKnown RBP17.6■□□□□ 0.41
SCUBE2-201ENST00000309263 TMEM63CQ9P1W3 806 aa17.6■□□□□ 0.41
SCUBE2-201ENST00000309263 ZNF830Q96NB3 372 aaPredicted RBP17.59■□□□□ 0.41
SCUBE2-201ENST00000309263 POLKQ9UBT6 870 aa17.59■□□□□ 0.41
SCUBE2-201ENST00000309263 CLTCQ00610 1675 aaKnown RBP17.59■□□□□ 0.41
SCUBE2-201ENST00000309263 ANO2Q9NQ90 1003 aa17.59■□□□□ 0.41
SCUBE2-201ENST00000309263 UPF3BQ9BZI7 483 aaKnown RBP17.59■□□□□ 0.41
SCUBE2-201ENST00000309263 EXOC6BQ9Y2D4 811 aa17.58■□□□□ 0.4
SCUBE2-201ENST00000309263 MYOM2P54296 1465 aa17.57■□□□□ 0.4
SCUBE2-201ENST00000309263 NSD2O96028 1365 aa17.57■□□□□ 0.4
SCUBE2-201ENST00000309263 REC8O95072 547 aa17.57■□□□□ 0.4
SCUBE2-201ENST00000309263 NME9Q86XW9 330 aa17.57■□□□□ 0.4
SCUBE2-201ENST00000309263 MEIS3Q99687 375 aa17.57■□□□□ 0.4
SCUBE2-201ENST00000309263 LARP6Q9BRS8 491 aaKnown RBP17.57■□□□□ 0.4
SCUBE2-201ENST00000309263 MCM10Q7L590 875 aa17.57■□□□□ 0.4
SCUBE2-201ENST00000309263 TSC1Q92574 1164 aa17.57■□□□□ 0.4
SCUBE2-201ENST00000309263 F6X3S4 739 aa17.57■□□□□ 0.4
SCUBE2-201ENST00000309263 FAM177BA6PVY3 158 aa17.56■□□□□ 0.4
SCUBE2-201ENST00000309263 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.56■□□□□ 0.4
SCUBE2-201ENST00000309263 JARID2Q92833 1246 aaPredicted RBP17.56■□□□□ 0.4
SCUBE2-201ENST00000309263 ZNF445P59923 1031 aa17.55■□□□□ 0.4
SCUBE2-201ENST00000309263 DCTPP1Q9H773 170 aa17.55■□□□□ 0.4
SCUBE2-201ENST00000309263 NCKAP5LQ9HCH0 1330 aa17.54■□□□□ 0.4
SCUBE2-201ENST00000309263 NOL7Q9UMY1 257 aaKnown RBP17.54■□□□□ 0.4
SCUBE2-201ENST00000309263 ERC2O15083 957 aa17.54■□□□□ 0.4
SCUBE2-201ENST00000309263 IFT57Q9NWB7 429 aa17.54■□□□□ 0.4
SCUBE2-201ENST00000309263 SLC4A2P04920 1241 aa17.53■□□□□ 0.4
SCUBE2-201ENST00000309263 ZKSCAN5Q9Y2L8 839 aa17.53■□□□□ 0.4
SCUBE2-201ENST00000309263 C17orf53Q8N3J3 647 aaPredicted RBP17.53■□□□□ 0.4
SCUBE2-201ENST00000309263 TMX3Q96JJ7 454 aa17.53■□□□□ 0.4
SCUBE2-201ENST00000309263 CWC22Q9HCG8 908 aaKnown RBP17.53■□□□□ 0.4
SCUBE2-201ENST00000309263 KIF1BO60333 1816 aa17.53■□□□□ 0.4
SCUBE2-201ENST00000309263 AEBP1Q8IUX7 1158 aa17.52■□□□□ 0.4
SCUBE2-201ENST00000309263 BCL11BQ9C0K0 894 aaPredicted RBP17.52■□□□□ 0.4
SCUBE2-201ENST00000309263 ZDHHC9Q9Y397 364 aa17.52■□□□□ 0.4
SCUBE2-201ENST00000309263 MAP4K4O95819 1239 aaPredicted RBP17.52■□□□□ 0.39
SCUBE2-201ENST00000309263 LRSAM1Q6UWE0 723 aa17.52■□□□□ 0.39
SCUBE2-201ENST00000309263 ARHGAP45Q92619 1136 aa17.52■□□□□ 0.39
SCUBE2-201ENST00000309263 SULT6B1Q6IMI4 303 aa17.51■□□□□ 0.39
SCUBE2-201ENST00000309263 CFAP44Q96MT7 982 aa17.51■□□□□ 0.39
SCUBE2-201ENST00000309263 TAOK2Q9UL54 1235 aa17.51■□□□□ 0.39
SCUBE2-201ENST00000309263 CCDC39Q9UFE4 941 aa17.51■□□□□ 0.39
SCUBE2-201ENST00000309263 QRICH2Q9H0J4 1663 aa17.51■□□□□ 0.39
SCUBE2-201ENST00000309263 TNRQ92752 1358 aa17.51■□□□□ 0.39
SCUBE2-201ENST00000309263 RPGRIP1LQ68CZ1 1315 aa17.51■□□□□ 0.39
SCUBE2-201ENST00000309263 CHMP3Q9Y3E7 222 aa17.5■□□□□ 0.39
SCUBE2-201ENST00000309263 ABCC4O15439 1325 aa17.5■□□□□ 0.39
SCUBE2-201ENST00000309263 CEP85Q6P2H3 762 aa17.5■□□□□ 0.39
SCUBE2-201ENST00000309263 USP25Q9UHP3 1055 aa17.5■□□□□ 0.39
SCUBE2-201ENST00000309263 TSPY26PQ9H489 355 aa17.5■□□□□ 0.39
SCUBE2-201ENST00000309263 PREX1Q8TCU6 1659 aa17.49■□□□□ 0.39
SCUBE2-201ENST00000309263 LMOD3Q0VAK6 560 aa17.49■□□□□ 0.39
SCUBE2-201ENST00000309263 KIAA2012Q0VF49 1180 aa17.49■□□□□ 0.39
SCUBE2-201ENST00000309263 ANKRD44Q8N8A2 993 aa17.49■□□□□ 0.39
SCUBE2-201ENST00000309263 COG3Q96JB2 828 aa17.49■□□□□ 0.39
SCUBE2-201ENST00000309263 MCCP23508 829 aa17.48■□□□□ 0.39
SCUBE2-201ENST00000309263 GADD45BO75293 160 aaPredicted RBP17.48■□□□□ 0.39
SCUBE2-201ENST00000309263 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.48■□□□□ 0.39
SCUBE2-201ENST00000309263 ZHX1Q9UKY1 873 aaPredicted RBP17.48■□□□□ 0.39
SCUBE2-201ENST00000309263 HMMRO75330 724 aa17.48■□□□□ 0.39
SCUBE2-201ENST00000309263 NCBP3Q53F19 620 aaKnown RBP17.48■□□□□ 0.39
SCUBE2-201ENST00000309263 TTC12Q9H892 705 aaPredicted RBP17.48■□□□□ 0.39
SCUBE2-201ENST00000309263 TULP4Q9NRJ4 1543 aa17.48■□□□□ 0.39
SCUBE2-201ENST00000309263 MROH2AA6NES4 1674 aa17.47■□□□□ 0.39
SCUBE2-201ENST00000309263 CSPP1Q1MSJ5 1256 aa17.47■□□□□ 0.39
SCUBE2-201ENST00000309263 NUTM2GQ5VZR2 741 aa17.47■□□□□ 0.39
SCUBE2-201ENST00000309263 PALD1Q9ULE6 856 aa17.47■□□□□ 0.39
SCUBE2-201ENST00000309263 LTV1Q96GA3 475 aaPredicted RBP17.47■□□□□ 0.39
SCUBE2-201ENST00000309263 IL1RAPL2Q9NP60 686 aa17.47■□□□□ 0.39
SCUBE2-201ENST00000309263 RPAP2Q8IXW5 612 aaPredicted RBP17.46■□□□□ 0.39
SCUBE2-201ENST00000309263 MBD3O95983 291 aa17.46■□□□□ 0.39
SCUBE2-201ENST00000309263 SYAP1Q96A49 352 aaPredicted RBP17.46■□□□□ 0.39
SCUBE2-201ENST00000309263 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.46■□□□□ 0.39
SCUBE2-201ENST00000309263 MSH6P52701 1360 aa17.46■□□□□ 0.39
SCUBE2-201ENST00000309263 FIBPO43427 364 aa17.45■□□□□ 0.38
SCUBE2-201ENST00000309263 CYP2E1P05181 493 aaPredicted RBP17.45■□□□□ 0.38
SCUBE2-201ENST00000309263 FER1L4A9Z1Z3 1794 aa17.45■□□□□ 0.38
SCUBE2-201ENST00000309263 PDE1AP54750 535 aa17.45■□□□□ 0.38
SCUBE2-201ENST00000309263 G2E3Q7L622 706 aa17.44■□□□□ 0.38
SCUBE2-201ENST00000309263 SPC24Q8NBT2 197 aa17.44■□□□□ 0.38
SCUBE2-201ENST00000309263 KIAA1210Q9ULL0 1709 aa17.44■□□□□ 0.38
SCUBE2-201ENST00000309263 SPATA31D1Q6ZQQ2 1576 aa17.44■□□□□ 0.38
SCUBE2-201ENST00000309263 HCLS1P14317 486 aaPredicted RBP17.44■□□□□ 0.38
SCUBE2-201ENST00000309263 DDX54Q8TDD1 881 aaKnown RBP17.44■□□□□ 0.38
SCUBE2-201ENST00000309263 ZNF500O60304 480 aaPredicted RBP17.43■□□□□ 0.38
SCUBE2-201ENST00000309263 IL13P35225 146 aa17.43■□□□□ 0.38
SCUBE2-201ENST00000309263 FKBP5Q13451 457 aaPredicted RBP17.43■□□□□ 0.38
SCUBE2-201ENST00000309263 CLEC17AQ6ZS10 378 aa17.43■□□□□ 0.38
SCUBE2-201ENST00000309263 TXNDC2Q86VQ3 553 aa17.43■□□□□ 0.38
SCUBE2-201ENST00000309263 LMOD2Q6P5Q4 547 aa17.43■□□□□ 0.38
SCUBE2-201ENST00000309263 SASS6Q6UVJ0 657 aa17.43■□□□□ 0.38
SCUBE2-201ENST00000309263 ADGRB3O60242 1522 aa17.43■□□□□ 0.38
SCUBE2-201ENST00000309263 PDLIM2Q96JY6 352 aa17.43■□□□□ 0.38
SCUBE2-201ENST00000309263 IBTKQ9P2D0 1353 aaPredicted RBP17.42■□□□□ 0.38
SCUBE2-201ENST00000309263 USP48Q86UV5 1035 aa17.42■□□□□ 0.38
SCUBE2-201ENST00000309263 CBX1P83916 185 aa17.42■□□□□ 0.38
SCUBE2-201ENST00000309263 RTF1Q92541 710 aaKnown RBP17.42■□□□□ 0.38
SCUBE2-201ENST00000309263 RBM33Q96EV2 1170 aaKnown RBP17.42■□□□□ 0.38
SCUBE2-201ENST00000309263 TSPYL4Q9UJ04 414 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms