RNA–Protein interactions for RNA: ENST00000309052.8

LCLAT1-201, Transcript of lysocardiolipin acyltransferase 1, humanhuman

TSL 1 (best) BASIC

Gene LCLAT1, Length 5,060 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCLAT1-201ENST00000309052 REREQ9P2R6 1566 aa10.84□□□□□ -0.67
LCLAT1-201ENST00000309052 PRAMEF22A3QJZ6 481 aa10.84□□□□□ -0.67
LCLAT1-201ENST00000309052 TTC5Q8N0Z6 440 aa10.84□□□□□ -0.67
LCLAT1-201ENST00000309052 IFT57Q9NWB7 429 aa10.84□□□□□ -0.67
LCLAT1-201ENST00000309052 PDE3AQ14432 1141 aa10.83□□□□□ -0.68
LCLAT1-201ENST00000309052 CENPQQ7L2Z9 268 aaPredicted RBP10.83□□□□□ -0.68
LCLAT1-201ENST00000309052 RBM42Q9BTD8 480 aaKnown RBP10.83□□□□□ -0.68
LCLAT1-201ENST00000309052 DDX19BQ9UMR2 479 aa10.83□□□□□ -0.68
LCLAT1-201ENST00000309052 CHMP3Q9Y3E7 222 aa10.83□□□□□ -0.68
LCLAT1-201ENST00000309052 KIF16BQ96L93 1317 aa10.83□□□□□ -0.68
LCLAT1-201ENST00000309052 FAM177BA6PVY3 158 aa10.83□□□□□ -0.68
LCLAT1-201ENST00000309052 OS9Q13438 667 aaPredicted RBP10.83□□□□□ -0.68
LCLAT1-201ENST00000309052 PDZRN3Q9UPQ7 1066 aa10.83□□□□□ -0.68
LCLAT1-201ENST00000309052 SBNO1A3KN83 1393 aa10.83□□□□□ -0.68
LCLAT1-201ENST00000309052 TAF7Q15545 349 aaPredicted RBP10.83□□□□□ -0.68
LCLAT1-201ENST00000309052 PHAXQ9H814 394 aaKnown RBP10.83□□□□□ -0.68
LCLAT1-201ENST00000309052 BTG4Q9NY30 223 aa10.83□□□□□ -0.68
LCLAT1-201ENST00000309052 KIAA0232Q92628 1395 aa10.82□□□□□ -0.68
LCLAT1-201ENST00000309052 ARHGEF25Q86VW2 580 aa10.82□□□□□ -0.68
LCLAT1-201ENST00000309052 MS4A1P11836 297 aa10.82□□□□□ -0.68
LCLAT1-201ENST00000309052 LMTK3Q96Q04 1460 aa10.82□□□□□ -0.68
LCLAT1-201ENST00000309052 CCDC27Q2M243 656 aa10.82□□□□□ -0.68
LCLAT1-201ENST00000309052 MAP2P11137 1827 aaKnown RBP10.81□□□□□ -0.68
LCLAT1-201ENST00000309052 TRMT2AQ8IZ69 625 aaKnown RBP10.81□□□□□ -0.68
LCLAT1-201ENST00000309052 MFAP1P55081 439 aaKnown RBP10.81□□□□□ -0.68
LCLAT1-201ENST00000309052 FAM182BQ5T319 152 aa10.81□□□□□ -0.68
LCLAT1-201ENST00000309052 CABP4P57796 275 aa10.81□□□□□ -0.68
LCLAT1-201ENST00000309052 LARP1Q6PKG0 1096 aaKnown RBP10.81□□□□□ -0.68
LCLAT1-201ENST00000309052 CCDC85AQ96PX6 553 aaPredicted RBP10.81□□□□□ -0.68
LCLAT1-201ENST00000309052 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.81□□□□□ -0.68
LCLAT1-201ENST00000309052 SMARCA5O60264 1052 aaPredicted RBP10.8□□□□□ -0.68
LCLAT1-201ENST00000309052 MEIS3Q99687 375 aa10.8□□□□□ -0.68
LCLAT1-201ENST00000309052 RNF123Q5XPI4 1314 aa10.8□□□□□ -0.68
LCLAT1-201ENST00000309052 TECPR2O15040 1411 aa10.8□□□□□ -0.68
LCLAT1-201ENST00000309052 ADGRL3Q9HAR2 1447 aa10.8□□□□□ -0.68
LCLAT1-201ENST00000309052 ACSBG1Q96GR2 724 aa10.8□□□□□ -0.68
LCLAT1-201ENST00000309052 CHPF2Q9P2E5 772 aa10.8□□□□□ -0.68
LCLAT1-201ENST00000309052 INSRP06213 1382 aa10.79□□□□□ -0.68
LCLAT1-201ENST00000309052 API5Q9BZZ5 524 aaKnown RBP10.79□□□□□ -0.68
LCLAT1-201ENST00000309052 EXOC6BQ9Y2D4 811 aa10.79□□□□□ -0.68
LCLAT1-201ENST00000309052 NRXN3Q9Y4C0 1643 aa10.79□□□□□ -0.68
LCLAT1-201ENST00000309052 DIP2AQ14689 1571 aa10.79□□□□□ -0.68
LCLAT1-201ENST00000309052 TSHZ3Q63HK5 1081 aa10.79□□□□□ -0.68
LCLAT1-201ENST00000309052 C8orf37Q96NL8 207 aa10.79□□□□□ -0.68
LCLAT1-201ENST00000309052 C9orf78Q9NZ63 289 aaPredicted RBP10.79□□□□□ -0.68
LCLAT1-201ENST00000309052 NEURL4Q96JN8 1562 aa10.79□□□□□ -0.68
LCLAT1-201ENST00000309052 ARHGAP23Q9P227 1491 aa10.78□□□□□ -0.68
LCLAT1-201ENST00000309052 CCDC30Q5VVM6 783 aa10.78□□□□□ -0.68
LCLAT1-201ENST00000309052 MRPL50Q8N5N7 158 aaKnown RBP10.78□□□□□ -0.68
LCLAT1-201ENST00000309052 PI4KAP2A4QPH2 592 aa10.78□□□□□ -0.68
LCLAT1-201ENST00000309052 PI4KAP1Q8N8J0 262 aa10.78□□□□□ -0.68
LCLAT1-201ENST00000309052 NGLY1Q96IV0 654 aa10.78□□□□□ -0.68
LCLAT1-201ENST00000309052 RGPD8O14715 1765 aaPredicted RBP10.78□□□□□ -0.68
LCLAT1-201ENST00000309052 FLIIQ13045 1269 aa10.78□□□□□ -0.68
LCLAT1-201ENST00000309052 RIC3Q7Z5B4 369 aa10.78□□□□□ -0.68
LCLAT1-201ENST00000309052 CHL1O00533 1208 aa10.77□□□□□ -0.68
LCLAT1-201ENST00000309052 AATKQ6ZMQ8 1374 aa10.77□□□□□ -0.69
LCLAT1-201ENST00000309052 PNPLA6Q8IY17 1366 aa10.77□□□□□ -0.69
LCLAT1-201ENST00000309052 PIK3R4Q99570 1358 aa10.77□□□□□ -0.69
LCLAT1-201ENST00000309052 DLC1Q96QB1 1528 aa10.77□□□□□ -0.69
LCLAT1-201ENST00000309052 IL1RAPL2Q9NP60 686 aa10.77□□□□□ -0.69
LCLAT1-201ENST00000309052 SPG7Q9UQ90 795 aa10.77□□□□□ -0.69
LCLAT1-201ENST00000309052 IGSF1Q8N6C5 1336 aa10.77□□□□□ -0.69
LCLAT1-201ENST00000309052 ATP5J2-PTCD1G3V325 749 aa10.77□□□□□ -0.69
LCLAT1-201ENST00000309052 UPF2Q9HAU5 1272 aaKnown RBP10.77□□□□□ -0.69
LCLAT1-201ENST00000309052 C1orf167Q5SNV9 1468 aa10.76□□□□□ -0.69
LCLAT1-201ENST00000309052 LRRC7Q96NW7 1537 aa10.76□□□□□ -0.69
LCLAT1-201ENST00000309052 SRCAPQ6ZRS2 3230 aa10.76□□□□□ -0.69
LCLAT1-201ENST00000309052 SLIT1O75093 1534 aa10.76□□□□□ -0.69
LCLAT1-201ENST00000309052 PTCH1Q13635 1447 aa10.76□□□□□ -0.69
LCLAT1-201ENST00000309052 SIL1Q9H173 461 aa10.76□□□□□ -0.69
LCLAT1-201ENST00000309052 MEX3CQ5U5Q3 659 aaKnown RBP10.76□□□□□ -0.69
LCLAT1-201ENST00000309052 PHF23Q9BUL5 403 aaPredicted RBP10.76□□□□□ -0.69
LCLAT1-201ENST00000309052 ERBB3P21860 1342 aa10.76□□□□□ -0.69
LCLAT1-201ENST00000309052 KCNQ4P56696 695 aa10.76□□□□□ -0.69
LCLAT1-201ENST00000309052 C16orf71Q8IYS4 520 aaPredicted RBP10.75□□□□□ -0.69
LCLAT1-201ENST00000309052 OVOS2A0A0J9YW53 1432 aa10.75□□□□□ -0.69
LCLAT1-201ENST00000309052 OVOS2Q6IE36 1432 aa10.75□□□□□ -0.69
LCLAT1-201ENST00000309052 CDC42BPGQ6DT37 1551 aa10.75□□□□□ -0.69
LCLAT1-201ENST00000309052 GOLGB1Q14789 3259 aaKnown RBP10.75□□□□□ -0.69
LCLAT1-201ENST00000309052 PROSER3Q2NL68 480 aa10.75□□□□□ -0.69
LCLAT1-201ENST00000309052 CWF19L2Q2TBE0 894 aaKnown RBP10.75□□□□□ -0.69
LCLAT1-201ENST00000309052 ZBTB3Q9H5J0 574 aa10.74□□□□□ -0.69
LCLAT1-201ENST00000309052 TRIM6-TRIM34B2RNG4 842 aa10.74□□□□□ -0.69
LCLAT1-201ENST00000309052 RNMTO43148 476 aaKnown RBP10.74□□□□□ -0.69
LCLAT1-201ENST00000309052 MAP4K4O95819 1239 aaPredicted RBP10.74□□□□□ -0.69
LCLAT1-201ENST00000309052 IFNL2Q8IZJ0 200 aa10.74□□□□□ -0.69
LCLAT1-201ENST00000309052 SLKQ9H2G2 1235 aaPredicted RBP10.74□□□□□ -0.69
LCLAT1-201ENST00000309052 MAP3K5Q99683 1374 aa10.74□□□□□ -0.69
LCLAT1-201ENST00000309052 FOXD4L1Q9NU39 408 aa10.74□□□□□ -0.69
LCLAT1-201ENST00000309052 MED14O60244 1454 aa10.74□□□□□ -0.69
LCLAT1-201ENST00000309052 UBTFL1P0CB47 393 aaPredicted RBP10.74□□□□□ -0.69
LCLAT1-201ENST00000309052 AKAP4Q5JQC9 854 aa10.74□□□□□ -0.69
LCLAT1-201ENST00000309052 ZCRB1Q8TBF4 217 aaKnown RBP10.74□□□□□ -0.69
LCLAT1-201ENST00000309052 ZNF496Q96IT1 587 aaPredicted RBP10.74□□□□□ -0.69
LCLAT1-201ENST00000309052 IL16Q14005 1332 aa10.73□□□□□ -0.69
LCLAT1-201ENST00000309052 AMOTQ4VCS5 1084 aa10.73□□□□□ -0.69
LCLAT1-201ENST00000309052 USP16Q9Y5T5 823 aa10.73□□□□□ -0.69
LCLAT1-201ENST00000309052 RILPL2Q969X0 211 aa10.73□□□□□ -0.69
LCLAT1-201ENST00000309052 LRRFIP2Q9Y608 721 aaKnown RBP10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms