RNA–Protein interactions for RNA: ENST00000309017.7

PTPN7-201, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPN7, Length 3,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-201ENST00000309017 TSHZ3Q63HK5 1081 aa13.58□□□□□ -0.24
PTPN7-201ENST00000309017 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.58□□□□□ -0.24
PTPN7-201ENST00000309017 GDPD2Q9HCC8 539 aa13.58□□□□□ -0.24
PTPN7-201ENST00000309017 NSFL1CQ9UNZ2 370 aaKnown RBP13.57□□□□□ -0.24
PTPN7-201ENST00000309017 INO80Q9ULG1 1556 aaPredicted RBP13.57□□□□□ -0.24
PTPN7-201ENST00000309017 MEIS3Q99687 375 aa13.57□□□□□ -0.24
PTPN7-201ENST00000309017 MED14O60244 1454 aa13.57□□□□□ -0.24
PTPN7-201ENST00000309017 PTCH1Q13635 1447 aa13.57□□□□□ -0.24
PTPN7-201ENST00000309017 USP32Q8NFA0 1604 aa13.57□□□□□ -0.24
PTPN7-201ENST00000309017 ZNF500O60304 480 aaPredicted RBP13.57□□□□□ -0.24
PTPN7-201ENST00000309017 NME9Q86XW9 330 aa13.57□□□□□ -0.24
PTPN7-201ENST00000309017 TMX3Q96JJ7 454 aa13.57□□□□□ -0.24
PTPN7-201ENST00000309017 CEP85Q6P2H3 762 aa13.56□□□□□ -0.24
PTPN7-201ENST00000309017 CYP2E1P05181 493 aaPredicted RBP13.56□□□□□ -0.24
PTPN7-201ENST00000309017 WAPLQ7Z5K2 1190 aa13.56□□□□□ -0.24
PTPN7-201ENST00000309017 COG3Q96JB2 828 aa13.56□□□□□ -0.24
PTPN7-201ENST00000309017 TERF1P54274 439 aa13.56□□□□□ -0.24
PTPN7-201ENST00000309017 ZRANB1Q9UGI0 708 aa13.56□□□□□ -0.24
PTPN7-201ENST00000309017 RAPGEF3O95398 923 aa13.55□□□□□ -0.24
PTPN7-201ENST00000309017 UHRF1BP1LA0JNW5 1464 aa13.55□□□□□ -0.24
PTPN7-201ENST00000309017 COL3A1P02461 1466 aaPredicted RBP13.55□□□□□ -0.24
PTPN7-201ENST00000309017 MROH1Q8NDA8 1641 aa13.55□□□□□ -0.24
PTPN7-201ENST00000309017 PHF14O94880 888 aa13.55□□□□□ -0.24
PTPN7-201ENST00000309017 SASS6Q6UVJ0 657 aa13.55□□□□□ -0.24
PTPN7-201ENST00000309017 UPF3BQ9BZI7 483 aaKnown RBP13.55□□□□□ -0.24
PTPN7-201ENST00000309017 EXOC6BQ9Y2D4 811 aa13.55□□□□□ -0.24
PTPN7-201ENST00000309017 ZDHHC9Q9Y397 364 aa13.55□□□□□ -0.24
PTPN7-201ENST00000309017 LRRC7Q96NW7 1537 aa13.55□□□□□ -0.24
PTPN7-201ENST00000309017 ZFYVE9O95405 1425 aa13.55□□□□□ -0.24
PTPN7-201ENST00000309017 SLC4A2P04920 1241 aa13.55□□□□□ -0.24
PTPN7-201ENST00000309017 PDLIM2Q96JY6 352 aa13.55□□□□□ -0.24
PTPN7-201ENST00000309017 ARAP3Q8WWN8 1544 aa13.54□□□□□ -0.24
PTPN7-201ENST00000309017 FAM135BQ49AJ0 1406 aa13.54□□□□□ -0.24
PTPN7-201ENST00000309017 MCM5P33992 734 aa13.54□□□□□ -0.24
PTPN7-201ENST00000309017 MCM10Q7L590 875 aa13.54□□□□□ -0.24
PTPN7-201ENST00000309017 IFT172Q9UG01 1749 aa13.54□□□□□ -0.24
PTPN7-201ENST00000309017 PRDM10Q9NQV6 1147 aa13.54□□□□□ -0.24
PTPN7-201ENST00000309017 PIK3R4Q99570 1358 aa13.54□□□□□ -0.24
PTPN7-201ENST00000309017 DYNC1I1O14576 645 aa13.53□□□□□ -0.24
PTPN7-201ENST00000309017 SULT6B1Q6IMI4 303 aa13.53□□□□□ -0.24
PTPN7-201ENST00000309017 MTERF4Q7Z6M4 381 aaKnown RBP13.53□□□□□ -0.24
PTPN7-201ENST00000309017 ZNF830Q96NB3 372 aaPredicted RBP13.53□□□□□ -0.24
PTPN7-201ENST00000309017 F6X3S4 739 aa13.53□□□□□ -0.24
PTPN7-201ENST00000309017 MCM2P49736 904 aa13.53□□□□□ -0.24
PTPN7-201ENST00000309017 SLC52A1Q9NWF4 448 aa13.53□□□□□ -0.24
PTPN7-201ENST00000309017 PNPLA6Q8IY17 1366 aa13.53□□□□□ -0.24
PTPN7-201ENST00000309017 MIS18AQ9NYP9 233 aa13.52□□□□□ -0.24
PTPN7-201ENST00000309017 MSH6P52701 1360 aa13.52□□□□□ -0.24
PTPN7-201ENST00000309017 ZNF853P0CG23 659 aa13.52□□□□□ -0.25
PTPN7-201ENST00000309017 IL13P35225 146 aa13.52□□□□□ -0.25
PTPN7-201ENST00000309017 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.52□□□□□ -0.25
PTPN7-201ENST00000309017 PDE1AP54750 535 aa13.52□□□□□ -0.25
PTPN7-201ENST00000309017 USP25Q9UHP3 1055 aa13.52□□□□□ -0.25
PTPN7-201ENST00000309017 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.51□□□□□ -0.25
PTPN7-201ENST00000309017 YTHDC2Q9H6S0 1430 aaKnown RBP13.51□□□□□ -0.25
PTPN7-201ENST00000309017 ZC3H13Q5T200 1668 aaKnown RBP13.51□□□□□ -0.25
PTPN7-201ENST00000309017 PPLO60437 1756 aa13.51□□□□□ -0.25
PTPN7-201ENST00000309017 ASXL2Q76L83 1435 aa13.51□□□□□ -0.25
PTPN7-201ENST00000309017 RIMS2Q9UQ26 1411 aa13.51□□□□□ -0.25
PTPN7-201ENST00000309017 AEBP1Q8IUX7 1158 aa13.5□□□□□ -0.25
PTPN7-201ENST00000309017 NECTIN2Q92692 538 aa13.5□□□□□ -0.25
PTPN7-201ENST00000309017 RTF1Q92541 710 aaKnown RBP13.5□□□□□ -0.25
PTPN7-201ENST00000309017 STK31Q9BXU1 1019 aa13.49□□□□□ -0.25
PTPN7-201ENST00000309017 LMTK2Q8IWU2 1503 aa13.49□□□□□ -0.25
PTPN7-201ENST00000309017 GADD45BO75293 160 aaPredicted RBP13.49□□□□□ -0.25
PTPN7-201ENST00000309017 ESYT1Q9BSJ8 1104 aa13.49□□□□□ -0.25
PTPN7-201ENST00000309017 CAMSAP1Q5T5Y3 1602 aa13.49□□□□□ -0.25
PTPN7-201ENST00000309017 RTL1A6NKG5 1358 aa13.49□□□□□ -0.25
PTPN7-201ENST00000309017 BRD1O95696 1058 aa13.48□□□□□ -0.25
PTPN7-201ENST00000309017 TSC1Q92574 1164 aa13.48□□□□□ -0.25
PTPN7-201ENST00000309017 LRRCC1Q9C099 1032 aa13.48□□□□□ -0.25
PTPN7-201ENST00000309017 PALD1Q9ULE6 856 aa13.48□□□□□ -0.25
PTPN7-201ENST00000309017 NUTM2FA1L443 756 aa13.48□□□□□ -0.25
PTPN7-201ENST00000309017 GNAI2P04899 355 aa13.48□□□□□ -0.25
PTPN7-201ENST00000309017 TTC12Q9H892 705 aaPredicted RBP13.48□□□□□ -0.25
PTPN7-201ENST00000309017 ARHGEF28Q8N1W1 1705 aaKnown RBP13.48□□□□□ -0.25
PTPN7-201ENST00000309017 WDR33Q9C0J8 1336 aaKnown RBP13.48□□□□□ -0.25
PTPN7-201ENST00000309017 MX1P20591 662 aa13.48□□□□□ -0.25
PTPN7-201ENST00000309017 FBXO31Q5XUX0 539 aaPredicted RBP13.48□□□□□ -0.25
PTPN7-201ENST00000309017 USP48Q86UV5 1035 aa13.48□□□□□ -0.25
PTPN7-201ENST00000309017 TSPYL4Q9UJ04 414 aa13.48□□□□□ -0.25
PTPN7-201ENST00000309017 FIBPO43427 364 aa13.47□□□□□ -0.25
PTPN7-201ENST00000309017 FKBP5Q13451 457 aaPredicted RBP13.47□□□□□ -0.25
PTPN7-201ENST00000309017 C17orf53Q8N3J3 647 aaPredicted RBP13.47□□□□□ -0.25
PTPN7-201ENST00000309017 LARP6Q9BRS8 491 aaKnown RBP13.47□□□□□ -0.25
PTPN7-201ENST00000309017 ABCA9Q8IUA7 1624 aa13.47□□□□□ -0.25
PTPN7-201ENST00000309017 KIDINS220Q9ULH0 1771 aa13.47□□□□□ -0.25
PTPN7-201ENST00000309017 HCLS1P14317 486 aaPredicted RBP13.47□□□□□ -0.25
PTPN7-201ENST00000309017 PTPRCP08575 1304 aa13.46□□□□□ -0.25
PTPN7-201ENST00000309017 FAM177BA6PVY3 158 aa13.46□□□□□ -0.25
PTPN7-201ENST00000309017 MAP4K4O95819 1239 aaPredicted RBP13.46□□□□□ -0.25
PTPN7-201ENST00000309017 CHAF1AQ13111 956 aaPredicted RBP13.46□□□□□ -0.25
PTPN7-201ENST00000309017 KIF24Q5T7B8 1368 aa13.46□□□□□ -0.25
PTPN7-201ENST00000309017 ADCY5O95622 1261 aa13.46□□□□□ -0.25
PTPN7-201ENST00000309017 NCKAP5LQ9HCH0 1330 aa13.46□□□□□ -0.25
PTPN7-201ENST00000309017 IL1RAPL2Q9NP60 686 aa13.46□□□□□ -0.26
PTPN7-201ENST00000309017 POGZQ7Z3K3 1410 aa13.45□□□□□ -0.26
PTPN7-201ENST00000309017 CCT4P50991 539 aaKnown RBP13.45□□□□□ -0.26
PTPN7-201ENST00000309017 FAM184AQ8NB25 1140 aa13.45□□□□□ -0.26
PTPN7-201ENST00000309017 HMGN5P82970 282 aaKnown RBP13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms