RNA–Protein interactions for RNA: ENST00000307859.4

TRIM40-205, Transcript of tripartite motif containing 40, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM40, Length 1,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-205ENST00000307859 KRT28Q7Z3Y7 464 aa15.39■□□□□ 0.05
TRIM40-205ENST00000307859 TSR2Q969E8 191 aaKnown RBP15.39■□□□□ 0.05
TRIM40-205ENST00000307859 EYA1Q99502 592 aa15.38■□□□□ 0.05
TRIM40-205ENST00000307859 LRRC37A3O60309 1634 aa15.38■□□□□ 0.05
TRIM40-205ENST00000307859 PXDNQ92626 1479 aa15.37■□□□□ 0.05
TRIM40-205ENST00000307859 VIRMAQ69YN4 1812 aaKnown RBP15.36■□□□□ 0.05
TRIM40-205ENST00000307859 XPCQ01831 940 aaPredicted RBP15.36■□□□□ 0.05
TRIM40-205ENST00000307859 EXOSC9Q06265 439 aaKnown RBP15.36■□□□□ 0.05
TRIM40-205ENST00000307859 IP6K1Q92551 441 aa15.36■□□□□ 0.05
TRIM40-205ENST00000307859 IFT57Q9NWB7 429 aa15.36■□□□□ 0.05
TRIM40-205ENST00000307859 ZNF853P0CG23 659 aa15.35■□□□□ 0.05
TRIM40-205ENST00000307859 PDE3AQ14432 1141 aa15.35■□□□□ 0.05
TRIM40-205ENST00000307859 COL18A1P39060 1754 aa15.35■□□□□ 0.05
TRIM40-205ENST00000307859 EP400Q96L91 3159 aa15.34■□□□□ 0.05
TRIM40-205ENST00000307859 YY1P25490 414 aa15.34■□□□□ 0.05
TRIM40-205ENST00000307859 GNAI1P63096 354 aa15.34■□□□□ 0.05
TRIM40-205ENST00000307859 THUMPD2Q9BTF0 503 aaKnown RBP15.34■□□□□ 0.05
TRIM40-205ENST00000307859 NPHP3Q7Z494 1330 aa15.33■□□□□ 0.05
TRIM40-205ENST00000307859 NCAPD2Q15021 1401 aa15.33■□□□□ 0.04
TRIM40-205ENST00000307859 TNS3Q68CZ2 1445 aa15.33■□□□□ 0.04
TRIM40-205ENST00000307859 GCP02774 474 aa15.33■□□□□ 0.04
TRIM40-205ENST00000307859 ARHGEF25Q86VW2 580 aa15.33■□□□□ 0.04
TRIM40-205ENST00000307859 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.33■□□□□ 0.04
TRIM40-205ENST00000307859 LMO7Q8WWI1 1683 aa15.33■□□□□ 0.04
TRIM40-205ENST00000307859 FAM208AQ9UK61 1670 aaKnown RBP15.33■□□□□ 0.04
TRIM40-205ENST00000307859 ABCC6O95255 1503 aa15.32■□□□□ 0.04
TRIM40-205ENST00000307859 PSDA5PKW4 1024 aaPredicted RBP15.32■□□□□ 0.04
TRIM40-205ENST00000307859 UNC5CLQ8IV45 518 aa15.32■□□□□ 0.04
TRIM40-205ENST00000307859 CFAP44Q96MT7 982 aa15.32■□□□□ 0.04
TRIM40-205ENST00000307859 BAG6P46379 1132 aa15.32■□□□□ 0.04
TRIM40-205ENST00000307859 TSHZ2Q9NRE2 1034 aa15.32■□□□□ 0.04
TRIM40-205ENST00000307859 FAM83GA6ND36 823 aa15.31■□□□□ 0.04
TRIM40-205ENST00000307859 ZNF428Q96B54 188 aa15.31■□□□□ 0.04
TRIM40-205ENST00000307859 GLI3P10071 1580 aa15.31■□□□□ 0.04
TRIM40-205ENST00000307859 ABCA3Q99758 1704 aa15.3■□□□□ 0.04
TRIM40-205ENST00000307859 MTHFSDQ2M296 383 aaKnown RBP15.3■□□□□ 0.04
TRIM40-205ENST00000307859 GAS2L2Q8NHY3 880 aa15.3■□□□□ 0.04
TRIM40-205ENST00000307859 MBIPQ9NS73 344 aa15.3■□□□□ 0.04
TRIM40-205ENST00000307859 CRB1P82279 1406 aa15.3■□□□□ 0.04
TRIM40-205ENST00000307859 CANXP27824 592 aaKnown RBP15.29■□□□□ 0.04
TRIM40-205ENST00000307859 ALDH1L2Q3SY69 923 aa15.29■□□□□ 0.04
TRIM40-205ENST00000307859 SLIT2O94813 1529 aa15.29■□□□□ 0.04
TRIM40-205ENST00000307859 ONECUT3O60422 494 aaPredicted RBP15.28■□□□□ 0.04
TRIM40-205ENST00000307859 DCTN1Q14203 1278 aa15.28■□□□□ 0.04
TRIM40-205ENST00000307859 SEPT12Q8IYM1 358 aa15.28■□□□□ 0.04
TRIM40-205ENST00000307859 LTV1Q96GA3 475 aaPredicted RBP15.28■□□□□ 0.04
TRIM40-205ENST00000307859 BCL2L13Q9BXK5 485 aa15.28■□□□□ 0.04
TRIM40-205ENST00000307859 LAS1LQ9Y4W2 734 aaKnown RBP15.28■□□□□ 0.04
TRIM40-205ENST00000307859 LMOD2Q6P5Q4 547 aa15.28■□□□□ 0.04
TRIM40-205ENST00000307859 SSH1Q8WYL5 1049 aa15.28■□□□□ 0.04
TRIM40-205ENST00000307859 FRAT1Q92837 279 aaPredicted RBP15.28■□□□□ 0.04
TRIM40-205ENST00000307859 SMC4Q9NTJ3 1288 aa15.28■□□□□ 0.04
TRIM40-205ENST00000307859 SPATA31A3Q5VYP0 1347 aa15.27■□□□□ 0.04
TRIM40-205ENST00000307859 CACNA1FO60840 1977 aa15.27■□□□□ 0.04
TRIM40-205ENST00000307859 HTATSF1O43719 755 aaKnown RBP15.27■□□□□ 0.03
TRIM40-205ENST00000307859 BRPF1P55201 1214 aaPredicted RBP15.27■□□□□ 0.03
TRIM40-205ENST00000307859 NBPF6Q5VWK0 638 aa15.26■□□□□ 0.03
TRIM40-205ENST00000307859 ZKSCAN2Q63HK3 967 aa15.26■□□□□ 0.03
TRIM40-205ENST00000307859 KRT27Q7Z3Y8 459 aa15.26■□□□□ 0.03
TRIM40-205ENST00000307859 PANK1Q8TE04 598 aa15.26■□□□□ 0.03
TRIM40-205ENST00000307859 NBPF4Q96M43 638 aa15.26■□□□□ 0.03
TRIM40-205ENST00000307859 CHL1O00533 1208 aa15.25■□□□□ 0.03
TRIM40-205ENST00000307859 VAMP4O75379 141 aa15.25■□□□□ 0.03
TRIM40-205ENST00000307859 AAMPQ13685 434 aa15.25■□□□□ 0.03
TRIM40-205ENST00000307859 MCM10Q7L590 875 aa15.25■□□□□ 0.03
TRIM40-205ENST00000307859 KDM2BQ8NHM5 1336 aa15.25■□□□□ 0.03
TRIM40-205ENST00000307859 KIF16BQ96L93 1317 aa15.25■□□□□ 0.03
TRIM40-205ENST00000307859 BRWD3Q6RI45 1802 aa15.25■□□□□ 0.03
TRIM40-205ENST00000307859 MAP3K5Q99683 1374 aa15.25■□□□□ 0.03
TRIM40-205ENST00000307859 MS4A1P11836 297 aa15.25■□□□□ 0.03
TRIM40-205ENST00000307859 RLBP1P12271 317 aa15.25■□□□□ 0.03
TRIM40-205ENST00000307859 KIAA0232Q92628 1395 aa15.24■□□□□ 0.03
TRIM40-205ENST00000307859 KDM3BQ7LBC6 1761 aa15.24■□□□□ 0.03
TRIM40-205ENST00000307859 VPS72Q15906 364 aa15.24■□□□□ 0.03
TRIM40-205ENST00000307859 IFFO2Q5TF58 517 aa15.24■□□□□ 0.03
TRIM40-205ENST00000307859 USHBP1Q8N6Y0 703 aa15.24■□□□□ 0.03
TRIM40-205ENST00000307859 TSPYL6Q8N831 410 aa15.24■□□□□ 0.03
TRIM40-205ENST00000307859 RTF1Q92541 710 aaKnown RBP15.24■□□□□ 0.03
TRIM40-205ENST00000307859 TNNQ9UQP3 1299 aa15.24■□□□□ 0.03
TRIM40-205ENST00000307859 COG6Q9Y2V7 657 aa15.24■□□□□ 0.03
TRIM40-205ENST00000307859 ADAMTS7Q9UKP4 1686 aa15.23■□□□□ 0.03
TRIM40-205ENST00000307859 ZBTB7CA1YPR0 619 aa15.23■□□□□ 0.03
TRIM40-205ENST00000307859 GNAT3A8MTJ3 354 aa15.23■□□□□ 0.03
TRIM40-205ENST00000307859 ANKRD24Q8TF21 1146 aa15.23■□□□□ 0.03
TRIM40-205ENST00000307859 CPDO75976 1380 aa15.23■□□□□ 0.03
TRIM40-205ENST00000307859 SIPA1L3O60292 1781 aaPredicted RBP15.22■□□□□ 0.03
TRIM40-205ENST00000307859 R3HDM1Q15032 1099 aaKnown RBP15.22■□□□□ 0.03
TRIM40-205ENST00000307859 TWISTNBQ3B726 338 aaPredicted RBP15.22■□□□□ 0.03
TRIM40-205ENST00000307859 ATF7IPQ6VMQ6 1270 aa15.22■□□□□ 0.03
TRIM40-205ENST00000307859 C8orf58Q8NAV2 365 aa15.22■□□□□ 0.03
TRIM40-205ENST00000307859 AXIN2Q9Y2T1 843 aa15.22■□□□□ 0.03
TRIM40-205ENST00000307859 TRIM27P14373 513 aa15.21■□□□□ 0.03
TRIM40-205ENST00000307859 CENPQQ7L2Z9 268 aaPredicted RBP15.21■□□□□ 0.03
TRIM40-205ENST00000307859 DZIP1LQ8IYY4 767 aaKnown RBP15.21■□□□□ 0.03
TRIM40-205ENST00000307859 NOB1Q9ULX3 412 aaKnown RBP15.21■□□□□ 0.03
TRIM40-205ENST00000307859 ERBB3P21860 1342 aa15.21■□□□□ 0.03
TRIM40-205ENST00000307859 DISP2A7MBM2 1401 aa15.21■□□□□ 0.02
TRIM40-205ENST00000307859 IPO8O15397 1037 aaKnown RBP15.21■□□□□ 0.02
TRIM40-205ENST00000307859 MVPQ14764 893 aaKnown RBP15.21■□□□□ 0.02
TRIM40-205ENST00000307859 MRPL50Q8N5N7 158 aaKnown RBP15.21■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms