RNA–Protein interactions for RNA: ENST00000306641.1

CSPG4P1Y-201, Transcript of CSPG4 pseudogene 1 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P1Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P1Y-201ENST00000306641 DIAPH1O60610 1272 aaKnown RBP14.79□□□□□ -0.04
CSPG4P1Y-201ENST00000306641 UPF1Q92900 1129 aaKnown RBP eCLIP14.79□□□□□ -0.04
CSPG4P1Y-201ENST00000306641 NHSQ6T4R5 1651 aa14.78□□□□□ -0.04
CSPG4P1Y-201ENST00000306641 VIRMAQ69YN4 1812 aaKnown RBP14.78□□□□□ -0.04
CSPG4P1Y-201ENST00000306641 PLEKHG2Q9H7P9 1386 aa14.77□□□□□ -0.04
CSPG4P1Y-201ENST00000306641 PCDH11XQ9BZA7 1347 aa14.77□□□□□ -0.04
CSPG4P1Y-201ENST00000306641 PCDH11YQ9BZA8 1340 aa14.77□□□□□ -0.04
CSPG4P1Y-201ENST00000306641 IL13P35225 146 aa14.77□□□□□ -0.05
CSPG4P1Y-201ENST00000306641 CCDC125Q86Z20 511 aa14.77□□□□□ -0.05
CSPG4P1Y-201ENST00000306641 ZCRB1Q8TBF4 217 aaKnown RBP14.77□□□□□ -0.05
CSPG4P1Y-201ENST00000306641 MYBBP1AQ9BQG0 1328 aaKnown RBP14.76□□□□□ -0.05
CSPG4P1Y-201ENST00000306641 U2SURPO15042 1029 aaKnown RBP14.76□□□□□ -0.05
CSPG4P1Y-201ENST00000306641 MARCH10Q8NA82 808 aaPredicted RBP14.76□□□□□ -0.05
CSPG4P1Y-201ENST00000306641 DDX54Q8TDD1 881 aaKnown RBP14.76□□□□□ -0.05
CSPG4P1Y-201ENST00000306641 NUDCQ9Y266 331 aa14.76□□□□□ -0.05
CSPG4P1Y-201ENST00000306641 SULT6B1Q6IMI4 303 aa14.75□□□□□ -0.05
CSPG4P1Y-201ENST00000306641 SPG7Q9UQ90 795 aa14.75□□□□□ -0.05
CSPG4P1Y-201ENST00000306641 BCL9O00512 1426 aa14.75□□□□□ -0.05
CSPG4P1Y-201ENST00000306641 BTAF1O14981 1849 aa14.74□□□□□ -0.05
CSPG4P1Y-201ENST00000306641 RGPD3A6NKT7 1758 aaPredicted RBP14.74□□□□□ -0.05
CSPG4P1Y-201ENST00000306641 RGPD4Q7Z3J3 1758 aa14.74□□□□□ -0.05
CSPG4P1Y-201ENST00000306641 KDRP35968 1356 aa14.73□□□□□ -0.05
CSPG4P1Y-201ENST00000306641 ITGB4P16144 1822 aa14.73□□□□□ -0.05
CSPG4P1Y-201ENST00000306641 TRIM37O94972 964 aa14.73□□□□□ -0.05
CSPG4P1Y-201ENST00000306641 HMOX1P09601 288 aa14.72□□□□□ -0.05
CSPG4P1Y-201ENST00000306641 BAG6P46379 1132 aa14.72□□□□□ -0.05
CSPG4P1Y-201ENST00000306641 AEBP1Q8IUX7 1158 aa14.72□□□□□ -0.05
CSPG4P1Y-201ENST00000306641 PRKRIP1Q9H875 184 aaPredicted RBP14.72□□□□□ -0.05
CSPG4P1Y-201ENST00000306641 TOGARAM1Q9Y4F4 1720 aa14.72□□□□□ -0.05
CSPG4P1Y-201ENST00000306641 ANP32CO43423 234 aa14.71□□□□□ -0.05
CSPG4P1Y-201ENST00000306641 AMOTQ4VCS5 1084 aa14.71□□□□□ -0.05
CSPG4P1Y-201ENST00000306641 PLEKHO1Q53GL0 409 aaPredicted RBP14.71□□□□□ -0.05
CSPG4P1Y-201ENST00000306641 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.71□□□□□ -0.05
CSPG4P1Y-201ENST00000306641 EP400Q96L91 3159 aa14.71□□□□□ -0.05
CSPG4P1Y-201ENST00000306641 ACSBG1Q96GR2 724 aa14.7□□□□□ -0.06
CSPG4P1Y-201ENST00000306641 SCN11AQ9UI33 1791 aa14.7□□□□□ -0.06
CSPG4P1Y-201ENST00000306641 RREB1Q92766 1687 aa14.69□□□□□ -0.06
CSPG4P1Y-201ENST00000306641 U2AF1L5P0DN76 240 aaPredicted RBP14.69□□□□□ -0.06
CSPG4P1Y-201ENST00000306641 U2AF1Q01081 240 aaKnown RBP eCLIP14.69□□□□□ -0.06
CSPG4P1Y-201ENST00000306641 IFNL2Q8IZJ0 200 aa14.69□□□□□ -0.06
CSPG4P1Y-201ENST00000306641 APBA3O96018 575 aa14.68□□□□□ -0.06
CSPG4P1Y-201ENST00000306641 C1orf141Q5JVX7 400 aa14.68□□□□□ -0.06
CSPG4P1Y-201ENST00000306641 ZNF530Q6P9A1 599 aaPredicted RBP14.68□□□□□ -0.06
CSPG4P1Y-201ENST00000306641 SYTL4Q96C24 671 aaPredicted RBP14.68□□□□□ -0.06
CSPG4P1Y-201ENST00000306641 BCL11BQ9C0K0 894 aaPredicted RBP14.68□□□□□ -0.06
CSPG4P1Y-201ENST00000306641 CYP27B1O15528 508 aa14.67□□□□□ -0.06
CSPG4P1Y-201ENST00000306641 NEFMP07197 916 aa14.67□□□□□ -0.06
CSPG4P1Y-201ENST00000306641 HSP90AB1P08238 724 aaKnown RBP14.67□□□□□ -0.06
CSPG4P1Y-201ENST00000306641 NUP188Q5SRE5 1749 aa14.66□□□□□ -0.06
CSPG4P1Y-201ENST00000306641 PHKG2P15735 406 aa14.66□□□□□ -0.06
CSPG4P1Y-201ENST00000306641 DEFB132Q7Z7B7 95 aa14.66□□□□□ -0.06
CSPG4P1Y-201ENST00000306641 DLG5Q8TDM6 1919 aa14.66□□□□□ -0.06
CSPG4P1Y-201ENST00000306641 PRKAR2BP31323 418 aa14.65□□□□□ -0.06
CSPG4P1Y-201ENST00000306641 LY75O60449 1722 aa14.64□□□□□ -0.07
CSPG4P1Y-201ENST00000306641 EN1Q05925 392 aaPredicted RBP14.64□□□□□ -0.07
CSPG4P1Y-201ENST00000306641 WDR43Q15061 677 aaKnown RBP eCLIP14.64□□□□□ -0.07
CSPG4P1Y-201ENST00000306641 RSPH6AQ9H0K4 717 aa14.64□□□□□ -0.07
CSPG4P1Y-201ENST00000306641 PNNQ9H307 717 aaKnown RBP14.64□□□□□ -0.07
CSPG4P1Y-201ENST00000306641 KCNQ2O43526 872 aa14.63□□□□□ -0.07
CSPG4P1Y-201ENST00000306641 FCHSD2O94868 740 aa14.63□□□□□ -0.07
CSPG4P1Y-201ENST00000306641 PRIM1P49642 420 aaKnown RBP14.63□□□□□ -0.07
CSPG4P1Y-201ENST00000306641 NKX1-1Q15270 411 aaPredicted RBP14.63□□□□□ -0.07
CSPG4P1Y-201ENST00000306641 AKAP4Q5JQC9 854 aa14.63□□□□□ -0.07
CSPG4P1Y-201ENST00000306641 GAS2L2Q8NHY3 880 aa14.63□□□□□ -0.07
CSPG4P1Y-201ENST00000306641 DCAF5Q96JK2 942 aa14.62□□□□□ -0.07
CSPG4P1Y-201ENST00000306641 PLSCR1O15162 318 aa14.61□□□□□ -0.07
CSPG4P1Y-201ENST00000306641 EZH2Q15910 746 aaKnown RBP14.61□□□□□ -0.07
CSPG4P1Y-201ENST00000306641 ADAMTS7Q9UKP4 1686 aa14.61□□□□□ -0.07
CSPG4P1Y-201ENST00000306641 MAPK8IP3Q9UPT6 1336 aa14.61□□□□□ -0.07
CSPG4P1Y-201ENST00000306641 MAP3K5Q99683 1374 aa14.6□□□□□ -0.07
CSPG4P1Y-201ENST00000306641 KDM6AO15550 1401 aaPredicted RBP14.6□□□□□ -0.07
CSPG4P1Y-201ENST00000306641 MTHFSDQ2M296 383 aaKnown RBP14.6□□□□□ -0.07
CSPG4P1Y-201ENST00000306641 MPRIPQ6WCQ1 1025 aa14.6□□□□□ -0.07
CSPG4P1Y-201ENST00000306641 PTF1AQ7RTS3 328 aa14.6□□□□□ -0.07
CSPG4P1Y-201ENST00000306641 TMOD3Q9NYL9 352 aa14.6□□□□□ -0.07
CSPG4P1Y-201ENST00000306641 CAMKK2Q96RR4 588 aa14.59□□□□□ -0.07
CSPG4P1Y-201ENST00000306641 MRC1P22897 1456 aa14.58□□□□□ -0.08
CSPG4P1Y-201ENST00000306641 SIPA1L3O60292 1781 aaPredicted RBP14.58□□□□□ -0.08
CSPG4P1Y-201ENST00000306641 TAF1LQ8IZX4 1826 aa14.58□□□□□ -0.08
CSPG4P1Y-201ENST00000306641 ERVV-2B6SEH9 535 aa14.58□□□□□ -0.08
CSPG4P1Y-201ENST00000306641 CABP4P57796 275 aa14.58□□□□□ -0.08
CSPG4P1Y-201ENST00000306641 C5P01031 1676 aa14.58□□□□□ -0.08
CSPG4P1Y-201ENST00000306641 PAPPAQ13219 1627 aa14.57□□□□□ -0.08
CSPG4P1Y-201ENST00000306641 GNAT3A8MTJ3 354 aa14.57□□□□□ -0.08
CSPG4P1Y-201ENST00000306641 RTF1Q92541 710 aaKnown RBP14.56□□□□□ -0.08
CSPG4P1Y-201ENST00000306641 SMARCC1Q92922 1105 aaPredicted RBP14.56□□□□□ -0.08
CSPG4P1Y-201ENST00000306641 PHACTR3Q96KR7 559 aa14.56□□□□□ -0.08
CSPG4P1Y-201ENST00000306641 MRS2Q9HD23 443 aa14.56□□□□□ -0.08
CSPG4P1Y-201ENST00000306641 PALLDQ8WX93 1383 aa14.56□□□□□ -0.08
CSPG4P1Y-201ENST00000306641 RNMTO43148 476 aaKnown RBP14.55□□□□□ -0.08
CSPG4P1Y-201ENST00000306641 TXNRD1Q16881 649 aa14.55□□□□□ -0.08
CSPG4P1Y-201ENST00000306641 NBPF14Q5TI25 921 aa14.55□□□□□ -0.08
CSPG4P1Y-201ENST00000306641 PIGBQ92521 554 aa14.55□□□□□ -0.08
CSPG4P1Y-201ENST00000306641 SLC27A3Q5K4L6 730 aa14.54□□□□□ -0.08
CSPG4P1Y-201ENST00000306641 PLEKHF1Q96S99 279 aa14.54□□□□□ -0.08
CSPG4P1Y-201ENST00000306641 ZNF831Q5JPB2 1677 aa14.53□□□□□ -0.08
CSPG4P1Y-201ENST00000306641 TEFQ10587 303 aa14.53□□□□□ -0.08
CSPG4P1Y-201ENST00000306641 SLC52A2Q9HAB3 445 aa14.53□□□□□ -0.08
CSPG4P1Y-201ENST00000306641 TUBGCP6Q96RT7 1819 aa14.52□□□□□ -0.08
CSPG4P1Y-201ENST00000306641 UBR2Q8IWV8 1755 aa14.52□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms