RNA–Protein interactions for RNA: ENST00000306256.13

RER1-201, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 5

Gene RER1, Length 695 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-201ENST00000306256 ZCRB1Q8TBF4 217 aaKnown RBP28.55■■■□□ 2.16
RER1-201ENST00000306256 LRRC4BQ9NT99 713 aa28.55■■■□□ 2.16
RER1-201ENST00000306256 CLSPNQ9HAW4 1339 aa28.54■■■□□ 2.16
RER1-201ENST00000306256 SYTL4Q96C24 671 aaPredicted RBP28.54■■■□□ 2.16
RER1-201ENST00000306256 ZNF827Q17R98 1081 aa28.53■■■□□ 2.16
RER1-201ENST00000306256 HSP90AB2PQ58FF8 381 aa28.53■■■□□ 2.16
RER1-201ENST00000306256 PRIM1P49642 420 aaKnown RBP28.52■■■□□ 2.16
RER1-201ENST00000306256 TUBGCP6Q96RT7 1819 aa28.52■■■□□ 2.16
RER1-201ENST00000306256 LY75O60449 1722 aa28.52■■■□□ 2.16
RER1-201ENST00000306256 INSRP06213 1382 aa28.51■■■□□ 2.16
RER1-201ENST00000306256 FLT4P35916 1363 aa28.51■■■□□ 2.16
RER1-201ENST00000306256 MAP2P11137 1827 aaKnown RBP28.51■■■□□ 2.15
RER1-201ENST00000306256 NSD2O96028 1365 aa28.5■■■□□ 2.15
RER1-201ENST00000306256 QSER1Q2KHR3 1735 aa28.49■■■□□ 2.15
RER1-201ENST00000306256 MTFR1LQ9H019 292 aa28.49■■■□□ 2.15
RER1-201ENST00000306256 RAPGEF4Q8WZA2 1011 aa28.48■■■□□ 2.15
RER1-201ENST00000306256 EMILIN1Q9Y6C2 1016 aa28.48■■■□□ 2.15
RER1-201ENST00000306256 ANKRD26Q9UPS8 1709 aa28.48■■■□□ 2.15
RER1-201ENST00000306256 KCNQ4P56696 695 aa28.47■■■□□ 2.15
RER1-201ENST00000306256 POLR3GLQ9BT43 218 aa28.47■■■□□ 2.15
RER1-201ENST00000306256 KIF24Q5T7B8 1368 aa28.47■■■□□ 2.15
RER1-201ENST00000306256 CGNL1Q0VF96 1302 aa28.45■■■□□ 2.15
RER1-201ENST00000306256 TATP17735 454 aaPredicted RBP28.45■■■□□ 2.14
RER1-201ENST00000306256 SLC27A3Q5K4L6 730 aa28.45■■■□□ 2.14
RER1-201ENST00000306256 AKT1S1Q96B36 256 aa28.44■■■□□ 2.14
RER1-201ENST00000306256 SGIP1Q9BQI5 828 aa28.44■■■□□ 2.14
RER1-201ENST00000306256 DCAF8L1A6NGE4 600 aa28.42■■■□□ 2.14
RER1-201ENST00000306256 PPM1GO15355 546 aaPredicted RBP28.42■■■□□ 2.14
RER1-201ENST00000306256 PKD1L3Q7Z443 1732 aa28.41■■■□□ 2.14
RER1-201ENST00000306256 FHDC1Q9C0D6 1143 aaPredicted RBP28.41■■■□□ 2.14
RER1-201ENST00000306256 ITGB4P16144 1822 aa28.41■■■□□ 2.14
RER1-201ENST00000306256 TOGARAM1Q9Y4F4 1720 aa28.4■■■□□ 2.14
RER1-201ENST00000306256 YY1P25490 414 aa28.4■■■□□ 2.14
RER1-201ENST00000306256 PCDH11XQ9BZA7 1347 aa28.39■■■□□ 2.13
RER1-201ENST00000306256 PCDH11YQ9BZA8 1340 aa28.39■■■□□ 2.13
RER1-201ENST00000306256 PNPLA7Q6ZV29 1317 aa28.38■■■□□ 2.13
RER1-201ENST00000306256 SYT17Q9BSW7 474 aa28.37■■■□□ 2.13
RER1-201ENST00000306256 CCNL1Q9UK58 526 aaPredicted RBP28.37■■■□□ 2.13
RER1-201ENST00000306256 COL24A1Q17RW2 1714 aa28.36■■■□□ 2.13
RER1-201ENST00000306256 ARXQ96QS3 562 aa28.36■■■□□ 2.13
RER1-201ENST00000306256 TFCP2L1Q9NZI6 479 aa28.36■■■□□ 2.13
RER1-201ENST00000306256 NCAPD2Q15021 1401 aa28.35■■■□□ 2.13
RER1-201ENST00000306256 CYP27B1O15528 508 aa28.35■■■□□ 2.13
RER1-201ENST00000306256 HSPA5P11021 654 aaKnown RBP28.35■■■□□ 2.13
RER1-201ENST00000306256 C5P01031 1676 aa28.35■■■□□ 2.13
RER1-201ENST00000306256 TAF1LQ8IZX4 1826 aa28.34■■■□□ 2.13
RER1-201ENST00000306256 EIF4G2P78344 907 aaKnown RBP eCLIP28.34■■■□□ 2.13
RER1-201ENST00000306256 CCER1Q8TC90 406 aaPredicted RBP28.34■■■□□ 2.13
RER1-201ENST00000306256 WASHC2AQ641Q2 1341 aa28.33■■■□□ 2.13
RER1-201ENST00000306256 TNNT2P45379 298 aaPredicted RBP28.32■■■□□ 2.12
RER1-201ENST00000306256 POLKQ9UBT6 870 aa28.31■■■□□ 2.12
RER1-201ENST00000306256 SLC16A10Q8TF71 515 aa28.3■■■□□ 2.12
RER1-201ENST00000306256 MPRIPQ6WCQ1 1025 aa28.29■■■□□ 2.12
RER1-201ENST00000306256 EYA1Q99502 592 aa28.29■■■□□ 2.12
RER1-201ENST00000306256 CHD4Q14839 1912 aa28.29■■■□□ 2.12
RER1-201ENST00000306256 PALLDQ8WX93 1383 aa28.27■■■□□ 2.12
RER1-201ENST00000306256 MAP3K5Q99683 1374 aa28.26■■■□□ 2.12
RER1-201ENST00000306256 KLHL34Q8N239 644 aa28.26■■■□□ 2.11
RER1-201ENST00000306256 PANK3Q9H999 370 aa28.26■■■□□ 2.11
RER1-201ENST00000306256 POLD1P28340 1107 aa28.25■■■□□ 2.11
RER1-201ENST00000306256 SPG7Q9UQ90 795 aa28.24■■■□□ 2.11
RER1-201ENST00000306256 MSH5O43196 834 aa28.23■■■□□ 2.11
RER1-201ENST00000306256 EIF4A2Q14240 407 aaKnown RBP28.23■■■□□ 2.11
RER1-201ENST00000306256 COL23A1Q86Y22 540 aaPredicted RBP28.22■■■□□ 2.11
RER1-201ENST00000306256 C4BP0C0L5 1744 aa28.21■■■□□ 2.11
RER1-201ENST00000306256 NKX1-1Q15270 411 aaPredicted RBP28.21■■■□□ 2.11
RER1-201ENST00000306256 PIGBQ92521 554 aa28.2■■■□□ 2.1
RER1-201ENST00000306256 UBR3Q6ZT12 1888 aa28.19■■■□□ 2.1
RER1-201ENST00000306256 MSL1Q68DK7 614 aa28.18■■■□□ 2.1
RER1-201ENST00000306256 SMARCC1Q92922 1105 aaPredicted RBP28.18■■■□□ 2.1
RER1-201ENST00000306256 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.17■■■□□ 2.1
RER1-201ENST00000306256 PHKG2P15735 406 aa28.15■■■□□ 2.1
RER1-201ENST00000306256 IFNL2Q8IZJ0 200 aa28.14■■■□□ 2.1
RER1-201ENST00000306256 TMOD3Q9NYL9 352 aa28.14■■■□□ 2.1
RER1-201ENST00000306256 IGSF1Q8N6C5 1336 aa28.14■■■□□ 2.09
RER1-201ENST00000306256 GPR162Q16538 588 aa28.13■■■□□ 2.09
RER1-201ENST00000306256 NLGN2Q8NFZ4 835 aa28.13■■■□□ 2.09
RER1-201ENST00000306256 UTRNP46939 3433 aa28.11■■■□□ 2.09
RER1-201ENST00000306256 MORC1Q86VD1 984 aa28.11■■■□□ 2.09
RER1-201ENST00000306256 AMIGO3Q86WK7 504 aa28.11■■■□□ 2.09
RER1-201ENST00000306256 PELP1Q8IZL8 1130 aaKnown RBP28.11■■■□□ 2.09
RER1-201ENST00000306256 AK7Q96M32 723 aa28.11■■■□□ 2.09
RER1-201ENST00000306256 ASAP1Q9ULH1 1129 aa28.11■■■□□ 2.09
RER1-201ENST00000306256 SMIM5Q71RC9 77 aa28.1■■■□□ 2.09
RER1-201ENST00000306256 LOC102724428A0A0B4J2F2 783 aa28.09■■■□□ 2.09
RER1-201ENST00000306256 SIK1P57059 783 aa28.09■■■□□ 2.09
RER1-201ENST00000306256 FLAD1Q8NFF5 587 aa28.09■■■□□ 2.09
RER1-201ENST00000306256 HMGB2P26583 209 aaKnown RBP28.08■■■□□ 2.09
RER1-201ENST00000306256 LINC00116Q8NCU8 138 aa28.08■■■□□ 2.09
RER1-201ENST00000306256 PHF14O94880 888 aa28.07■■■□□ 2.08
RER1-201ENST00000306256 ZNF784Q8NCA9 323 aaPredicted RBP28.07■■■□□ 2.08
RER1-201ENST00000306256 KNSTRNQ9Y448 316 aa28.07■■■□□ 2.08
RER1-201ENST00000306256 PLEKHG2Q9H7P9 1386 aa28.07■■■□□ 2.08
RER1-201ENST00000306256 AEBP1Q8IUX7 1158 aa28.05■■■□□ 2.08
RER1-201ENST00000306256 KIF7Q2M1P5 1343 aa28.04■■■□□ 2.08
RER1-201ENST00000306256 ITPK1Q13572 414 aa28.04■■■□□ 2.08
RER1-201ENST00000306256 ATG3Q9NT62 314 aa28.04■■■□□ 2.08
RER1-201ENST00000306256 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28.03■■■□□ 2.08
RER1-201ENST00000306256 ATP6V1AP38606 617 aa28.02■■■□□ 2.08
RER1-201ENST00000306256 PLEKHO1Q53GL0 409 aaPredicted RBP28.02■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms