RNA–Protein interactions for RNA: ENST00000306085.10

TRIM56-201, Transcript of tripartite motif containing 56, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM56, Length 10,952 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-201ENST00000306085 PSMC4P43686 418 aa15.63■□□□□ 0.09
TRIM56-201ENST00000306085 IRX3P78415 501 aaPredicted RBP15.63■□□□□ 0.09
TRIM56-201ENST00000306085 CAMK4Q16566 473 aa15.63■□□□□ 0.09
TRIM56-201ENST00000306085 DIAPH1O60610 1272 aaKnown RBP15.62■□□□□ 0.09
TRIM56-201ENST00000306085 HMOX1P09601 288 aa15.62■□□□□ 0.09
TRIM56-201ENST00000306085 TNIKQ9UKE5 1360 aa15.62■□□□□ 0.09
TRIM56-201ENST00000306085 KIF18AQ8NI77 898 aa15.62■□□□□ 0.09
TRIM56-201ENST00000306085 WDR33Q9C0J8 1336 aaKnown RBP15.62■□□□□ 0.09
TRIM56-201ENST00000306085 NOL3O60936 208 aaKnown RBP15.62■□□□□ 0.09
TRIM56-201ENST00000306085 LARP1BQ659C4 914 aaKnown RBP15.62■□□□□ 0.09
TRIM56-201ENST00000306085 NUP62CLQ9H1M0 184 aa15.62■□□□□ 0.09
TRIM56-201ENST00000306085 ANKRD30AQ9BXX3 1397 aa15.62■□□□□ 0.09
TRIM56-201ENST00000306085 ANKRD1Q15327 319 aa15.62■□□□□ 0.09
TRIM56-201ENST00000306085 MAP4K4O95819 1239 aaPredicted RBP15.62■□□□□ 0.09
TRIM56-201ENST00000306085 SFPQP23246 707 aaKnown RBP eCLIP15.62■□□□□ 0.09
TRIM56-201ENST00000306085 CCDC150Q8NCX0 1101 aa15.62■□□□□ 0.09
TRIM56-201ENST00000306085 SSX2IPQ9Y2D8 614 aa15.62■□□□□ 0.09
TRIM56-201ENST00000306085 LMAN1P49257 510 aa15.61■□□□□ 0.09
TRIM56-201ENST00000306085 ZNF428Q96B54 188 aa15.61■□□□□ 0.09
TRIM56-201ENST00000306085 CNNM1Q9NRU3 951 aa15.61■□□□□ 0.09
TRIM56-201ENST00000306085 IKBKGQ9Y6K9 419 aa15.61■□□□□ 0.09
TRIM56-201ENST00000306085 CCDC96Q2M329 555 aa15.61■□□□□ 0.09
TRIM56-201ENST00000306085 SMARCC1Q92922 1105 aaPredicted RBP15.61■□□□□ 0.09
TRIM56-201ENST00000306085 DRC1Q96MC2 740 aa15.61■□□□□ 0.09
TRIM56-201ENST00000306085 UBA5Q9GZZ9 404 aa15.61■□□□□ 0.09
TRIM56-201ENST00000306085 MINK1Q8N4C8 1332 aaPredicted RBP15.61■□□□□ 0.09
TRIM56-201ENST00000306085 KIF3CO14782 793 aa15.61■□□□□ 0.09
TRIM56-201ENST00000306085 KLHL10Q6JEL2 608 aa15.61■□□□□ 0.09
TRIM56-201ENST00000306085 PAIP2Q9BPZ3 127 aaKnown RBP15.61■□□□□ 0.09
TRIM56-201ENST00000306085 CACNA2D4Q7Z3S7 1137 aa15.6■□□□□ 0.09
TRIM56-201ENST00000306085 BBXQ8WY36 941 aaPredicted RBP15.6■□□□□ 0.09
TRIM56-201ENST00000306085 A0A1W2PRG0 241 aa15.6■□□□□ 0.09
TRIM56-201ENST00000306085 ZSCAN12O43309 604 aa15.6■□□□□ 0.09
TRIM56-201ENST00000306085 ESPNB1AK53 854 aa15.6■□□□□ 0.09
TRIM56-201ENST00000306085 HSPA4P34932 840 aa15.6■□□□□ 0.09
TRIM56-201ENST00000306085 KIF4BQ2VIQ3 1234 aa15.6■□□□□ 0.09
TRIM56-201ENST00000306085 FAM114A1Q8IWE2 563 aa15.6■□□□□ 0.09
TRIM56-201ENST00000306085 SURF6O75683 361 aaKnown RBP15.6■□□□□ 0.09
TRIM56-201ENST00000306085 KIF2AO00139 706 aaPredicted RBP15.6■□□□□ 0.09
TRIM56-201ENST00000306085 CEP112Q8N8E3 955 aa15.6■□□□□ 0.09
TRIM56-201ENST00000306085 WRNQ14191 1432 aaPredicted RBP eCLIP15.59■□□□□ 0.093e-7■■□□□ 13.1
TRIM56-201ENST00000306085 MSL1Q68DK7 614 aa15.59■□□□□ 0.09
TRIM56-201ENST00000306085 SREK1Q8WXA9 508 aaKnown RBP15.59■□□□□ 0.09
TRIM56-201ENST00000306085 RPUSD2Q8IZ73 545 aaKnown RBP15.59■□□□□ 0.09
TRIM56-201ENST00000306085 USP5P45974 858 aa15.59■□□□□ 0.09
TRIM56-201ENST00000306085 PRPF4BQ13523 1007 aaKnown RBP15.59■□□□□ 0.09
TRIM56-201ENST00000306085 TTC36A6NLP5 189 aa15.59■□□□□ 0.09
TRIM56-201ENST00000306085 CDKL5O76039 1030 aa15.59■□□□□ 0.09
TRIM56-201ENST00000306085 NUP88Q99567 741 aaPredicted RBP15.59■□□□□ 0.09
TRIM56-201ENST00000306085 NACAP1Q9BZK3 213 aa15.59■□□□□ 0.09
TRIM56-201ENST00000306085 ZMYND15Q9H091 742 aa15.59■□□□□ 0.09
TRIM56-201ENST00000306085 TMEM87AQ8NBN3 555 aa15.59■□□□□ 0.09
TRIM56-201ENST00000306085 URI1O94763 535 aaPredicted RBP15.58■□□□□ 0.09
TRIM56-201ENST00000306085 SYCE3A1L190 88 aa15.58■□□□□ 0.09
TRIM56-201ENST00000306085 FKBP15Q5T1M5 1219 aa15.58■□□□□ 0.09
TRIM56-201ENST00000306085 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.58■□□□□ 0.09
TRIM56-201ENST00000306085 V9GYY5 206 aaPredicted RBP15.58■□□□□ 0.09
TRIM56-201ENST00000306085 TPD52P55327 224 aaPredicted RBP15.58■□□□□ 0.08
TRIM56-201ENST00000306085 ST20-MTHFSA0A0A6YYL1 179 aa15.58■□□□□ 0.08
TRIM56-201ENST00000306085 HYPKQ9NX55 129 aa15.58■□□□□ 0.08
TRIM56-201ENST00000306085 CCDC158Q5M9N0 1113 aa15.57■□□□□ 0.08
TRIM56-201ENST00000306085 FERMT2Q96AC1 680 aa15.57■□□□□ 0.08
TRIM56-201ENST00000306085 CEP83Q9Y592 693 aa15.57■□□□□ 0.08
TRIM56-201ENST00000306085 DDX46Q7L014 1031 aaKnown RBP15.57■□□□□ 0.08
TRIM56-201ENST00000306085 C1orf115Q9H7X2 142 aa15.57■□□□□ 0.08
TRIM56-201ENST00000306085 ANAPC4Q9UJX5 808 aa15.57■□□□□ 0.08
TRIM56-201ENST00000306085 PPP4R3BQ5MIZ7 849 aa15.57■□□□□ 0.08
TRIM56-201ENST00000306085 PPP4R3AQ6IN85 833 aa15.57■□□□□ 0.08
TRIM56-201ENST00000306085 L3MBTL2Q969R5 705 aa15.57■□□□□ 0.08
TRIM56-201ENST00000306085 TMCO4Q5TGY1 634 aa15.57■□□□□ 0.08
TRIM56-201ENST00000306085 SIL1Q9H173 461 aa15.56■□□□□ 0.08
TRIM56-201ENST00000306085 TSG101Q99816 390 aa15.56■□□□□ 0.08
TRIM56-201ENST00000306085 VGFO15240 615 aaPredicted RBP15.56■□□□□ 0.08
TRIM56-201ENST00000306085 MAP3K11Q16584 847 aa15.56■□□□□ 0.08
TRIM56-201ENST00000306085 PRDM2Q13029 1718 aa15.56■□□□□ 0.08
TRIM56-201ENST00000306085 GNAI1P63096 354 aa15.56■□□□□ 0.08
TRIM56-201ENST00000306085 ALS2CR12Q96Q35 445 aa15.56■□□□□ 0.08
TRIM56-201ENST00000306085 FLIIQ13045 1269 aa15.56■□□□□ 0.08
TRIM56-201ENST00000306085 C16orf45Q96MC5 204 aaPredicted RBP15.56■□□□□ 0.08
TRIM56-201ENST00000306085 PAFAH1B1P43034 410 aa15.56■□□□□ 0.08
TRIM56-201ENST00000306085 RUNDC1Q96C34 613 aa15.55■□□□□ 0.08
TRIM56-201ENST00000306085 MIPOL1Q8TD10 442 aa15.55■□□□□ 0.08
TRIM56-201ENST00000306085 UACAQ9BZF9 1416 aa15.55■□□□□ 0.08
TRIM56-201ENST00000306085 DZIP1Q86YF9 867 aaKnown RBP15.55■□□□□ 0.08
TRIM56-201ENST00000306085 MYCNP04198 464 aaPredicted RBP15.55■□□□□ 0.08
TRIM56-201ENST00000306085 RAPGEF4Q8WZA2 1011 aa15.55■□□□□ 0.08
TRIM56-201ENST00000306085 UBAC1Q9BSL1 405 aa15.55■□□□□ 0.08
TRIM56-201ENST00000306085 FEZ2Q9UHY8 353 aaPredicted RBP15.55■□□□□ 0.08
TRIM56-201ENST00000306085 FAM184BQ9ULE4 1060 aa15.55■□□□□ 0.08
TRIM56-201ENST00000306085 CCDC144AA2RUR9 1427 aa15.55■□□□□ 0.08
TRIM56-201ENST00000306085 FMN1Q68DA7 1419 aa15.55■□□□□ 0.08
TRIM56-201ENST00000306085 LIG1P18858 919 aa15.55■□□□□ 0.08
TRIM56-201ENST00000306085 TDO2P48775 406 aa15.54■□□□□ 0.08
TRIM56-201ENST00000306085 SPINK5Q9NQ38 1064 aaPredicted RBP15.54■□□□□ 0.08
TRIM56-201ENST00000306085 ANKS4BQ8N8V4 417 aa15.54■□□□□ 0.08
TRIM56-201ENST00000306085 CEP57Q86XR8 500 aa15.54■□□□□ 0.08
TRIM56-201ENST00000306085 NAA15Q9BXJ9 866 aaKnown RBP15.54■□□□□ 0.08
TRIM56-201ENST00000306085 TDRD12Q587J7 1177 aaKnown RBP15.54■□□□□ 0.08
TRIM56-201ENST00000306085 CWC25Q9NXE8 425 aaPredicted RBP15.54■□□□□ 0.08
TRIM56-201ENST00000306085 TOP1P11387 765 aaKnown RBP15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms