RNA–Protein interactions for RNA: ENST00000306006.10

ZNF239-201, Transcript of zinc finger protein 239, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF239, Length 2,389 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF239-201ENST00000306006 KIF16BQ96L93 1317 aa12.15□□□□□ -0.46
ZNF239-201ENST00000306006 IGHDP01880 384 aa12.15□□□□□ -0.46
ZNF239-201ENST00000306006 MS4A1P11836 297 aa12.15□□□□□ -0.46
ZNF239-201ENST00000306006 BRPF1P55201 1214 aaPredicted RBP12.15□□□□□ -0.46
ZNF239-201ENST00000306006 MSH6P52701 1360 aa12.15□□□□□ -0.47
ZNF239-201ENST00000306006 TCERG1O14776 1098 aaKnown RBP12.14□□□□□ -0.47
ZNF239-201ENST00000306006 NBPF6Q5VWK0 638 aa12.14□□□□□ -0.47
ZNF239-201ENST00000306006 NBPF4Q96M43 638 aa12.14□□□□□ -0.47
ZNF239-201ENST00000306006 ALS2Q96Q42 1657 aa12.14□□□□□ -0.47
ZNF239-201ENST00000306006 AAMPQ13685 434 aa12.14□□□□□ -0.47
ZNF239-201ENST00000306006 MRPL50Q8N5N7 158 aaKnown RBP12.14□□□□□ -0.47
ZNF239-201ENST00000306006 RTF1Q92541 710 aaKnown RBP12.14□□□□□ -0.47
ZNF239-201ENST00000306006 IPO8O15397 1037 aaKnown RBP12.13□□□□□ -0.47
ZNF239-201ENST00000306006 PCDHB15Q9Y5E8 787 aa12.13□□□□□ -0.47
ZNF239-201ENST00000306006 ZNF335Q9H4Z2 1342 aaPredicted RBP12.12□□□□□ -0.47
ZNF239-201ENST00000306006 KRT24Q2M2I5 525 aa12.12□□□□□ -0.47
ZNF239-201ENST00000306006 LRRC59Q96AG4 307 aaKnown RBP12.12□□□□□ -0.47
ZNF239-201ENST00000306006 MIS18AQ9NYP9 233 aa12.12□□□□□ -0.47
ZNF239-201ENST00000306006 MED1Q15648 1581 aaPredicted RBP12.12□□□□□ -0.47
ZNF239-201ENST00000306006 RGPD2P0DJD1 1756 aa12.12□□□□□ -0.47
ZNF239-201ENST00000306006 GNAT3A8MTJ3 354 aa12.12□□□□□ -0.47
ZNF239-201ENST00000306006 HTATSF1O43719 755 aaKnown RBP12.12□□□□□ -0.47
ZNF239-201ENST00000306006 TMEM57Q8N5G2 664 aa12.12□□□□□ -0.47
ZNF239-201ENST00000306006 NPHP3Q7Z494 1330 aa12.11□□□□□ -0.47
ZNF239-201ENST00000306006 ITPRIPQ8IWB1 547 aa12.11□□□□□ -0.47
ZNF239-201ENST00000306006 AXIN2Q9Y2T1 843 aa12.11□□□□□ -0.47
ZNF239-201ENST00000306006 ERICH6Q7L0X2 663 aa12.11□□□□□ -0.47
ZNF239-201ENST00000306006 KIAA0232Q92628 1395 aa12.1□□□□□ -0.47
ZNF239-201ENST00000306006 MAP3K5Q99683 1374 aa12.1□□□□□ -0.47
ZNF239-201ENST00000306006 ZC3H6P61129 1189 aaKnown RBP12.1□□□□□ -0.47
ZNF239-201ENST00000306006 ANKRD24Q8TF21 1146 aa12.1□□□□□ -0.47
ZNF239-201ENST00000306006 DDX19BQ9UMR2 479 aa12.1□□□□□ -0.47
ZNF239-201ENST00000306006 IL17REQ8NFR9 667 aa12.1□□□□□ -0.47
ZNF239-201ENST00000306006 ARHGAP45Q92619 1136 aa12.1□□□□□ -0.47
ZNF239-201ENST00000306006 PXDNQ92626 1479 aa12.09□□□□□ -0.47
ZNF239-201ENST00000306006 LRRC37A3O60309 1634 aa12.09□□□□□ -0.47
ZNF239-201ENST00000306006 TSPYL4Q9UJ04 414 aa12.09□□□□□ -0.47
ZNF239-201ENST00000306006 TNS3Q68CZ2 1445 aa12.09□□□□□ -0.47
ZNF239-201ENST00000306006 BRINP3Q76B58 766 aa12.08□□□□□ -0.47
ZNF239-201ENST00000306006 CABLES1Q8TDN4 633 aa12.08□□□□□ -0.48
ZNF239-201ENST00000306006 RGPD5Q99666 1765 aa12.08□□□□□ -0.48
ZNF239-201ENST00000306006 NCAPD2Q15021 1401 aa12.08□□□□□ -0.48
ZNF239-201ENST00000306006 SPATA31A3Q5VYP0 1347 aa12.07□□□□□ -0.48
ZNF239-201ENST00000306006 PDE4AP27815 886 aa12.07□□□□□ -0.48
ZNF239-201ENST00000306006 ZBTB40Q9NUA8 1239 aa12.07□□□□□ -0.48
ZNF239-201ENST00000306006 HAP1P54257 671 aaPredicted RBP12.06□□□□□ -0.48
ZNF239-201ENST00000306006 RWDD1Q9H446 243 aaPredicted RBP12.06□□□□□ -0.48
ZNF239-201ENST00000306006 SLAIN2Q9P270 581 aa12.06□□□□□ -0.48
ZNF239-201ENST00000306006 RGS3P49796 1198 aa12.06□□□□□ -0.48
ZNF239-201ENST00000306006 ABCC4O15439 1325 aa12.06□□□□□ -0.48
ZNF239-201ENST00000306006 ERBB3P21860 1342 aa12.06□□□□□ -0.48
ZNF239-201ENST00000306006 CAMTA1Q9Y6Y1 1673 aa12.05□□□□□ -0.48
ZNF239-201ENST00000306006 BACH2Q9BYV9 841 aa12.05□□□□□ -0.48
ZNF239-201ENST00000306006 TAF7Q15545 349 aaPredicted RBP12.05□□□□□ -0.48
ZNF239-201ENST00000306006 PLEKHO1Q53GL0 409 aaPredicted RBP12.05□□□□□ -0.48
ZNF239-201ENST00000306006 CEMIPQ8WUJ3 1361 aa12.05□□□□□ -0.48
ZNF239-201ENST00000306006 API5Q9BZZ5 524 aaKnown RBP12.05□□□□□ -0.48
ZNF239-201ENST00000306006 CRYBG1Q9Y4K1 1723 aa12.04□□□□□ -0.48
ZNF239-201ENST00000306006 ZBTB7BO15156 539 aaPredicted RBP12.04□□□□□ -0.48
ZNF239-201ENST00000306006 ZNF530Q6P9A1 599 aaPredicted RBP12.04□□□□□ -0.48
ZNF239-201ENST00000306006 LGR6Q9HBX8 967 aa12.04□□□□□ -0.48
ZNF239-201ENST00000306006 COL18A1P39060 1754 aa12.04□□□□□ -0.48
ZNF239-201ENST00000306006 AMOTQ4VCS5 1084 aa12.04□□□□□ -0.48
ZNF239-201ENST00000306006 AKAP4Q5JQC9 854 aa12.03□□□□□ -0.48
ZNF239-201ENST00000306006 BABAM1Q9NWV8 329 aa12.03□□□□□ -0.48
ZNF239-201ENST00000306006 LMO7Q8WWI1 1683 aa12.03□□□□□ -0.48
ZNF239-201ENST00000306006 SLC4A2P04920 1241 aa12.03□□□□□ -0.48
ZNF239-201ENST00000306006 HDAC1Q13547 482 aaPredicted RBP12.03□□□□□ -0.48
ZNF239-201ENST00000306006 CHRNA2Q15822 529 aa12.03□□□□□ -0.48
ZNF239-201ENST00000306006 RGS12O14924 1447 aa12.02□□□□□ -0.48
ZNF239-201ENST00000306006 SOS2Q07890 1332 aaPredicted RBP12.02□□□□□ -0.49
ZNF239-201ENST00000306006 PDZRN3Q9UPQ7 1066 aa12.02□□□□□ -0.49
ZNF239-201ENST00000306006 MPRIPQ6WCQ1 1025 aa12.01□□□□□ -0.49
ZNF239-201ENST00000306006 NLRP2Q9NX02 1062 aa12.01□□□□□ -0.49
ZNF239-201ENST00000306006 PTPRCP08575 1304 aa12.01□□□□□ -0.49
ZNF239-201ENST00000306006 C1orf141Q5JVX7 400 aa12□□□□□ -0.49
ZNF239-201ENST00000306006 G2E3Q7L622 706 aa12□□□□□ -0.49
ZNF239-201ENST00000306006 CPDO75976 1380 aa12□□□□□ -0.49
ZNF239-201ENST00000306006 INTS3Q68E01 1043 aaKnown RBP12□□□□□ -0.49
ZNF239-201ENST00000306006 CHMP4BQ9H444 224 aaKnown RBP12□□□□□ -0.49
ZNF239-201ENST00000306006 FAM208AQ9UK61 1670 aaKnown RBP11.99□□□□□ -0.49
ZNF239-201ENST00000306006 RNMTO43148 476 aaKnown RBP11.99□□□□□ -0.49
ZNF239-201ENST00000306006 C1orf115Q9H7X2 142 aa11.99□□□□□ -0.49
ZNF239-201ENST00000306006 ABCC6O95255 1503 aa11.99□□□□□ -0.49
ZNF239-201ENST00000306006 CSB-PGBD3P0DP91 1061 aa11.99□□□□□ -0.49
ZNF239-201ENST00000306006 TEFQ10587 303 aa11.99□□□□□ -0.49
ZNF239-201ENST00000306006 FAM161AQ3B820 660 aa11.99□□□□□ -0.49
ZNF239-201ENST00000306006 C8orf34Q49A92 452 aa11.99□□□□□ -0.49
ZNF239-201ENST00000306006 SOS1Q07889 1333 aaPredicted RBP11.98□□□□□ -0.49
ZNF239-201ENST00000306006 MSH5O43196 834 aa11.98□□□□□ -0.49
ZNF239-201ENST00000306006 CCDC30Q5VVM6 783 aa11.98□□□□□ -0.49
ZNF239-201ENST00000306006 SMC5Q8IY18 1101 aa11.98□□□□□ -0.49
ZNF239-201ENST00000306006 RAPGEF4Q8WZA2 1011 aa11.98□□□□□ -0.49
ZNF239-201ENST00000306006 NECTIN2Q92692 538 aa11.98□□□□□ -0.49
ZNF239-201ENST00000306006 STK31Q9BXU1 1019 aa11.98□□□□□ -0.49
ZNF239-201ENST00000306006 KDM3BQ7LBC6 1761 aa11.98□□□□□ -0.49
ZNF239-201ENST00000306006 KCNQ3O43525 872 aa11.98□□□□□ -0.49
ZNF239-201ENST00000306006 EIF4A1P60842 406 aaKnown RBP11.98□□□□□ -0.49
ZNF239-201ENST00000306006 VIRMAQ69YN4 1812 aaKnown RBP11.98□□□□□ -0.49
ZNF239-201ENST00000306006 BTBD11A6QL63 1104 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms