RNA–Protein interactions for RNA: ENST00000305409.2

SCG2-201, Transcript of secretogranin II, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCG2, Length 2,576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG2-201ENST00000305409 GCP02774 474 aa14.46□□□□□ -0.09
SCG2-201ENST00000305409 NOP58Q9Y2X3 529 aaKnown RBP14.46□□□□□ -0.09
SCG2-201ENST00000305409 KDRP35968 1356 aa14.45□□□□□ -0.1
SCG2-201ENST00000305409 IP6K1Q92551 441 aa14.45□□□□□ -0.1
SCG2-201ENST00000305409 C19orf44Q9H6X5 657 aa14.45□□□□□ -0.1
SCG2-201ENST00000305409 ZC3H6P61129 1189 aaKnown RBP14.45□□□□□ -0.1
SCG2-201ENST00000305409 GAS2L2Q8NHY3 880 aa14.45□□□□□ -0.1
SCG2-201ENST00000305409 CRB1P82279 1406 aa14.45□□□□□ -0.1
SCG2-201ENST00000305409 IL17REQ8NFR9 667 aa14.44□□□□□ -0.1
SCG2-201ENST00000305409 ZNF428Q96B54 188 aa14.44□□□□□ -0.1
SCG2-201ENST00000305409 TMEM94Q12767 1356 aa14.44□□□□□ -0.1
SCG2-201ENST00000305409 ZBTB7BO15156 539 aaPredicted RBP14.44□□□□□ -0.1
SCG2-201ENST00000305409 SEC24BO95487 1268 aa14.44□□□□□ -0.1
SCG2-201ENST00000305409 RGPD1P0DJD0 1748 aa14.44□□□□□ -0.1
SCG2-201ENST00000305409 GNAT3A8MTJ3 354 aa14.43□□□□□ -0.1
SCG2-201ENST00000305409 ZBTB47Q9UFB7 747 aaPredicted RBP14.43□□□□□ -0.1
SCG2-201ENST00000305409 AXIN2Q9Y2T1 843 aa14.43□□□□□ -0.1
SCG2-201ENST00000305409 ATF3P18847 181 aa14.43□□□□□ -0.1
SCG2-201ENST00000305409 SLC4A3P48751 1232 aa14.43□□□□□ -0.1
SCG2-201ENST00000305409 BRPF1P55201 1214 aaPredicted RBP14.43□□□□□ -0.1
SCG2-201ENST00000305409 AAMPQ13685 434 aa14.43□□□□□ -0.1
SCG2-201ENST00000305409 MARF1Q9Y4F3 1742 aaKnown RBP14.43□□□□□ -0.1
SCG2-201ENST00000305409 SLC4A2P04920 1241 aa14.42□□□□□ -0.1
SCG2-201ENST00000305409 CABLES1Q8TDN4 633 aa14.42□□□□□ -0.1
SCG2-201ENST00000305409 G2E3Q7L622 706 aa14.42□□□□□ -0.1
SCG2-201ENST00000305409 KCNH5Q8NCM2 988 aa14.41□□□□□ -0.1
SCG2-201ENST00000305409 LGR6Q9HBX8 967 aa14.41□□□□□ -0.1
SCG2-201ENST00000305409 F6X3S4 739 aa14.4□□□□□ -0.1
SCG2-201ENST00000305409 ARHGAP45Q92619 1136 aa14.4□□□□□ -0.1
SCG2-201ENST00000305409 C1orf167Q5SNV9 1468 aa14.4□□□□□ -0.1
SCG2-201ENST00000305409 NWD1Q149M9 1564 aa14.4□□□□□ -0.1
SCG2-201ENST00000305409 HDAC1Q13547 482 aaPredicted RBP14.4□□□□□ -0.1
SCG2-201ENST00000305409 ARHGEF25Q86VW2 580 aa14.4□□□□□ -0.1
SCG2-201ENST00000305409 LNPKQ9C0E8 428 aa14.4□□□□□ -0.1
SCG2-201ENST00000305409 ABCC4O15439 1325 aa14.4□□□□□ -0.1
SCG2-201ENST00000305409 API5Q9BZZ5 524 aaKnown RBP14.39□□□□□ -0.11
SCG2-201ENST00000305409 SLC4A10Q6U841 1118 aa14.39□□□□□ -0.11
SCG2-201ENST00000305409 SIRT2Q8IXJ6 389 aa14.39□□□□□ -0.11
SCG2-201ENST00000305409 ANKRD24Q8TF21 1146 aa14.39□□□□□ -0.11
SCG2-201ENST00000305409 MSH6P52701 1360 aa14.38□□□□□ -0.11
SCG2-201ENST00000305409 MPRIPQ6WCQ1 1025 aa14.38□□□□□ -0.11
SCG2-201ENST00000305409 NFAT5O94916 1531 aa14.38□□□□□ -0.11
SCG2-201ENST00000305409 MAP3K5Q99683 1374 aa14.37□□□□□ -0.11
SCG2-201ENST00000305409 KCNQ3O43525 872 aa14.37□□□□□ -0.11
SCG2-201ENST00000305409 NBR1Q14596 966 aa14.37□□□□□ -0.11
SCG2-201ENST00000305409 KIF24Q5T7B8 1368 aa14.37□□□□□ -0.11
SCG2-201ENST00000305409 KDM4FA0A1W2PPD8 638 aa14.36□□□□□ -0.11
SCG2-201ENST00000305409 CHRNA2Q15822 529 aa14.36□□□□□ -0.11
SCG2-201ENST00000305409 ANKRD45Q5TZF3 282 aa14.36□□□□□ -0.11
SCG2-201ENST00000305409 SMC5Q8IY18 1101 aa14.36□□□□□ -0.11
SCG2-201ENST00000305409 TAF7Q15545 349 aaPredicted RBP14.36□□□□□ -0.11
SCG2-201ENST00000305409 ZNF530Q6P9A1 599 aaPredicted RBP14.36□□□□□ -0.11
SCG2-201ENST00000305409 RTL1A6NKG5 1358 aa14.36□□□□□ -0.11
SCG2-201ENST00000305409 KIAA0232Q92628 1395 aa14.36□□□□□ -0.11
SCG2-201ENST00000305409 LTN1O94822 1766 aa14.35□□□□□ -0.11
SCG2-201ENST00000305409 MEIS3Q99687 375 aa14.35□□□□□ -0.11
SCG2-201ENST00000305409 EIF2S2P20042 333 aaKnown RBP14.34□□□□□ -0.11
SCG2-201ENST00000305409 APBB1O00213 710 aa14.34□□□□□ -0.11
SCG2-201ENST00000305409 RGS12O14924 1447 aa14.34□□□□□ -0.11
SCG2-201ENST00000305409 HTATSF1O43719 755 aaKnown RBP14.33□□□□□ -0.11
SCG2-201ENST00000305409 MST1RQ04912 1400 aa14.33□□□□□ -0.12
SCG2-201ENST00000305409 NUCB1Q02818 461 aa14.33□□□□□ -0.12
SCG2-201ENST00000305409 NLRP2Q9NX02 1062 aa14.33□□□□□ -0.12
SCG2-201ENST00000305409 USP19O94966 1318 aa14.33□□□□□ -0.12
SCG2-201ENST00000305409 INTS3Q68E01 1043 aaKnown RBP14.32□□□□□ -0.12
SCG2-201ENST00000305409 CHD1LQ86WJ1 897 aa14.32□□□□□ -0.12
SCG2-201ENST00000305409 STK31Q9BXU1 1019 aa14.32□□□□□ -0.12
SCG2-201ENST00000305409 STRCP1A6NGW2 1772 aa14.32□□□□□ -0.12
SCG2-201ENST00000305409 ANXA1P04083 346 aa14.32□□□□□ -0.12
SCG2-201ENST00000305409 FKBP5Q13451 457 aaPredicted RBP14.32□□□□□ -0.12
SCG2-201ENST00000305409 ZNF335Q9H4Z2 1342 aaPredicted RBP14.32□□□□□ -0.12
SCG2-201ENST00000305409 RGPD2P0DJD1 1756 aa14.32□□□□□ -0.12
SCG2-201ENST00000305409 HAP1P54257 671 aaPredicted RBP14.31□□□□□ -0.12
SCG2-201ENST00000305409 CADPS2Q86UW7 1296 aa14.31□□□□□ -0.12
SCG2-201ENST00000305409 PLEKHO1Q53GL0 409 aaPredicted RBP14.31□□□□□ -0.12
SCG2-201ENST00000305409 PHAXQ9H814 394 aaKnown RBP14.31□□□□□ -0.12
SCG2-201ENST00000305409 FLIIQ13045 1269 aa14.3□□□□□ -0.12
SCG2-201ENST00000305409 CSB-PGBD3P0DP91 1061 aa14.3□□□□□ -0.12
SCG2-201ENST00000305409 TEFQ10587 303 aa14.3□□□□□ -0.12
SCG2-201ENST00000305409 PTPRCP08575 1304 aa14.3□□□□□ -0.12
SCG2-201ENST00000305409 HDGFL1Q5TGJ6 251 aa14.29□□□□□ -0.12
SCG2-201ENST00000305409 CCDC30Q5VVM6 783 aa14.29□□□□□ -0.12
SCG2-201ENST00000305409 PXDNQ92626 1479 aa14.29□□□□□ -0.12
SCG2-201ENST00000305409 BTBD11A6QL63 1104 aa14.29□□□□□ -0.12
SCG2-201ENST00000305409 C1orf141Q5JVX7 400 aa14.29□□□□□ -0.12
SCG2-201ENST00000305409 C16orf71Q8IYS4 520 aaPredicted RBP14.29□□□□□ -0.12
SCG2-201ENST00000305409 PRAMEF22A3QJZ6 481 aa14.29□□□□□ -0.12
SCG2-201ENST00000305409 MFAP1P55081 439 aaKnown RBP14.29□□□□□ -0.12
SCG2-201ENST00000305409 AKAP4Q5JQC9 854 aa14.29□□□□□ -0.12
SCG2-201ENST00000305409 CHMP4BQ9H444 224 aaKnown RBP14.29□□□□□ -0.12
SCG2-201ENST00000305409 USP54Q70EL1 1684 aa14.28□□□□□ -0.12
SCG2-201ENST00000305409 ERBB3P21860 1342 aa14.28□□□□□ -0.12
SCG2-201ENST00000305409 RNMTO43148 476 aaKnown RBP14.28□□□□□ -0.12
SCG2-201ENST00000305409 SMARCA5O60264 1052 aaPredicted RBP14.28□□□□□ -0.12
SCG2-201ENST00000305409 EIF4A1P60842 406 aaKnown RBP14.28□□□□□ -0.12
SCG2-201ENST00000305409 CEP85Q6P2H3 762 aa14.28□□□□□ -0.12
SCG2-201ENST00000305409 BRINP3Q76B58 766 aa14.28□□□□□ -0.12
SCG2-201ENST00000305409 NPHP3Q7Z494 1330 aa14.27□□□□□ -0.12
SCG2-201ENST00000305409 CEMIPQ8WUJ3 1361 aa14.27□□□□□ -0.13
SCG2-201ENST00000305409 GCC1Q96CN9 775 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms