RNA–Protein interactions for RNA: ENST00000304743.6

PCNX1-201, Transcript of pecanex 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCNX1, Length 12,919 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-201ENST00000304743 KIF7Q2M1P5 1343 aa9.42□□□□□ -0.9
PCNX1-201ENST00000304743 NUTM2DQ5VT03 806 aaPredicted RBP9.42□□□□□ -0.9
PCNX1-201ENST00000304743 PSPC1Q8WXF1 523 aaKnown RBP9.42□□□□□ -0.9
PCNX1-201ENST00000304743 FAM184BQ9ULE4 1060 aa9.42□□□□□ -0.9
PCNX1-201ENST00000304743 NINLQ9Y2I6 1382 aa9.42□□□□□ -0.9
PCNX1-201ENST00000304743 LETM1O95202 739 aaPredicted RBP9.41□□□□□ -0.9
PCNX1-201ENST00000304743 SPECC1Q5M775 1068 aa9.41□□□□□ -0.9
PCNX1-201ENST00000304743 CCDC160A6NGH7 325 aa9.41□□□□□ -0.9
PCNX1-201ENST00000304743 TTC39AQ5SRH9 613 aa9.41□□□□□ -0.9
PCNX1-201ENST00000304743 GAS8O95995 478 aa9.41□□□□□ -0.9
PCNX1-201ENST00000304743 SIRT1Q96EB6 747 aa9.41□□□□□ -0.9
PCNX1-201ENST00000304743 FAM114A2Q9NRY5 505 aa9.41□□□□□ -0.9
PCNX1-201ENST00000304743 ZBTB16Q05516 673 aa9.41□□□□□ -0.9
PCNX1-201ENST00000304743 MIPOL1Q8TD10 442 aa9.41□□□□□ -0.9
PCNX1-201ENST00000304743 ZNF396Q96N95 335 aaPredicted RBP9.41□□□□□ -0.9
PCNX1-201ENST00000304743 AEBP1Q8IUX7 1158 aa9.41□□□□□ -0.9
PCNX1-201ENST00000304743 NUP133Q8WUM0 1156 aa9.41□□□□□ -0.9
PCNX1-201ENST00000304743 GSDMBQ8TAX9 411 aa9.41□□□□□ -0.9
PCNX1-201ENST00000304743 MAP4K4O95819 1239 aaPredicted RBP9.4□□□□□ -0.9
PCNX1-201ENST00000304743 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.4□□□□□ -0.9
PCNX1-201ENST00000304743 CCDC172P0C7W6 258 aa9.4□□□□□ -0.9
PCNX1-201ENST00000304743 KCNA4P22459 653 aa9.4□□□□□ -0.9
PCNX1-201ENST00000304743 CCT6BQ92526 530 aa9.4□□□□□ -0.9
PCNX1-201ENST00000304743 PUF60Q9UHX1 559 aaKnown RBP9.4□□□□□ -0.9
PCNX1-201ENST00000304743 SAMM50Q9Y512 469 aa9.4□□□□□ -0.9
PCNX1-201ENST00000304743 IQCGQ9H095 443 aaKnown RBP9.4□□□□□ -0.9
PCNX1-201ENST00000304743 UBA5Q9GZZ9 404 aa9.4□□□□□ -0.91
PCNX1-201ENST00000304743 ZNF526Q8TF50 670 aaPredicted RBP9.4□□□□□ -0.91
PCNX1-201ENST00000304743 MYO1BO43795 1136 aa9.4□□□□□ -0.91
PCNX1-201ENST00000304743 CNGA1P29973 690 aa9.39□□□□□ -0.91
PCNX1-201ENST00000304743 TTC21AQ8NDW8 1320 aa9.39□□□□□ -0.91
PCNX1-201ENST00000304743 CNTROBQ8N137 903 aa9.39□□□□□ -0.91
PCNX1-201ENST00000304743 EPSTI1Q96J88 318 aa9.39□□□□□ -0.91
PCNX1-201ENST00000304743 GEN1Q17RS7 908 aa9.39□□□□□ -0.91
PCNX1-201ENST00000304743 CACNA2D4Q7Z3S7 1137 aa9.39□□□□□ -0.91
PCNX1-201ENST00000304743 RAB3IPQ96QF0 476 aaPredicted RBP9.39□□□□□ -0.91
PCNX1-201ENST00000304743 SPC25Q9HBM1 224 aa9.39□□□□□ -0.91
PCNX1-201ENST00000304743 MXRA7P84157 204 aa9.39□□□□□ -0.91
PCNX1-201ENST00000304743 FLIIQ13045 1269 aa9.39□□□□□ -0.91
PCNX1-201ENST00000304743 RAB34Q9BZG1 259 aa9.39□□□□□ -0.91
PCNX1-201ENST00000304743 KIAA1524Q8TCG1 905 aa9.39□□□□□ -0.91
PCNX1-201ENST00000304743 INTS3Q68E01 1043 aaKnown RBP9.39□□□□□ -0.91
PCNX1-201ENST00000304743 FAM114A1Q8IWE2 563 aa9.39□□□□□ -0.91
PCNX1-201ENST00000304743 FSD1Q9BTV5 496 aa9.39□□□□□ -0.91
PCNX1-201ENST00000304743 ZSCAN25Q6NSZ9 544 aa9.39□□□□□ -0.91
PCNX1-201ENST00000304743 DDX12PQ92771 950 aa9.39□□□□□ -0.91
PCNX1-201ENST00000304743 TRMT1LQ7Z2T5 733 aaKnown RBP9.38□□□□□ -0.91
PCNX1-201ENST00000304743 FAM177A1Q8N128 213 aaPredicted RBP9.38□□□□□ -0.91
PCNX1-201ENST00000304743 CLIP1P30622 1438 aa9.38□□□□□ -0.91
PCNX1-201ENST00000304743 TXNDC16Q9P2K2 825 aa9.38□□□□□ -0.91
PCNX1-201ENST00000304743 LUZP1Q86V48 1076 aa9.38□□□□□ -0.91
PCNX1-201ENST00000304743 CRACR2AQ9BSW2 395 aa9.38□□□□□ -0.91
PCNX1-201ENST00000304743 STK38Q15208 465 aa9.38□□□□□ -0.91
PCNX1-201ENST00000304743 CCDC144CPQ8IYA2 1237 aa9.38□□□□□ -0.91
PCNX1-201ENST00000304743 CCDC102AQ96A19 550 aa9.38□□□□□ -0.91
PCNX1-201ENST00000304743 UBAC1Q9BSL1 405 aa9.38□□□□□ -0.91
PCNX1-201ENST00000304743 MRE11P49959 708 aa9.38□□□□□ -0.91
PCNX1-201ENST00000304743 CCDC129Q6ZRS4 1044 aa9.38□□□□□ -0.91
PCNX1-201ENST00000304743 PPME1Q9Y570 386 aa9.38□□□□□ -0.91
PCNX1-201ENST00000304743 KIF20AO95235 890 aa9.38□□□□□ -0.91
PCNX1-201ENST00000304743 ATF7IPQ6VMQ6 1270 aa9.38□□□□□ -0.91
PCNX1-201ENST00000304743 CCDC148Q8NFR7 591 aa9.38□□□□□ -0.91
PCNX1-201ENST00000304743 TSG101Q99816 390 aa9.38□□□□□ -0.91
PCNX1-201ENST00000304743 RRP7AQ9Y3A4 280 aaKnown RBP9.38□□□□□ -0.91
PCNX1-201ENST00000304743 MRVI1Q9Y6F6 885 aa9.38□□□□□ -0.91
PCNX1-201ENST00000304743 SPA17Q15506 151 aa9.38□□□□□ -0.91
PCNX1-201ENST00000304743 MTERF4Q7Z6M4 381 aaKnown RBP9.38□□□□□ -0.91
PCNX1-201ENST00000304743 PDCP20941 246 aa9.37□□□□□ -0.91
PCNX1-201ENST00000304743 CCDC174Q6PII3 467 aa9.37□□□□□ -0.91
PCNX1-201ENST00000304743 HIP1O00291 1037 aa9.37□□□□□ -0.91
PCNX1-201ENST00000304743 GIPC1O14908 333 aa9.37□□□□□ -0.91
PCNX1-201ENST00000304743 STXBP4Q6ZWJ1 553 aa9.37□□□□□ -0.91
PCNX1-201ENST00000304743 TTC12Q9H892 705 aaPredicted RBP9.37□□□□□ -0.91
PCNX1-201ENST00000304743 MGEA5O60502 916 aa9.37□□□□□ -0.91
PCNX1-201ENST00000304743 STX6O43752 255 aa9.37□□□□□ -0.91
PCNX1-201ENST00000304743 CCDC96Q2M329 555 aa9.37□□□□□ -0.91
PCNX1-201ENST00000304743 CCDC178Q5BJE1 867 aa9.37□□□□□ -0.91
PCNX1-201ENST00000304743 CKAP2LQ8IYA6 745 aa9.37□□□□□ -0.91
PCNX1-201ENST00000304743 ACRBPQ8NEB7 543 aa9.37□□□□□ -0.91
PCNX1-201ENST00000304743 ATP2B3Q16720 1220 aa9.36□□□□□ -0.91
PCNX1-201ENST00000304743 SPECC1LQ69YQ0 1117 aa9.36□□□□□ -0.91
PCNX1-201ENST00000304743 FGFR1OPO95684 399 aaKnown RBP9.36□□□□□ -0.91
PCNX1-201ENST00000304743 ATRIPQ8WXE1 791 aa9.36□□□□□ -0.91
PCNX1-201ENST00000304743 SMC6Q96SB8 1091 aa9.36□□□□□ -0.91
PCNX1-201ENST00000304743 WDR46O15213 610 aaKnown RBP9.36□□□□□ -0.91
PCNX1-201ENST00000304743 NOD1Q9Y239 953 aa9.36□□□□□ -0.91
PCNX1-201ENST00000304743 ROCK2O75116 1388 aaKnown RBP9.36□□□□□ -0.91
PCNX1-201ENST00000304743 ATP2C2O75185 946 aa9.36□□□□□ -0.91
PCNX1-201ENST00000304743 DACT3Q96B18 629 aaPredicted RBP9.36□□□□□ -0.91
PCNX1-201ENST00000304743 A0A1W2PRG0 241 aa9.36□□□□□ -0.91
PCNX1-201ENST00000304743 PRPF40AO75400 957 aaKnown RBP9.36□□□□□ -0.91
PCNX1-201ENST00000304743 PPFIBP2Q8ND30 876 aa9.36□□□□□ -0.91
PCNX1-201ENST00000304743 TACC3Q9Y6A5 838 aa9.36□□□□□ -0.91
PCNX1-201ENST00000304743 CCDC63Q8NA47 563 aa9.36□□□□□ -0.91
PCNX1-201ENST00000304743 WHAMMQ8TF30 809 aa9.36□□□□□ -0.91
PCNX1-201ENST00000304743 BICD1Q96G01 975 aa9.36□□□□□ -0.91
PCNX1-201ENST00000304743 HMGB3O15347 200 aaKnown RBP9.36□□□□□ -0.91
PCNX1-201ENST00000304743 CBFA2T2O43439 604 aa9.36□□□□□ -0.91
PCNX1-201ENST00000304743 MKNK2Q9HBH9 465 aa9.36□□□□□ -0.91
PCNX1-201ENST00000304743 CCNB3Q8WWL7 1395 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms