RNA–Protein interactions for RNA: ENST00000303757.12

LST1-202, leukocyte specific transcript 1, humanhuman

TSL 1 (best) BASIC

Gene LST1, Length 604 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LST1-202ENST00000303757 NHSQ6T4R5 1651 aa22.69■■□□□ 1.22
LST1-202ENST00000303757 TTC21BQ7Z4L5 1316 aa22.68■■□□□ 1.22
LST1-202ENST00000303757 C1QTNF8P60827 252 aa22.68■■□□□ 1.22
LST1-202ENST00000303757 ARXQ96QS3 562 aa22.68■■□□□ 1.22
LST1-202ENST00000303757 NUBP1P53384 320 aa22.67■■□□□ 1.22
LST1-202ENST00000303757 BTAF1O14981 1849 aa22.66■■□□□ 1.22
LST1-202ENST00000303757 KLHL34Q8N239 644 aa22.66■■□□□ 1.22
LST1-202ENST00000303757 TNS2Q63HR2 1409 aa22.65■■□□□ 1.22
LST1-202ENST00000303757 RASEFQ8IZ41 740 aa22.65■■□□□ 1.22
LST1-202ENST00000303757 KCNH5Q8NCM2 988 aa22.65■■□□□ 1.22
LST1-202ENST00000303757 PAPPAQ13219 1627 aa22.64■■□□□ 1.22
LST1-202ENST00000303757 TRPM1Q7Z4N2 1603 aa22.64■■□□□ 1.22
LST1-202ENST00000303757 CCDC7Q96M83 1385 aa22.63■■□□□ 1.21
LST1-202ENST00000303757 NFAT5O94916 1531 aa22.63■■□□□ 1.21
LST1-202ENST00000303757 GPR162Q16538 588 aa22.63■■□□□ 1.21
LST1-202ENST00000303757 ZNF827Q17R98 1081 aa22.63■■□□□ 1.21
LST1-202ENST00000303757 EVC2Q86UK5 1308 aa22.62■■□□□ 1.21
LST1-202ENST00000303757 PELP1Q8IZL8 1130 aaKnown RBP22.62■■□□□ 1.21
LST1-202ENST00000303757 UTRNP46939 3433 aa22.61■■□□□ 1.21
LST1-202ENST00000303757 NLRP2Q9NX02 1062 aa22.6■■□□□ 1.21
LST1-202ENST00000303757 LTN1O94822 1766 aa22.59■■□□□ 1.21
LST1-202ENST00000303757 ABCC6O95255 1503 aa22.59■■□□□ 1.21
LST1-202ENST00000303757 LRRC4BQ9NT99 713 aa22.59■■□□□ 1.21
LST1-202ENST00000303757 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.58■■□□□ 1.21
LST1-202ENST00000303757 TTC21AQ8NDW8 1320 aa22.57■■□□□ 1.2
LST1-202ENST00000303757 ZNF579Q8NAF0 562 aaKnown RBP22.57■■□□□ 1.2
LST1-202ENST00000303757 KTN1Q86UP2 1357 aaKnown RBP22.57■■□□□ 1.2
LST1-202ENST00000303757 TSPYL2Q9H2G4 693 aaPredicted RBP22.56■■□□□ 1.2
LST1-202ENST00000303757 TUBGCP6Q96RT7 1819 aa22.55■■□□□ 1.2
LST1-202ENST00000303757 MAP3K5Q99683 1374 aa22.55■■□□□ 1.2
LST1-202ENST00000303757 IL2RBP14784 551 aa22.55■■□□□ 1.2
LST1-202ENST00000303757 MON2Q7Z3U7 1717 aa22.54■■□□□ 1.2
LST1-202ENST00000303757 GIGYF1O75420 1035 aaPredicted RBP22.54■■□□□ 1.2
LST1-202ENST00000303757 KCNQ4P56696 695 aa22.54■■□□□ 1.2
LST1-202ENST00000303757 ERBB3P21860 1342 aa22.54■■□□□ 1.2
LST1-202ENST00000303757 NME9Q86XW9 330 aa22.52■■□□□ 1.2
LST1-202ENST00000303757 NLGN2Q8NFZ4 835 aa22.51■■□□□ 1.19
LST1-202ENST00000303757 ANKRD24Q8TF21 1146 aa22.51■■□□□ 1.19
LST1-202ENST00000303757 L3MBTL2Q969R5 705 aa22.51■■□□□ 1.19
LST1-202ENST00000303757 QSER1Q2KHR3 1735 aa22.51■■□□□ 1.19
LST1-202ENST00000303757 POLD1P28340 1107 aa22.5■■□□□ 1.19
LST1-202ENST00000303757 PNPLA7Q6ZV29 1317 aa22.5■■□□□ 1.19
LST1-202ENST00000303757 SHANK3Q9BYB0 1731 aa22.49■■□□□ 1.19
LST1-202ENST00000303757 DDX54Q8TDD1 881 aaKnown RBP22.49■■□□□ 1.19
LST1-202ENST00000303757 COL24A1Q17RW2 1714 aa22.48■■□□□ 1.19
LST1-202ENST00000303757 SYTL4Q96C24 671 aaPredicted RBP22.47■■□□□ 1.19
LST1-202ENST00000303757 TFCP2L1Q9NZI6 479 aa22.47■■□□□ 1.19
LST1-202ENST00000303757 ROCK2O75116 1388 aaKnown RBP22.47■■□□□ 1.19
LST1-202ENST00000303757 IFFO2Q5TF58 517 aa22.46■■□□□ 1.19
LST1-202ENST00000303757 SLC16A10Q8TF71 515 aa22.46■■□□□ 1.19
LST1-202ENST00000303757 SPOCK2Q92563 424 aa22.46■■□□□ 1.19
LST1-202ENST00000303757 LTV1Q96GA3 475 aaPredicted RBP22.46■■□□□ 1.19
LST1-202ENST00000303757 USP54Q70EL1 1684 aa22.46■■□□□ 1.19
LST1-202ENST00000303757 PHF12Q96QT6 1004 aa22.45■■□□□ 1.18
LST1-202ENST00000303757 USP31Q70CQ4 1352 aa22.45■■□□□ 1.18
LST1-202ENST00000303757 DOT1LQ8TEK3 1739 aa22.45■■□□□ 1.18
LST1-202ENST00000303757 GABBR2O75899 941 aa22.43■■□□□ 1.18
LST1-202ENST00000303757 YBX3P16989 372 aaKnown RBP eCLIP22.43■■□□□ 1.18
LST1-202ENST00000303757 SLC27A3Q5K4L6 730 aa22.43■■□□□ 1.18
LST1-202ENST00000303757 TMC1Q8TDI8 760 aa22.43■■□□□ 1.18
LST1-202ENST00000303757 FAM212AQ96EL1 285 aa22.43■■□□□ 1.18
LST1-202ENST00000303757 SIN3AQ96ST3 1273 aa22.42■■□□□ 1.18
LST1-202ENST00000303757 CD163L1Q9NR16 1453 aa22.41■■□□□ 1.18
LST1-202ENST00000303757 SBNO2Q9Y2G9 1366 aa22.41■■□□□ 1.18
LST1-202ENST00000303757 RGPD2P0DJD1 1756 aa22.41■■□□□ 1.18
LST1-202ENST00000303757 LY75O60449 1722 aa22.41■■□□□ 1.18
LST1-202ENST00000303757 PRIM1P49642 420 aaKnown RBP22.41■■□□□ 1.18
LST1-202ENST00000303757 MSL1Q68DK7 614 aa22.39■■□□□ 1.17
LST1-202ENST00000303757 NEUROD1Q13562 356 aa22.38■■□□□ 1.17
LST1-202ENST00000303757 SLC12A5Q9H2X9 1139 aa22.38■■□□□ 1.17
LST1-202ENST00000303757 HDGFL2Q7Z4V5 671 aaPredicted RBP22.36■■□□□ 1.17
LST1-202ENST00000303757 COL23A1Q86Y22 540 aaPredicted RBP22.35■■□□□ 1.17
LST1-202ENST00000303757 CCNL1Q9UK58 526 aaPredicted RBP22.35■■□□□ 1.17
LST1-202ENST00000303757 FAM208AQ9UK61 1670 aaKnown RBP22.35■■□□□ 1.17
LST1-202ENST00000303757 NSD2O96028 1365 aa22.35■■□□□ 1.17
LST1-202ENST00000303757 ANKRD36BQ8N2N9 1353 aa22.35■■□□□ 1.17
LST1-202ENST00000303757 ATP10DQ9P241 1426 aa22.34■■□□□ 1.17
LST1-202ENST00000303757 GRIN3BO60391 1043 aa22.34■■□□□ 1.17
LST1-202ENST00000303757 FBLN1P23142 703 aa22.34■■□□□ 1.17
LST1-202ENST00000303757 CLCN6P51797 869 aa22.34■■□□□ 1.17
LST1-202ENST00000303757 IP6K1Q92551 441 aa22.34■■□□□ 1.17
LST1-202ENST00000303757 ZNF526Q8TF50 670 aaPredicted RBP22.32■■□□□ 1.16
LST1-202ENST00000303757 EDC4Q6P2E9 1401 aaKnown RBP22.31■■□□□ 1.16
LST1-202ENST00000303757 A0A1W2PP64 1363 aa22.31■■□□□ 1.16
LST1-202ENST00000303757 DCAF8Q5TAQ9 597 aa22.31■■□□□ 1.16
LST1-202ENST00000303757 ZCRB1Q8TBF4 217 aaKnown RBP22.3■■□□□ 1.16
LST1-202ENST00000303757 WWC3Q9ULE0 1092 aa22.3■■□□□ 1.16
LST1-202ENST00000303757 MEGF6O75095 1541 aa22.29■■□□□ 1.16
LST1-202ENST00000303757 C5P01031 1676 aa22.28■■□□□ 1.16
LST1-202ENST00000303757 USP47Q96K76 1375 aa22.27■■□□□ 1.16
LST1-202ENST00000303757 AMPHP49418 695 aa22.27■■□□□ 1.16
LST1-202ENST00000303757 GPBP1L1Q9HC44 474 aaPredicted RBP22.27■■□□□ 1.16
LST1-202ENST00000303757 TERF2IPQ9NYB0 399 aa22.27■■□□□ 1.16
LST1-202ENST00000303757 MAP3K19Q56UN5 1328 aa22.27■■□□□ 1.16
LST1-202ENST00000303757 HOXC9P31274 260 aa22.26■■□□□ 1.15
LST1-202ENST00000303757 USHBP1Q8N6Y0 703 aa22.26■■□□□ 1.15
LST1-202ENST00000303757 KIF12Q96FN5 646 aa22.26■■□□□ 1.15
LST1-202ENST00000303757 CARD11Q9BXL7 1154 aa22.26■■□□□ 1.15
LST1-202ENST00000303757 GOLGB1Q14789 3259 aaKnown RBP22.26■■□□□ 1.15
LST1-202ENST00000303757 TAF1LQ8IZX4 1826 aa22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms