RNA–Protein interactions for RNA: ENST00000303406.4

HOXC4-201, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,524 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-201ENST00000303406 HDAC1Q13547 482 aaPredicted RBP24.71■■□□□ 1.55
HOXC4-201ENST00000303406 ALS2Q96Q42 1657 aa24.71■■□□□ 1.55
HOXC4-201ENST00000303406 MCM10Q7L590 875 aa24.71■■□□□ 1.55
HOXC4-201ENST00000303406 API5Q9BZZ5 524 aaKnown RBP24.71■■□□□ 1.55
HOXC4-201ENST00000303406 NCAPD2Q15021 1401 aa24.7■■□□□ 1.54
HOXC4-201ENST00000303406 TMEM94Q12767 1356 aa24.7■■□□□ 1.54
HOXC4-201ENST00000303406 ABCC4O15439 1325 aa24.7■■□□□ 1.54
HOXC4-201ENST00000303406 FAM161AQ3B820 660 aa24.7■■□□□ 1.54
HOXC4-201ENST00000303406 ZBTB40Q9NUA8 1239 aa24.7■■□□□ 1.54
HOXC4-201ENST00000303406 BABAM1Q9NWV8 329 aa24.7■■□□□ 1.54
HOXC4-201ENST00000303406 FOXO3O43524 673 aa24.68■■□□□ 1.54
HOXC4-201ENST00000303406 KRT28Q7Z3Y7 464 aa24.68■■□□□ 1.54
HOXC4-201ENST00000303406 SKAP1Q86WV1 359 aa24.68■■□□□ 1.54
HOXC4-201ENST00000303406 CAMTA1Q9Y6Y1 1673 aa24.67■■□□□ 1.54
HOXC4-201ENST00000303406 MAP3K5Q99683 1374 aa24.67■■□□□ 1.54
HOXC4-201ENST00000303406 SOS1Q07889 1333 aaPredicted RBP24.67■■□□□ 1.54
HOXC4-201ENST00000303406 GNAT3A8MTJ3 354 aa24.66■■□□□ 1.54
HOXC4-201ENST00000303406 ATF3P18847 181 aa24.66■■□□□ 1.54
HOXC4-201ENST00000303406 ARHGEF25Q86VW2 580 aa24.66■■□□□ 1.54
HOXC4-201ENST00000303406 MSH6P52701 1360 aa24.66■■□□□ 1.54
HOXC4-201ENST00000303406 MSH5O43196 834 aa24.66■■□□□ 1.54
HOXC4-201ENST00000303406 GCP02774 474 aa24.66■■□□□ 1.54
HOXC4-201ENST00000303406 VIRMAQ69YN4 1812 aaKnown RBP24.65■■□□□ 1.54
HOXC4-201ENST00000303406 ELL2O00472 640 aaPredicted RBP24.63■■□□□ 1.53
HOXC4-201ENST00000303406 RGS3P49796 1198 aa24.63■■□□□ 1.53
HOXC4-201ENST00000303406 CADPS2Q86UW7 1296 aa24.63■■□□□ 1.53
HOXC4-201ENST00000303406 PTPRCP08575 1304 aa24.62■■□□□ 1.53
HOXC4-201ENST00000303406 C8orf34Q49A92 452 aa24.61■■□□□ 1.53
HOXC4-201ENST00000303406 LTV1Q96GA3 475 aaPredicted RBP24.61■■□□□ 1.53
HOXC4-201ENST00000303406 TSPYL4Q9UJ04 414 aa24.61■■□□□ 1.53
HOXC4-201ENST00000303406 LMTK3Q96Q04 1460 aa24.61■■□□□ 1.53
HOXC4-201ENST00000303406 ZBTB7BO15156 539 aaPredicted RBP24.61■■□□□ 1.53
HOXC4-201ENST00000303406 IPO9Q96P70 1041 aaKnown RBP24.61■■□□□ 1.53
HOXC4-201ENST00000303406 PDZRN3Q9UPQ7 1066 aa24.61■■□□□ 1.53
HOXC4-201ENST00000303406 ABCC6O95255 1503 aa24.61■■□□□ 1.53
HOXC4-201ENST00000303406 MED1Q15648 1581 aaPredicted RBP24.6■■□□□ 1.53
HOXC4-201ENST00000303406 LMO7Q8WWI1 1683 aa24.6■■□□□ 1.53
HOXC4-201ENST00000303406 SMC5Q8IY18 1101 aa24.6■■□□□ 1.53
HOXC4-201ENST00000303406 NBPF6Q5VWK0 638 aa24.59■■□□□ 1.53
HOXC4-201ENST00000303406 NBPF4Q96M43 638 aa24.59■■□□□ 1.53
HOXC4-201ENST00000303406 CEMIPQ8WUJ3 1361 aa24.58■■□□□ 1.52
HOXC4-201ENST00000303406 RGS12O14924 1447 aa24.57■■□□□ 1.52
HOXC4-201ENST00000303406 NPHP3Q7Z494 1330 aa24.57■■□□□ 1.52
HOXC4-201ENST00000303406 RGPD2P0DJD1 1756 aa24.57■■□□□ 1.52
HOXC4-201ENST00000303406 STRCQ7RTU9 1775 aa24.57■■□□□ 1.52
HOXC4-201ENST00000303406 XIRP1Q702N8 1843 aaKnown RBP24.57■■□□□ 1.52
HOXC4-201ENST00000303406 INTS3Q68E01 1043 aaKnown RBP24.56■■□□□ 1.52
HOXC4-201ENST00000303406 OVOS2A0A0G2JMS6 1433 aa24.56■■□□□ 1.52
HOXC4-201ENST00000303406 XPCQ01831 940 aaPredicted RBP24.56■■□□□ 1.52
HOXC4-201ENST00000303406 TAF7Q15545 349 aaPredicted RBP24.55■■□□□ 1.52
HOXC4-201ENST00000303406 AMOTQ4VCS5 1084 aa24.55■■□□□ 1.52
HOXC4-201ENST00000303406 IL17REQ8NFR9 667 aa24.55■■□□□ 1.52
HOXC4-201ENST00000303406 PLEKHG2Q9H7P9 1386 aa24.54■■□□□ 1.52
HOXC4-201ENST00000303406 KRT24Q2M2I5 525 aa24.54■■□□□ 1.52
HOXC4-201ENST00000303406 TNS3Q68CZ2 1445 aa24.54■■□□□ 1.52
HOXC4-201ENST00000303406 HSPA2P54652 639 aa24.53■■□□□ 1.52
HOXC4-201ENST00000303406 PLEKHO1Q53GL0 409 aaPredicted RBP24.53■■□□□ 1.52
HOXC4-201ENST00000303406 USHBP1Q8N6Y0 703 aa24.53■■□□□ 1.52
HOXC4-201ENST00000303406 PXDNQ92626 1479 aa24.53■■□□□ 1.52
HOXC4-201ENST00000303406 FAM208AQ9UK61 1670 aaKnown RBP24.53■■□□□ 1.52
HOXC4-201ENST00000303406 CACNA1FO60840 1977 aa24.53■■□□□ 1.52
HOXC4-201ENST00000303406 ANKRD24Q8TF21 1146 aa24.52■■□□□ 1.52
HOXC4-201ENST00000303406 CRYBG1Q9Y4K1 1723 aa24.51■■□□□ 1.51
HOXC4-201ENST00000303406 ANP32EQ9BTT0 268 aa24.51■■□□□ 1.51
HOXC4-201ENST00000303406 AKAP4Q5JQC9 854 aa24.51■■□□□ 1.51
HOXC4-201ENST00000303406 LMOD2Q6P5Q4 547 aa24.51■■□□□ 1.51
HOXC4-201ENST00000303406 NOP58Q9Y2X3 529 aaKnown RBP24.51■■□□□ 1.51
HOXC4-201ENST00000303406 KDM3BQ7LBC6 1761 aa24.5■■□□□ 1.51
HOXC4-201ENST00000303406 KDM4FA0A1W2PPD8 638 aa24.5■■□□□ 1.51
HOXC4-201ENST00000303406 GCC1Q96CN9 775 aa24.5■■□□□ 1.51
HOXC4-201ENST00000303406 COL18A1P39060 1754 aa24.49■■□□□ 1.51
HOXC4-201ENST00000303406 ERICH6Q7L0X2 663 aa24.49■■□□□ 1.51
HOXC4-201ENST00000303406 DDRGK1Q96HY6 314 aa24.49■■□□□ 1.51
HOXC4-201ENST00000303406 MIS18AQ9NYP9 233 aa24.49■■□□□ 1.51
HOXC4-201ENST00000303406 CHMP4AQ9BY43 222 aa24.48■■□□□ 1.51
HOXC4-201ENST00000303406 ZBTB7CA1YPR0 619 aa24.47■■□□□ 1.51
HOXC4-201ENST00000303406 CCDC30Q5VVM6 783 aa24.47■■□□□ 1.51
HOXC4-201ENST00000303406 ADAMTS7Q9UKP4 1686 aa24.47■■□□□ 1.51
HOXC4-201ENST00000303406 ERBB3P21860 1342 aa24.47■■□□□ 1.51
HOXC4-201ENST00000303406 SLC4A2P04920 1241 aa24.46■■□□□ 1.51
HOXC4-201ENST00000303406 HOXB7P09629 217 aa24.46■■□□□ 1.51
HOXC4-201ENST00000303406 NUCB1Q02818 461 aa24.46■■□□□ 1.51
HOXC4-201ENST00000303406 LRRC59Q96AG4 307 aaKnown RBP24.46■■□□□ 1.51
HOXC4-201ENST00000303406 STK31Q9BXU1 1019 aa24.46■■□□□ 1.51
HOXC4-201ENST00000303406 SPATA31A3Q5VYP0 1347 aa24.46■■□□□ 1.51
HOXC4-201ENST00000303406 N4BP2Q86UW6 1770 aaPredicted RBP24.45■■□□□ 1.51
HOXC4-201ENST00000303406 RGPD5Q99666 1765 aa24.45■■□□□ 1.51
HOXC4-201ENST00000303406 NPM2Q86SE8 214 aaKnown RBP24.45■■□□□ 1.5
HOXC4-201ENST00000303406 ZBTB47Q9UFB7 747 aaPredicted RBP24.45■■□□□ 1.5
HOXC4-201ENST00000303406 ZNF530Q6P9A1 599 aaPredicted RBP24.44■■□□□ 1.5
HOXC4-201ENST00000303406 CPDO75976 1380 aa24.44■■□□□ 1.5
HOXC4-201ENST00000303406 CCT4P50991 539 aaKnown RBP24.43■■□□□ 1.5
HOXC4-201ENST00000303406 AXIN2Q9Y2T1 843 aa24.43■■□□□ 1.5
HOXC4-201ENST00000303406 PXDNLA1KZ92 1463 aa24.43■■□□□ 1.5
HOXC4-201ENST00000303406 C1orf141Q5JVX7 400 aa24.4■■□□□ 1.5
HOXC4-201ENST00000303406 RPAP2Q8IXW5 612 aaPredicted RBP24.4■■□□□ 1.5
HOXC4-201ENST00000303406 CHD1LQ86WJ1 897 aa24.4■■□□□ 1.5
HOXC4-201ENST00000303406 SIPA1L3O60292 1781 aaPredicted RBP24.39■■□□□ 1.5
HOXC4-201ENST00000303406 ATP10DQ9P241 1426 aa24.39■■□□□ 1.5
HOXC4-201ENST00000303406 SIRT2Q8IXJ6 389 aa24.39■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms