RNA–Protein interactions for RNA: ENST00000301981.7

LRRC28-201, Transcript of leucine rich repeat containing 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC28, Length 5,971 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-201ENST00000301981 RUFY2Q8WXA3 655 aa9.23□□□□□ -0.93
LRRC28-201ENST00000301981 CLSTN1O94985 981 aa9.23□□□□□ -0.93
LRRC28-201ENST00000301981 RBSNQ9H1K0 784 aa9.23□□□□□ -0.93
LRRC28-201ENST00000301981 TNMDQ9H2S6 317 aa9.23□□□□□ -0.93
LRRC28-201ENST00000301981 PDRG1Q9NUG6 133 aa9.23□□□□□ -0.93
LRRC28-201ENST00000301981 CPLX1O14810 134 aa9.22□□□□□ -0.93
LRRC28-201ENST00000301981 FCHSD2O94868 740 aa9.22□□□□□ -0.93
LRRC28-201ENST00000301981 CCDC30Q5VVM6 783 aa9.22□□□□□ -0.93
LRRC28-201ENST00000301981 CLASRPQ8N2M8 674 aaKnown RBP9.22□□□□□ -0.93
LRRC28-201ENST00000301981 NLRP2Q9NX02 1062 aa9.22□□□□□ -0.93
LRRC28-201ENST00000301981 CFAP43Q8NDM7 1665 aa9.22□□□□□ -0.93
LRRC28-201ENST00000301981 HTATSF1O43719 755 aaKnown RBP9.22□□□□□ -0.93
LRRC28-201ENST00000301981 KIAA0586Q9BVV6 1533 aa9.22□□□□□ -0.93
LRRC28-201ENST00000301981 ADCY5O95622 1261 aa9.22□□□□□ -0.93
LRRC28-201ENST00000301981 PIBF1Q8WXW3 757 aa9.22□□□□□ -0.93
LRRC28-201ENST00000301981 NUDT16Q96DE0 195 aaKnown RBP9.22□□□□□ -0.93
LRRC28-201ENST00000301981 TMX3Q96JJ7 454 aa9.22□□□□□ -0.93
LRRC28-201ENST00000301981 HSP90AA4PQ58FG1 418 aa9.22□□□□□ -0.93
LRRC28-201ENST00000301981 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.22□□□□□ -0.93
LRRC28-201ENST00000301981 HSP90AB2PQ58FF8 381 aa9.21□□□□□ -0.93
LRRC28-201ENST00000301981 MBD3O95983 291 aa9.21□□□□□ -0.93
LRRC28-201ENST00000301981 TTC22Q5TAA0 569 aa9.21□□□□□ -0.93
LRRC28-201ENST00000301981 NFXL1Q6ZNB6 911 aa9.21□□□□□ -0.93
LRRC28-201ENST00000301981 NUTM2BA6NNL0 878 aaPredicted RBP9.21□□□□□ -0.94
LRRC28-201ENST00000301981 NUTM2EB1AL46 878 aaPredicted RBP9.21□□□□□ -0.94
LRRC28-201ENST00000301981 TPM4P67936 248 aa9.21□□□□□ -0.94
LRRC28-201ENST00000301981 NUTM2AQ8IVF1 878 aaPredicted RBP9.21□□□□□ -0.94
LRRC28-201ENST00000301981 TAF7Q15545 349 aaPredicted RBP9.21□□□□□ -0.94
LRRC28-201ENST00000301981 FAM173BQ6P4H8 233 aa9.21□□□□□ -0.94
LRRC28-201ENST00000301981 CLCN1P35523 988 aa9.21□□□□□ -0.94
LRRC28-201ENST00000301981 NCBP3Q53F19 620 aaKnown RBP9.21□□□□□ -0.94
LRRC28-201ENST00000301981 RRP12Q5JTH9 1297 aaKnown RBP9.21□□□□□ -0.94
LRRC28-201ENST00000301981 PPP4R3BQ5MIZ7 849 aa9.21□□□□□ -0.94
LRRC28-201ENST00000301981 MPRIPQ6WCQ1 1025 aa9.21□□□□□ -0.94
LRRC28-201ENST00000301981 SPATA31E1Q6ZUB1 1445 aa9.2□□□□□ -0.94
LRRC28-201ENST00000301981 CCT2P78371 535 aaKnown RBP9.2□□□□□ -0.94
LRRC28-201ENST00000301981 NEXNQ0ZGT2 675 aa9.2□□□□□ -0.94
LRRC28-201ENST00000301981 ESCO1Q5FWF5 840 aa9.2□□□□□ -0.94
LRRC28-201ENST00000301981 CYP46A1Q9Y6A2 500 aa9.2□□□□□ -0.94
LRRC28-201ENST00000301981 BIN1O00499 593 aa9.2□□□□□ -0.94
LRRC28-201ENST00000301981 ME1P48163 572 aa9.2□□□□□ -0.94
LRRC28-201ENST00000301981 CCDC73Q6ZRK6 1079 aa9.2□□□□□ -0.94
LRRC28-201ENST00000301981 G2E3Q7L622 706 aa9.2□□□□□ -0.94
LRRC28-201ENST00000301981 USP48Q86UV5 1035 aa9.2□□□□□ -0.94
LRRC28-201ENST00000301981 RTEL1-TNFRSF6BF6WH68 1400 aa9.2□□□□□ -0.94
LRRC28-201ENST00000301981 MRC2Q9UBG0 1479 aa9.2□□□□□ -0.94
LRRC28-201ENST00000301981 GNAI3P08754 354 aa9.2□□□□□ -0.94
LRRC28-201ENST00000301981 BMP2KLQ5H9B9 411 aa9.2□□□□□ -0.94
LRRC28-201ENST00000301981 RAD21O60216 631 aa9.2□□□□□ -0.94
LRRC28-201ENST00000301981 TTC5Q8N0Z6 440 aa9.2□□□□□ -0.94
LRRC28-201ENST00000301981 SPATA32Q96LK8 384 aa9.2□□□□□ -0.94
LRRC28-201ENST00000301981 SCAF11Q99590 1463 aaKnown RBP9.2□□□□□ -0.94
LRRC28-201ENST00000301981 AAMPQ13685 434 aa9.19□□□□□ -0.94
LRRC28-201ENST00000301981 CCDC82Q8N4S0 544 aa9.19□□□□□ -0.94
LRRC28-201ENST00000301981 CWC22Q9HCG8 908 aaKnown RBP9.19□□□□□ -0.94
LRRC28-201ENST00000301981 CUL7Q14999 1698 aa9.19□□□□□ -0.94
LRRC28-201ENST00000301981 WDR33Q9C0J8 1336 aaKnown RBP9.19□□□□□ -0.94
LRRC28-201ENST00000301981 SRCIN1Q9C0H9 1055 aa9.19□□□□□ -0.94
LRRC28-201ENST00000301981 ZBTB40Q9NUA8 1239 aa9.19□□□□□ -0.94
LRRC28-201ENST00000301981 PEG3Q9GZU2 1588 aa9.19□□□□□ -0.94
LRRC28-201ENST00000301981 CEBPAP49715 358 aaPredicted RBP9.19□□□□□ -0.94
LRRC28-201ENST00000301981 FKBP4Q02790 459 aaKnown RBP eCLIP9.19□□□□□ -0.94
LRRC28-201ENST00000301981 MRPL50Q8N5N7 158 aaKnown RBP9.19□□□□□ -0.94
LRRC28-201ENST00000301981 CIZ1Q9ULV3 898 aaPredicted RBP9.19□□□□□ -0.94
LRRC28-201ENST00000301981 PA2G4Q9UQ80 394 aaKnown RBP9.19□□□□□ -0.94
LRRC28-201ENST00000301981 GADD45BO75293 160 aaPredicted RBP9.19□□□□□ -0.94
LRRC28-201ENST00000301981 FAM135AQ9P2D6 1515 aa9.19□□□□□ -0.94
LRRC28-201ENST00000301981 ASXL1Q8IXJ9 1541 aa9.18□□□□□ -0.94
LRRC28-201ENST00000301981 GJB2P29033 226 aa9.18□□□□□ -0.94
LRRC28-201ENST00000301981 PATL2C9JE40 543 aaKnown RBP9.18□□□□□ -0.94
LRRC28-201ENST00000301981 SYCP2Q9BX26 1530 aa9.18□□□□□ -0.94
LRRC28-201ENST00000301981 RAB3GAP1Q15042 981 aa9.18□□□□□ -0.94
LRRC28-201ENST00000301981 RNF20Q5VTR2 975 aa9.18□□□□□ -0.94
LRRC28-201ENST00000301981 TRIM35Q9UPQ4 493 aa9.18□□□□□ -0.94
LRRC28-201ENST00000301981 CCDC192P0DO97 292 aa9.18□□□□□ -0.94
LRRC28-201ENST00000301981 ZC3H6P61129 1189 aaKnown RBP9.18□□□□□ -0.94
LRRC28-201ENST00000301981 PLEKHM2Q8IWE5 1019 aa9.18□□□□□ -0.94
LRRC28-201ENST00000301981 PDCL2Q8N4E4 241 aa9.18□□□□□ -0.94
LRRC28-201ENST00000301981 NDUFB9Q9Y6M9 179 aa9.18□□□□□ -0.94
LRRC28-201ENST00000301981 NINLQ9Y2I6 1382 aa9.18□□□□□ -0.94
LRRC28-201ENST00000301981 ATP10BO94823 1461 aa9.18□□□□□ -0.94
LRRC28-201ENST00000301981 GRIN2AQ12879 1464 aa9.18□□□□□ -0.94
LRRC28-201ENST00000301981 HDAC1Q13547 482 aaPredicted RBP9.18□□□□□ -0.94
LRRC28-201ENST00000301981 A2MP01023 1474 aa9.17□□□□□ -0.94
LRRC28-201ENST00000301981 DNM1Q05193 864 aaKnown RBP9.17□□□□□ -0.94
LRRC28-201ENST00000301981 BBXQ8WY36 941 aaPredicted RBP9.17□□□□□ -0.94
LRRC28-201ENST00000301981 NUP62CLQ9H1M0 184 aa9.17□□□□□ -0.94
LRRC28-201ENST00000301981 VAMP4O75379 141 aa9.17□□□□□ -0.94
LRRC28-201ENST00000301981 KLHL40Q2TBA0 621 aa9.17□□□□□ -0.94
LRRC28-201ENST00000301981 ZNF530Q6P9A1 599 aaPredicted RBP9.17□□□□□ -0.94
LRRC28-201ENST00000301981 CHST3Q7LGC8 479 aa9.17□□□□□ -0.94
LRRC28-201ENST00000301981 CCDC144CPQ8IYA2 1237 aa9.17□□□□□ -0.94
LRRC28-201ENST00000301981 MNS1Q8NEH6 495 aa9.17□□□□□ -0.94
LRRC28-201ENST00000301981 KIF3AQ9Y496 699 aa9.17□□□□□ -0.94
LRRC28-201ENST00000301981 CCT4P50991 539 aaKnown RBP9.17□□□□□ -0.94
LRRC28-201ENST00000301981 LAMC3Q9Y6N6 1575 aa9.17□□□□□ -0.94
LRRC28-201ENST00000301981 CFAP65Q6ZU64 1925 aaKnown RBP9.17□□□□□ -0.94
LRRC28-201ENST00000301981 PCMTD1Q96MG8 357 aaPredicted RBP9.17□□□□□ -0.94
LRRC28-201ENST00000301981 KIF14Q15058 1648 aa9.17□□□□□ -0.94
LRRC28-201ENST00000301981 BTBD11A6QL63 1104 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms