RNA–Protein interactions for RNA: ENST00000301935.9

UBXN1-202, Transcript of UBX domain protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene UBXN1, Length 1,153 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-202ENST00000301935 KAT6BQ8WYB5 2073 aa20.6■□□□□ 0.89
UBXN1-202ENST00000301935 ZNF827Q17R98 1081 aa20.59■□□□□ 0.89
UBXN1-202ENST00000301935 KNSTRNQ9Y448 316 aa20.59■□□□□ 0.89
UBXN1-202ENST00000301935 TUBGCP6Q96RT7 1819 aa20.59■□□□□ 0.89
UBXN1-202ENST00000301935 LY75O60449 1722 aa20.58■□□□□ 0.89
UBXN1-202ENST00000301935 LRRC4BQ9NT99 713 aa20.58■□□□□ 0.89
UBXN1-202ENST00000301935 COL24A1Q17RW2 1714 aa20.58■□□□□ 0.88
UBXN1-202ENST00000301935 CHD4Q14839 1912 aa20.57■□□□□ 0.88
UBXN1-202ENST00000301935 PER1O15534 1290 aaPredicted RBP20.57■□□□□ 0.88
UBXN1-202ENST00000301935 MAP3K5Q99683 1374 aa20.57■□□□□ 0.88
UBXN1-202ENST00000301935 LTV1Q96GA3 475 aaPredicted RBP20.56■□□□□ 0.88
UBXN1-202ENST00000301935 DDX54Q8TDD1 881 aaKnown RBP20.55■□□□□ 0.88
UBXN1-202ENST00000301935 COG3Q96JB2 828 aa20.55■□□□□ 0.88
UBXN1-202ENST00000301935 ARXQ96QS3 562 aa20.55■□□□□ 0.88
UBXN1-202ENST00000301935 MAP3K19Q56UN5 1328 aa20.54■□□□□ 0.88
UBXN1-202ENST00000301935 HOXC9P31274 260 aa20.54■□□□□ 0.88
UBXN1-202ENST00000301935 SLC27A3Q5K4L6 730 aa20.54■□□□□ 0.88
UBXN1-202ENST00000301935 NPC1L1Q9UHC9 1359 aa20.54■□□□□ 0.88
UBXN1-202ENST00000301935 MEGF6O75095 1541 aa20.53■□□□□ 0.88
UBXN1-202ENST00000301935 AKT1S1Q96B36 256 aa20.53■□□□□ 0.88
UBXN1-202ENST00000301935 RTL1A6NKG5 1358 aa20.53■□□□□ 0.88
UBXN1-202ENST00000301935 NSD2O96028 1365 aa20.52■□□□□ 0.88
UBXN1-202ENST00000301935 CARD14Q9BXL6 1004 aa20.52■□□□□ 0.88
UBXN1-202ENST00000301935 CGNL1Q0VF96 1302 aa20.52■□□□□ 0.87
UBXN1-202ENST00000301935 ANP32CO43423 234 aa20.51■□□□□ 0.87
UBXN1-202ENST00000301935 KIF20BQ96Q89 1820 aa20.5■□□□□ 0.87
UBXN1-202ENST00000301935 AMPHP49418 695 aa20.5■□□□□ 0.87
UBXN1-202ENST00000301935 ZNF784Q8NCA9 323 aaPredicted RBP20.5■□□□□ 0.87
UBXN1-202ENST00000301935 SYTL4Q96C24 671 aaPredicted RBP20.5■□□□□ 0.87
UBXN1-202ENST00000301935 PNPLA7Q6ZV29 1317 aa20.5■□□□□ 0.87
UBXN1-202ENST00000301935 FBLN1P23142 703 aa20.49■□□□□ 0.87
UBXN1-202ENST00000301935 SLC16A10Q8TF71 515 aa20.49■□□□□ 0.87
UBXN1-202ENST00000301935 NSD3Q9BZ95 1437 aa20.49■□□□□ 0.87
UBXN1-202ENST00000301935 PRIM1P49642 420 aaKnown RBP20.47■□□□□ 0.87
UBXN1-202ENST00000301935 AMER1Q5JTC6 1135 aaPredicted RBP20.47■□□□□ 0.87
UBXN1-202ENST00000301935 ZCRB1Q8TBF4 217 aaKnown RBP20.47■□□□□ 0.87
UBXN1-202ENST00000301935 RALBP1Q15311 655 aa20.46■□□□□ 0.87
UBXN1-202ENST00000301935 SMG6Q86US8 1419 aaKnown RBP20.45■□□□□ 0.86
UBXN1-202ENST00000301935 POLD1P28340 1107 aa20.45■□□□□ 0.86
UBXN1-202ENST00000301935 KCNQ4P56696 695 aa20.45■□□□□ 0.86
UBXN1-202ENST00000301935 TFCP2L1Q9NZI6 479 aa20.45■□□□□ 0.86
UBXN1-202ENST00000301935 C5P01031 1676 aa20.45■□□□□ 0.86
UBXN1-202ENST00000301935 RRS1Q15050 365 aaKnown RBP20.44■□□□□ 0.86
UBXN1-202ENST00000301935 NBPF6Q5VWK0 638 aa20.43■□□□□ 0.86
UBXN1-202ENST00000301935 KLHL34Q8N239 644 aa20.43■□□□□ 0.86
UBXN1-202ENST00000301935 NBPF4Q96M43 638 aa20.43■□□□□ 0.86
UBXN1-202ENST00000301935 GOLGB1Q14789 3259 aaKnown RBP20.42■□□□□ 0.86
UBXN1-202ENST00000301935 FYB1O15117 783 aa20.42■□□□□ 0.86
UBXN1-202ENST00000301935 GGNBP2Q9H3C7 697 aa20.42■□□□□ 0.86
UBXN1-202ENST00000301935 PRKRIP1Q9H875 184 aaPredicted RBP20.42■□□□□ 0.86
UBXN1-202ENST00000301935 CCNL1Q9UK58 526 aaPredicted RBP20.42■□□□□ 0.86
UBXN1-202ENST00000301935 USHBP1Q8N6Y0 703 aa20.41■□□□□ 0.86
UBXN1-202ENST00000301935 TOGARAM1Q9Y4F4 1720 aa20.41■□□□□ 0.86
UBXN1-202ENST00000301935 TAF1LQ8IZX4 1826 aa20.41■□□□□ 0.86
UBXN1-202ENST00000301935 GPR162Q16538 588 aa20.4■□□□□ 0.86
UBXN1-202ENST00000301935 PKD1L3Q7Z443 1732 aa20.39■□□□□ 0.86
UBXN1-202ENST00000301935 INSRP06213 1382 aa20.39■□□□□ 0.85
UBXN1-202ENST00000301935 FLT4P35916 1363 aa20.39■□□□□ 0.85
UBXN1-202ENST00000301935 KIF24Q5T7B8 1368 aa20.39■□□□□ 0.85
UBXN1-202ENST00000301935 CC2D1BQ5T0F9 858 aaKnown RBP20.39■□□□□ 0.85
UBXN1-202ENST00000301935 RAPGEF4Q8WZA2 1011 aa20.39■□□□□ 0.85
UBXN1-202ENST00000301935 ANKRD26Q9UPS8 1709 aa20.39■□□□□ 0.85
UBXN1-202ENST00000301935 MORC1Q86VD1 984 aa20.38■□□□□ 0.85
UBXN1-202ENST00000301935 ITGB4P16144 1822 aa20.37■□□□□ 0.85
UBXN1-202ENST00000301935 PCDH11XQ9BZA7 1347 aa20.37■□□□□ 0.85
UBXN1-202ENST00000301935 PCDH11YQ9BZA8 1340 aa20.37■□□□□ 0.85
UBXN1-202ENST00000301935 TATP17735 454 aaPredicted RBP20.36■□□□□ 0.85
UBXN1-202ENST00000301935 HSP90AB2PQ58FF8 381 aa20.36■□□□□ 0.85
UBXN1-202ENST00000301935 NLGN2Q8NFZ4 835 aa20.36■□□□□ 0.85
UBXN1-202ENST00000301935 CCER2I3L3R5 266 aa20.34■□□□□ 0.85
UBXN1-202ENST00000301935 COL23A1Q86Y22 540 aaPredicted RBP20.34■□□□□ 0.85
UBXN1-202ENST00000301935 PELP1Q8IZL8 1130 aaKnown RBP20.34■□□□□ 0.85
UBXN1-202ENST00000301935 PALLDQ8WX93 1383 aa20.34■□□□□ 0.85
UBXN1-202ENST00000301935 C4BP0C0L5 1744 aa20.33■□□□□ 0.85
UBXN1-202ENST00000301935 MYBBP1AQ9BQG0 1328 aaKnown RBP20.33■□□□□ 0.85
UBXN1-202ENST00000301935 MSH5O43196 834 aa20.33■□□□□ 0.85
UBXN1-202ENST00000301935 MIER1Q8N108 512 aa20.33■□□□□ 0.85
UBXN1-202ENST00000301935 NCAPD2Q15021 1401 aa20.33■□□□□ 0.84
UBXN1-202ENST00000301935 C1QTNF8P60827 252 aa20.32■□□□□ 0.84
UBXN1-202ENST00000301935 UBR3Q6ZT12 1888 aa20.3■□□□□ 0.84
UBXN1-202ENST00000301935 CYP27B1O15528 508 aa20.3■□□□□ 0.84
UBXN1-202ENST00000301935 SENP3-EIF4A1A0A087X0R7 540 aa20.29■□□□□ 0.84
UBXN1-202ENST00000301935 CNGB1Q14028 1251 aaPredicted RBP20.29■□□□□ 0.84
UBXN1-202ENST00000301935 MSL1Q68DK7 614 aa20.29■□□□□ 0.84
UBXN1-202ENST00000301935 EMILIN1Q9Y6C2 1016 aa20.29■□□□□ 0.84
UBXN1-202ENST00000301935 MAP2P11137 1827 aaKnown RBP20.28■□□□□ 0.84
UBXN1-202ENST00000301935 YBX3P16989 372 aaKnown RBP eCLIP20.28■□□□□ 0.84
UBXN1-202ENST00000301935 HMGB2P26583 209 aaKnown RBP20.28■□□□□ 0.84
UBXN1-202ENST00000301935 MPRIPQ6WCQ1 1025 aa20.28■□□□□ 0.84
UBXN1-202ENST00000301935 FLAD1Q8NFF5 587 aa20.27■□□□□ 0.84
UBXN1-202ENST00000301935 GRIN3BO60391 1043 aa20.26■□□□□ 0.83
UBXN1-202ENST00000301935 GIGYF1O75420 1035 aaPredicted RBP20.26■□□□□ 0.83
UBXN1-202ENST00000301935 PPP2R1AP30153 589 aa20.26■□□□□ 0.83
UBXN1-202ENST00000301935 SMARCC1Q92922 1105 aaPredicted RBP20.25■□□□□ 0.83
UBXN1-202ENST00000301935 NKX1-1Q15270 411 aaPredicted RBP20.23■□□□□ 0.83
UBXN1-202ENST00000301935 AK7Q96M32 723 aa20.23■□□□□ 0.83
UBXN1-202ENST00000301935 CD2APQ9Y5K6 639 aa20.23■□□□□ 0.83
UBXN1-202ENST00000301935 PPM1GO15355 546 aaPredicted RBP20.21■□□□□ 0.83
UBXN1-202ENST00000301935 TNNT2P45379 298 aaPredicted RBP20.21■□□□□ 0.83
UBXN1-202ENST00000301935 AMIGO3Q86WK7 504 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms