RNA–Protein interactions for RNA: ENST00000300648.6

GCN1-201, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCN1, Length 8,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-201ENST00000300648 EHBP1Q8NDI1 1231 aa13.23□□□□□ -0.29
GCN1-201ENST00000300648 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.23□□□□□ -0.29
GCN1-201ENST00000300648 KIAA1328Q86T90 577 aa13.23□□□□□ -0.29
GCN1-201ENST00000300648 NAA15Q9BXJ9 866 aaKnown RBP13.23□□□□□ -0.29
GCN1-201ENST00000300648 DYNC1I1O14576 645 aa13.22□□□□□ -0.29
GCN1-201ENST00000300648 MAP2K1Q02750 393 aaPredicted RBP13.22□□□□□ -0.29
GCN1-201ENST00000300648 CCDC158Q5M9N0 1113 aa13.22□□□□□ -0.29
GCN1-201ENST00000300648 SPC24Q8NBT2 197 aa13.22□□□□□ -0.29
GCN1-201ENST00000300648 AQRO60306 1485 aaKnown RBP eCLIP13.22□□□□□ -0.295e-7■■■■■ 34.7
GCN1-201ENST00000300648 SPECC1LQ69YQ0 1117 aa13.22□□□□□ -0.29
GCN1-201ENST00000300648 PYM1Q9BRP8 204 aaKnown RBP13.22□□□□□ -0.29
GCN1-201ENST00000300648 ANKRD18BA2A2Z9 1011 aa13.22□□□□□ -0.29
GCN1-201ENST00000300648 MCM4P33991 863 aa13.22□□□□□ -0.29
GCN1-201ENST00000300648 CCDC183Q5T5S1 534 aa13.22□□□□□ -0.29
GCN1-201ENST00000300648 PRIMPOLQ96LW4 560 aa13.22□□□□□ -0.29
GCN1-201ENST00000300648 NEUROD6Q96NK8 337 aa13.22□□□□□ -0.29
GCN1-201ENST00000300648 CENPHQ9H3R5 247 aa13.22□□□□□ -0.29
GCN1-201ENST00000300648 LARP1BQ659C4 914 aaKnown RBP13.21□□□□□ -0.29
GCN1-201ENST00000300648 SPA17Q15506 151 aa13.21□□□□□ -0.29
GCN1-201ENST00000300648 TAX1BP1Q86VP1 789 aa13.21□□□□□ -0.29
GCN1-201ENST00000300648 LRRFIP2Q9Y608 721 aaKnown RBP13.21□□□□□ -0.29
GCN1-201ENST00000300648 ATAD2Q6PL18 1390 aa13.21□□□□□ -0.29
GCN1-201ENST00000300648 ANKRD62A6NC57 917 aa13.21□□□□□ -0.29
GCN1-201ENST00000300648 IVLP07476 585 aa13.21□□□□□ -0.29
GCN1-201ENST00000300648 BRPF3Q9ULD4 1205 aa13.21□□□□□ -0.29
GCN1-201ENST00000300648 SH2B1Q9NRF2 756 aaPredicted RBP13.21□□□□□ -0.3
GCN1-201ENST00000300648 PANK1Q8TE04 598 aa13.21□□□□□ -0.3
GCN1-201ENST00000300648 FMNL2Q96PY5 1086 aa13.21□□□□□ -0.3
GCN1-201ENST00000300648 PAXBP1Q9Y5B6 917 aa13.2□□□□□ -0.3
GCN1-201ENST00000300648 CCDC27Q2M243 656 aa13.2□□□□□ -0.3
GCN1-201ENST00000300648 KIF6Q6ZMV9 814 aa13.2□□□□□ -0.3
GCN1-201ENST00000300648 BBXQ8WY36 941 aaPredicted RBP13.2□□□□□ -0.3
GCN1-201ENST00000300648 KIF14Q15058 1648 aa13.2□□□□□ -0.3
GCN1-201ENST00000300648 BRPF1P55201 1214 aaPredicted RBP13.2□□□□□ -0.3
GCN1-201ENST00000300648 ITSN2Q9NZM3 1697 aa13.2□□□□□ -0.3
GCN1-201ENST00000300648 C9orf84Q5VXU9 1444 aa13.2□□□□□ -0.3
GCN1-201ENST00000300648 KIAA1107Q9UPP5 1409 aa13.2□□□□□ -0.3
GCN1-201ENST00000300648 ANO10Q9NW15 660 aa13.2□□□□□ -0.3
GCN1-201ENST00000300648 KIF20AO95235 890 aa13.2□□□□□ -0.3
GCN1-201ENST00000300648 TROQ12816 1431 aaPredicted RBP13.2□□□□□ -0.3
GCN1-201ENST00000300648 CCDC69A6NI79 296 aa13.19□□□□□ -0.3
GCN1-201ENST00000300648 ZNF287Q9HBT7 754 aa13.19□□□□□ -0.3
GCN1-201ENST00000300648 BLOC1S2Q6QNY1 142 aa13.19□□□□□ -0.3
GCN1-201ENST00000300648 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.19□□□□□ -0.3
GCN1-201ENST00000300648 SURF6O75683 361 aaKnown RBP13.19□□□□□ -0.3
GCN1-201ENST00000300648 CCDC175P0C221 793 aa13.18□□□□□ -0.3
GCN1-201ENST00000300648 CASQ1P31415 396 aa13.18□□□□□ -0.3
GCN1-201ENST00000300648 CTR9Q6PD62 1173 aa13.18□□□□□ -0.3
GCN1-201ENST00000300648 C6orf163Q5TEZ5 329 aa13.18□□□□□ -0.3
GCN1-201ENST00000300648 IQGAP2Q13576 1575 aa13.18□□□□□ -0.3
GCN1-201ENST00000300648 FKBP15Q5T1M5 1219 aa13.18□□□□□ -0.3
GCN1-201ENST00000300648 PAF1Q8N7H5 531 aa13.17□□□□□ -0.3
GCN1-201ENST00000300648 ALS2CR12Q96Q35 445 aa13.17□□□□□ -0.3
GCN1-201ENST00000300648 CCDC196A0A1B0GTZ2 297 aa13.17□□□□□ -0.3
GCN1-201ENST00000300648 CFAP57Q96MR6 1250 aa13.17□□□□□ -0.3
GCN1-201ENST00000300648 EPRSP07814 1512 aaKnown RBP13.17□□□□□ -0.3
GCN1-201ENST00000300648 USO1O60763 962 aaKnown RBP13.17□□□□□ -0.3
GCN1-201ENST00000300648 TMEM132AQ24JP5 1023 aa13.17□□□□□ -0.3
GCN1-201ENST00000300648 PLEKHO1Q53GL0 409 aaPredicted RBP13.17□□□□□ -0.3
GCN1-201ENST00000300648 EIF5P55010 431 aaKnown RBP13.17□□□□□ -0.3
GCN1-201ENST00000300648 RBM10P98175 930 aaKnown RBP13.17□□□□□ -0.3
GCN1-201ENST00000300648 MVPQ14764 893 aaKnown RBP13.17□□□□□ -0.3
GCN1-201ENST00000300648 SOGA3Q5TF21 947 aa13.17□□□□□ -0.3
GCN1-201ENST00000300648 PDZRN3Q9UPQ7 1066 aa13.17□□□□□ -0.3
GCN1-201ENST00000300648 TANGO6Q9C0B7 1094 aa13.16□□□□□ -0.3
GCN1-201ENST00000300648 RAB34Q9BZG1 259 aa13.16□□□□□ -0.3
GCN1-201ENST00000300648 THOC2Q8NI27 1593 aaKnown RBP13.16□□□□□ -0.3
GCN1-201ENST00000300648 IKQ13123 557 aaPredicted RBP13.16□□□□□ -0.3
GCN1-201ENST00000300648 UBE2Q2Q8WVN8 375 aa13.16□□□□□ -0.3
GCN1-201ENST00000300648 CFAP100Q494V2 611 aa13.16□□□□□ -0.3
GCN1-201ENST00000300648 THEMISQ8N1K5 641 aaPredicted RBP13.16□□□□□ -0.3
GCN1-201ENST00000300648 AKNAQ7Z591 1439 aa13.15□□□□□ -0.3
GCN1-201ENST00000300648 PAFAH1B1P43034 410 aa13.15□□□□□ -0.3
GCN1-201ENST00000300648 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.15□□□□□ -0.32e-6■■□□□ 12.1
GCN1-201ENST00000300648 V9GYY5 206 aaPredicted RBP13.15□□□□□ -0.3
GCN1-201ENST00000300648 MINK1Q8N4C8 1332 aaPredicted RBP13.15□□□□□ -0.3
GCN1-201ENST00000300648 ATF7IPQ6VMQ6 1270 aa13.15□□□□□ -0.3
GCN1-201ENST00000300648 CHD1LQ86WJ1 897 aa13.15□□□□□ -0.3
GCN1-201ENST00000300648 FOSBP53539 338 aa13.15□□□□□ -0.3
GCN1-201ENST00000300648 FBXO3Q9UK99 471 aa13.15□□□□□ -0.3
GCN1-201ENST00000300648 TTC39AQ5SRH9 613 aa13.15□□□□□ -0.31
GCN1-201ENST00000300648 CEP63Q96MT8 703 aa13.15□□□□□ -0.31
GCN1-201ENST00000300648 U3KPZ7 1027 aaPredicted RBP13.14□□□□□ -0.31
GCN1-201ENST00000300648 TUBBP07437 444 aa13.14□□□□□ -0.31
GCN1-201ENST00000300648 TIGD1Q96MW7 591 aa13.14□□□□□ -0.31
GCN1-201ENST00000300648 DNAJC2Q99543 621 aaKnown RBP13.14□□□□□ -0.31
GCN1-201ENST00000300648 DNAAF4Q8WXU2 420 aa13.14□□□□□ -0.31
GCN1-201ENST00000300648 TSG101Q99816 390 aa13.14□□□□□ -0.31
GCN1-201ENST00000300648 UVSSAQ2YD98 709 aa13.14□□□□□ -0.31
GCN1-201ENST00000300648 HOOK3Q86VS8 718 aa13.14□□□□□ -0.31
GCN1-201ENST00000300648 PDRG1Q9NUG6 133 aa13.14□□□□□ -0.31
GCN1-201ENST00000300648 IFFO1Q0D2I5 559 aa13.14□□□□□ -0.31
GCN1-201ENST00000300648 RAB11FIP3O75154 756 aa13.14□□□□□ -0.31
GCN1-201ENST00000300648 CCDC150Q8NCX0 1101 aa13.14□□□□□ -0.31
GCN1-201ENST00000300648 GOLIM4O00461 696 aa13.14□□□□□ -0.31
GCN1-201ENST00000300648 TWISTNBQ3B726 338 aaPredicted RBP13.14□□□□□ -0.31
GCN1-201ENST00000300648 CCDC171Q6TFL3 1326 aa13.13□□□□□ -0.31
GCN1-201ENST00000300648 ABCC11Q96J66 1382 aa13.13□□□□□ -0.31
GCN1-201ENST00000300648 BMS1Q14692 1282 aaKnown RBP13.13□□□□□ -0.31
GCN1-201ENST00000300648 SREK1Q8WXA9 508 aaKnown RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms