RNA–Protein interactions for RNA: ENST00000300413.9

SNRPD1-201, Transcript of small nuclear ribonucleoprotein D1 polypeptide, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPD1, Length 4,909 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD1-201ENST00000300413 AMOTL1Q8IY63 956 aa10.2□□□□□ -0.78
SNRPD1-201ENST00000300413 CLASRPQ8N2M8 674 aaKnown RBP10.2□□□□□ -0.78
SNRPD1-201ENST00000300413 ROBO2Q9HCK4 1378 aa10.2□□□□□ -0.78
SNRPD1-201ENST00000300413 ALKQ9UM73 1620 aa10.2□□□□□ -0.78
SNRPD1-201ENST00000300413 PLEKHH1Q9ULM0 1364 aa10.2□□□□□ -0.78
SNRPD1-201ENST00000300413 PTMSP20962 102 aa10.2□□□□□ -0.78
SNRPD1-201ENST00000300413 FAM161AQ3B820 660 aa10.2□□□□□ -0.78
SNRPD1-201ENST00000300413 KIF3AQ9Y496 699 aa10.2□□□□□ -0.78
SNRPD1-201ENST00000300413 FANCIQ9NVI1 1328 aa10.2□□□□□ -0.78
SNRPD1-201ENST00000300413 MCM10Q7L590 875 aa10.19□□□□□ -0.78
SNRPD1-201ENST00000300413 DIAPH3Q9NSV4 1193 aa10.19□□□□□ -0.78
SNRPD1-201ENST00000300413 PCDH11XQ9BZA7 1347 aa10.19□□□□□ -0.78
SNRPD1-201ENST00000300413 PCDH11YQ9BZA8 1340 aa10.19□□□□□ -0.78
SNRPD1-201ENST00000300413 DLC1Q96QB1 1528 aa10.19□□□□□ -0.78
SNRPD1-201ENST00000300413 ORAI2Q96SN7 254 aa10.19□□□□□ -0.78
SNRPD1-201ENST00000300413 VPS37DQ86XT2 251 aa10.19□□□□□ -0.78
SNRPD1-201ENST00000300413 USHBP1Q8N6Y0 703 aa10.19□□□□□ -0.78
SNRPD1-201ENST00000300413 PTCH1Q13635 1447 aa10.19□□□□□ -0.78
SNRPD1-201ENST00000300413 CHRNA2Q15822 529 aa10.19□□□□□ -0.78
SNRPD1-201ENST00000300413 PANK1Q8TE04 598 aa10.19□□□□□ -0.78
SNRPD1-201ENST00000300413 TRPM1Q7Z4N2 1603 aa10.19□□□□□ -0.78
SNRPD1-201ENST00000300413 ADGRL3Q9HAR2 1447 aa10.18□□□□□ -0.78
SNRPD1-201ENST00000300413 MFAP1P55081 439 aaKnown RBP10.18□□□□□ -0.78
SNRPD1-201ENST00000300413 MAP3K5Q99683 1374 aa10.18□□□□□ -0.78
SNRPD1-201ENST00000300413 HIP1O00291 1037 aa10.18□□□□□ -0.78
SNRPD1-201ENST00000300413 SNRPA1P09661 255 aaKnown RBP10.18□□□□□ -0.78
SNRPD1-201ENST00000300413 DCAF5Q96JK2 942 aa10.18□□□□□ -0.78
SNRPD1-201ENST00000300413 SPATA31D1Q6ZQQ2 1576 aa10.18□□□□□ -0.78
SNRPD1-201ENST00000300413 ARHGAP45Q92619 1136 aa10.18□□□□□ -0.78
SNRPD1-201ENST00000300413 MADDQ8WXG6 1647 aa10.18□□□□□ -0.78
SNRPD1-201ENST00000300413 ZRSR1Q15695 479 aaKnown RBP10.18□□□□□ -0.78
SNRPD1-201ENST00000300413 DDB1Q16531 1140 aa10.18□□□□□ -0.78
SNRPD1-201ENST00000300413 ANO8Q9HCE9 1232 aaPredicted RBP10.18□□□□□ -0.78
SNRPD1-201ENST00000300413 VWDEQ8N2E2 1590 aa10.17□□□□□ -0.78
SNRPD1-201ENST00000300413 ST18O60284 1047 aa10.17□□□□□ -0.78
SNRPD1-201ENST00000300413 DEPDC5O75140 1603 aa10.17□□□□□ -0.78
SNRPD1-201ENST00000300413 MPRIPQ6WCQ1 1025 aa10.17□□□□□ -0.78
SNRPD1-201ENST00000300413 USP6P35125 1406 aa10.17□□□□□ -0.78
SNRPD1-201ENST00000300413 RARSP54136 660 aaKnown RBP10.17□□□□□ -0.78
SNRPD1-201ENST00000300413 NAP1L2Q9ULW6 460 aaPredicted RBP10.16□□□□□ -0.78
SNRPD1-201ENST00000300413 RNF20Q5VTR2 975 aa10.16□□□□□ -0.78
SNRPD1-201ENST00000300413 INTS3Q68E01 1043 aaKnown RBP10.16□□□□□ -0.78
SNRPD1-201ENST00000300413 GNL3LQ9NVN8 582 aaKnown RBP10.16□□□□□ -0.78
SNRPD1-201ENST00000300413 DIP2AQ14689 1571 aa10.16□□□□□ -0.78
SNRPD1-201ENST00000300413 PTPRMP28827 1452 aa10.16□□□□□ -0.78
SNRPD1-201ENST00000300413 EYA1Q99502 592 aa10.16□□□□□ -0.78
SNRPD1-201ENST00000300413 IL13P35225 146 aa10.15□□□□□ -0.78
SNRPD1-201ENST00000300413 RILPL2Q969X0 211 aa10.15□□□□□ -0.78
SNRPD1-201ENST00000300413 SURF6O75683 361 aaKnown RBP10.15□□□□□ -0.78
SNRPD1-201ENST00000300413 HOXB7P09629 217 aa10.15□□□□□ -0.78
SNRPD1-201ENST00000300413 ZKSCAN1P17029 563 aaPredicted RBP10.15□□□□□ -0.78
SNRPD1-201ENST00000300413 RSPH6AQ9H0K4 717 aa10.15□□□□□ -0.79
SNRPD1-201ENST00000300413 KIAA1210Q9ULL0 1709 aa10.15□□□□□ -0.79
SNRPD1-201ENST00000300413 PREX1Q8TCU6 1659 aa10.14□□□□□ -0.79
SNRPD1-201ENST00000300413 ZPR1O75312 459 aa10.14□□□□□ -0.79
SNRPD1-201ENST00000300413 BCAR3O75815 825 aa10.14□□□□□ -0.79
SNRPD1-201ENST00000300413 MYL6BP14649 208 aa10.14□□□□□ -0.79
SNRPD1-201ENST00000300413 CCDC57Q2TAC2 916 aa10.14□□□□□ -0.79
SNRPD1-201ENST00000300413 NCOA3Q9Y6Q9 1424 aa10.14□□□□□ -0.79
SNRPD1-201ENST00000300413 CNTROBQ8N137 903 aa10.14□□□□□ -0.79
SNRPD1-201ENST00000300413 C8orf37Q96NL8 207 aa10.14□□□□□ -0.79
SNRPD1-201ENST00000300413 ZRANB1Q9UGI0 708 aa10.14□□□□□ -0.79
SNRPD1-201ENST00000300413 FRMPD1Q5SYB0 1578 aa10.14□□□□□ -0.79
SNRPD1-201ENST00000300413 TULP4Q9NRJ4 1543 aa10.14□□□□□ -0.79
SNRPD1-201ENST00000300413 DNAAF4Q8WXU2 420 aa10.14□□□□□ -0.79
SNRPD1-201ENST00000300413 TBC1D2BQ9UPU7 963 aa10.14□□□□□ -0.79
SNRPD1-201ENST00000300413 NEXMIFQ5QGS0 1516 aa10.13□□□□□ -0.79
SNRPD1-201ENST00000300413 RICTORQ6R327 1708 aa10.13□□□□□ -0.79
SNRPD1-201ENST00000300413 RAB11FIP3O75154 756 aa10.13□□□□□ -0.79
SNRPD1-201ENST00000300413 SSH1Q8WYL5 1049 aa10.13□□□□□ -0.79
SNRPD1-201ENST00000300413 MBIPQ9NS73 344 aa10.13□□□□□ -0.79
SNRPD1-201ENST00000300413 DCAF8L1A6NGE4 600 aa10.13□□□□□ -0.79
SNRPD1-201ENST00000300413 ADRA2BP18089 450 aa10.13□□□□□ -0.79
SNRPD1-201ENST00000300413 DCTN1Q14203 1278 aa10.13□□□□□ -0.79
SNRPD1-201ENST00000300413 THUMPD2Q9BTF0 503 aaKnown RBP10.13□□□□□ -0.79
SNRPD1-201ENST00000300413 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.13□□□□□ -0.792e-8■□□□□ 11.1
SNRPD1-201ENST00000300413 CEP170BQ9Y4F5 1589 aaPredicted RBP10.13□□□□□ -0.79
SNRPD1-201ENST00000300413 PTCD1O75127 700 aaKnown RBP10.12□□□□□ -0.79
SNRPD1-201ENST00000300413 CCDC158Q5M9N0 1113 aa10.12□□□□□ -0.79
SNRPD1-201ENST00000300413 BTG4Q9NY30 223 aa10.12□□□□□ -0.79
SNRPD1-201ENST00000300413 CDC45O75419 566 aa10.12□□□□□ -0.79
SNRPD1-201ENST00000300413 LRRCC1Q9C099 1032 aa10.12□□□□□ -0.79
SNRPD1-201ENST00000300413 CNNM1Q9NRU3 951 aa10.12□□□□□ -0.79
SNRPD1-201ENST00000300413 CDC42BPGQ6DT37 1551 aa10.12□□□□□ -0.79
SNRPD1-201ENST00000300413 MTHFSDQ2M296 383 aaKnown RBP10.12□□□□□ -0.79
SNRPD1-201ENST00000300413 PIK3C2BO00750 1634 aa10.12□□□□□ -0.79
SNRPD1-201ENST00000300413 FLIIQ13045 1269 aa10.12□□□□□ -0.79
SNRPD1-201ENST00000300413 CABLES1Q8TDN4 633 aa10.12□□□□□ -0.79
SNRPD1-201ENST00000300413 NOP58Q9Y2X3 529 aaKnown RBP10.12□□□□□ -0.79
SNRPD1-201ENST00000300413 GOLGA6L4A6NEF3 574 aa10.11□□□□□ -0.79
SNRPD1-201ENST00000300413 CPLX2Q6PUV4 134 aaKnown RBP10.11□□□□□ -0.79
SNRPD1-201ENST00000300413 MPHOSPH8Q99549 860 aa10.11□□□□□ -0.79
SNRPD1-201ENST00000300413 NEUROD6Q96NK8 337 aa10.11□□□□□ -0.79
SNRPD1-201ENST00000300413 IGHMBP2P38935 993 aaKnown RBP10.11□□□□□ -0.79
SNRPD1-201ENST00000300413 GNL2Q13823 731 aaKnown RBP10.11□□□□□ -0.79
SNRPD1-201ENST00000300413 ZSCAN25Q6NSZ9 544 aa10.11□□□□□ -0.79
SNRPD1-201ENST00000300413 SETD1BQ9UPS6 1966 aaKnown RBP10.11□□□□□ -0.79
SNRPD1-201ENST00000300413 CSPP1Q1MSJ5 1256 aa10.11□□□□□ -0.79
SNRPD1-201ENST00000300413 AKAP2Q9Y2D5 859 aa10.11□□□□□ -0.79
SNRPD1-201ENST00000300413 NRXN1Q9ULB1 1477 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms