RNA–Protein interactions for RNA: ENST00000300302.9

HERPUD1-201, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERPUD1, Length 1,862 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-201ENST00000300302 RGPD2P0DJD1 1756 aa20.25■□□□□ 0.83
HERPUD1-201ENST00000300302 CAMTA1Q9Y6Y1 1673 aa20.24■□□□□ 0.83
HERPUD1-201ENST00000300302 GNAT3A8MTJ3 354 aa20.24■□□□□ 0.83
HERPUD1-201ENST00000300302 PDE3AQ14432 1141 aa20.24■□□□□ 0.83
HERPUD1-201ENST00000300302 C20orf194Q5TEA3 1177 aa20.24■□□□□ 0.83
HERPUD1-201ENST00000300302 RGPD5Q99666 1765 aa20.24■□□□□ 0.83
HERPUD1-201ENST00000300302 KIAA0232Q92628 1395 aa20.23■□□□□ 0.83
HERPUD1-201ENST00000300302 MAP3K5Q99683 1374 aa20.23■□□□□ 0.83
HERPUD1-201ENST00000300302 COL18A1P39060 1754 aa20.23■□□□□ 0.83
HERPUD1-201ENST00000300302 HAP1P54257 671 aaPredicted RBP20.22■□□□□ 0.83
HERPUD1-201ENST00000300302 FRAT1Q92837 279 aaPredicted RBP20.22■□□□□ 0.83
HERPUD1-201ENST00000300302 ALDH1L2Q3SY69 923 aa20.22■□□□□ 0.83
HERPUD1-201ENST00000300302 SMC4Q9NTJ3 1288 aa20.22■□□□□ 0.83
HERPUD1-201ENST00000300302 CRB1P82279 1406 aa20.21■□□□□ 0.83
HERPUD1-201ENST00000300302 AHDC1Q5TGY3 1603 aaPredicted RBP20.21■□□□□ 0.83
HERPUD1-201ENST00000300302 CHL1O00533 1208 aa20.21■□□□□ 0.83
HERPUD1-201ENST00000300302 AMOTQ4VCS5 1084 aa20.21■□□□□ 0.83
HERPUD1-201ENST00000300302 BCL2L13Q9BXK5 485 aa20.21■□□□□ 0.83
HERPUD1-201ENST00000300302 FAM208AQ9UK61 1670 aaKnown RBP20.21■□□□□ 0.83
HERPUD1-201ENST00000300302 PLEKHO1Q53GL0 409 aaPredicted RBP20.2■□□□□ 0.82
HERPUD1-201ENST00000300302 LMO7Q8WWI1 1683 aa20.19■□□□□ 0.82
HERPUD1-201ENST00000300302 SSH1Q8WYL5 1049 aa20.19■□□□□ 0.82
HERPUD1-201ENST00000300302 CSB-PGBD3P0DP91 1061 aa20.18■□□□□ 0.82
HERPUD1-201ENST00000300302 MS4A1P11836 297 aa20.18■□□□□ 0.82
HERPUD1-201ENST00000300302 CHRNA2Q15822 529 aa20.18■□□□□ 0.82
HERPUD1-201ENST00000300302 TWISTNBQ3B726 338 aaPredicted RBP20.18■□□□□ 0.82
HERPUD1-201ENST00000300302 ZKSCAN2Q63HK3 967 aa20.18■□□□□ 0.82
HERPUD1-201ENST00000300302 PRDM11Q9NQV5 511 aa20.18■□□□□ 0.82
HERPUD1-201ENST00000300302 NLRP2Q9NX02 1062 aa20.18■□□□□ 0.82
HERPUD1-201ENST00000300302 KIF16BQ96L93 1317 aa20.17■□□□□ 0.82
HERPUD1-201ENST00000300302 LRRC37A3O60309 1634 aa20.17■□□□□ 0.82
HERPUD1-201ENST00000300302 ABCA3Q99758 1704 aa20.17■□□□□ 0.82
HERPUD1-201ENST00000300302 VAMP4O75379 141 aa20.17■□□□□ 0.82
HERPUD1-201ENST00000300302 IPO8O15397 1037 aaKnown RBP20.15■□□□□ 0.82
HERPUD1-201ENST00000300302 AKAP4Q5JQC9 854 aa20.15■□□□□ 0.82
HERPUD1-201ENST00000300302 ZNF530Q6P9A1 599 aaPredicted RBP20.15■□□□□ 0.82
HERPUD1-201ENST00000300302 TSPYL6Q8N831 410 aa20.15■□□□□ 0.82
HERPUD1-201ENST00000300302 RAPGEF4Q8WZA2 1011 aa20.15■□□□□ 0.82
HERPUD1-201ENST00000300302 BABAM1Q9NWV8 329 aa20.15■□□□□ 0.82
HERPUD1-201ENST00000300302 TSPYL4Q9UJ04 414 aa20.15■□□□□ 0.82
HERPUD1-201ENST00000300302 BRPF1P55201 1214 aaPredicted RBP20.14■□□□□ 0.81
HERPUD1-201ENST00000300302 C1orf141Q5JVX7 400 aa20.14■□□□□ 0.81
HERPUD1-201ENST00000300302 C8orf58Q8NAV2 365 aa20.14■□□□□ 0.81
HERPUD1-201ENST00000300302 PLEKHG2Q9H7P9 1386 aa20.14■□□□□ 0.81
HERPUD1-201ENST00000300302 IL17REQ8NFR9 667 aa20.13■□□□□ 0.81
HERPUD1-201ENST00000300302 PHLPP1O60346 1717 aa20.13■□□□□ 0.81
HERPUD1-201ENST00000300302 ELL2O00472 640 aaPredicted RBP20.13■□□□□ 0.81
HERPUD1-201ENST00000300302 PANK1Q8TE04 598 aa20.13■□□□□ 0.81
HERPUD1-201ENST00000300302 FTSJ3Q8IY81 847 aaKnown RBP20.12■□□□□ 0.81
HERPUD1-201ENST00000300302 COL16A1Q07092 1604 aaPredicted RBP20.12■□□□□ 0.81
HERPUD1-201ENST00000300302 TATP17735 454 aaPredicted RBP20.11■□□□□ 0.81
HERPUD1-201ENST00000300302 AAMPQ13685 434 aa20.11■□□□□ 0.81
HERPUD1-201ENST00000300302 TAF7Q15545 349 aaPredicted RBP20.11■□□□□ 0.81
HERPUD1-201ENST00000300302 CEMIPQ8WUJ3 1361 aa20.11■□□□□ 0.81
HERPUD1-201ENST00000300302 NOB1Q9ULX3 412 aaKnown RBP20.11■□□□□ 0.81
HERPUD1-201ENST00000300302 ATF7IPQ6VMQ6 1270 aa20.11■□□□□ 0.81
HERPUD1-201ENST00000300302 DZIP1LQ8IYY4 767 aaKnown RBP20.11■□□□□ 0.81
HERPUD1-201ENST00000300302 COG6Q9Y2V7 657 aa20.11■□□□□ 0.81
HERPUD1-201ENST00000300302 WDR17Q8IZU2 1322 aa20.09■□□□□ 0.81
HERPUD1-201ENST00000300302 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.09■□□□□ 0.81
HERPUD1-201ENST00000300302 MIS18AQ9NYP9 233 aa20.09■□□□□ 0.81
HERPUD1-201ENST00000300302 OVOS2A0A0G2JMS6 1433 aa20.09■□□□□ 0.81
HERPUD1-201ENST00000300302 TRIM27P14373 513 aa20.09■□□□□ 0.81
HERPUD1-201ENST00000300302 MRPL50Q8N5N7 158 aaKnown RBP20.09■□□□□ 0.81
HERPUD1-201ENST00000300302 CLUAP1Q96AJ1 413 aa20.09■□□□□ 0.81
HERPUD1-201ENST00000300302 SPG7Q9UQ90 795 aa20.09■□□□□ 0.81
HERPUD1-201ENST00000300302 COL5A2P05997 1499 aaPredicted RBP20.08■□□□□ 0.8
HERPUD1-201ENST00000300302 RLBP1P12271 317 aa20.07■□□□□ 0.8
HERPUD1-201ENST00000300302 ARHGAP45Q92619 1136 aa20.07■□□□□ 0.8
HERPUD1-201ENST00000300302 COL22A1Q8NFW1 1626 aaPredicted RBP20.07■□□□□ 0.8
HERPUD1-201ENST00000300302 TEFQ10587 303 aa20.07■□□□□ 0.8
HERPUD1-201ENST00000300302 SOS1Q07889 1333 aaPredicted RBP20.06■□□□□ 0.8
HERPUD1-201ENST00000300302 MVPQ14764 893 aaKnown RBP20.06■□□□□ 0.8
HERPUD1-201ENST00000300302 TOM1L2Q6ZVM7 507 aa20.06■□□□□ 0.8
HERPUD1-201ENST00000300302 LGR6Q9HBX8 967 aa20.06■□□□□ 0.8
HERPUD1-201ENST00000300302 TNNQ9UQP3 1299 aa20.05■□□□□ 0.8
HERPUD1-201ENST00000300302 MEGF6O75095 1541 aa20.05■□□□□ 0.8
HERPUD1-201ENST00000300302 RNMTO43148 476 aaKnown RBP20.05■□□□□ 0.8
HERPUD1-201ENST00000300302 EVA1CP58658 441 aa20.05■□□□□ 0.8
HERPUD1-201ENST00000300302 KRT24Q2M2I5 525 aa20.05■□□□□ 0.8
HERPUD1-201ENST00000300302 MPRIPQ6WCQ1 1025 aa20.05■□□□□ 0.8
HERPUD1-201ENST00000300302 NUTM2BA6NNL0 878 aaPredicted RBP20.03■□□□□ 0.8
HERPUD1-201ENST00000300302 NUTM2EB1AL46 878 aaPredicted RBP20.03■□□□□ 0.8
HERPUD1-201ENST00000300302 NUTM2AQ8IVF1 878 aaPredicted RBP20.03■□□□□ 0.8
HERPUD1-201ENST00000300302 DDX19BQ9UMR2 479 aa20.03■□□□□ 0.8
HERPUD1-201ENST00000300302 VIRMAQ69YN4 1812 aaKnown RBP20.02■□□□□ 0.8
HERPUD1-201ENST00000300302 ADAMTS2O95450 1211 aa20.02■□□□□ 0.8
HERPUD1-201ENST00000300302 IFNL2Q8IZJ0 200 aa20.02■□□□□ 0.8
HERPUD1-201ENST00000300302 CARD10Q9BWT7 1032 aa20.02■□□□□ 0.8
HERPUD1-201ENST00000300302 PKD1L3Q7Z443 1732 aa20.01■□□□□ 0.79
HERPUD1-201ENST00000300302 PARP4Q9UKK3 1724 aaKnown RBP20.01■□□□□ 0.79
HERPUD1-201ENST00000300302 TCERG1O14776 1098 aaKnown RBP20.01■□□□□ 0.79
HERPUD1-201ENST00000300302 CENPQQ7L2Z9 268 aaPredicted RBP20.01■□□□□ 0.79
HERPUD1-201ENST00000300302 API5Q9BZZ5 524 aaKnown RBP20.01■□□□□ 0.79
HERPUD1-201ENST00000300302 STRN4Q9NRL3 753 aa20.01■□□□□ 0.79
HERPUD1-201ENST00000300302 COL14A1Q05707 1796 aaKnown RBP20.01■□□□□ 0.79
HERPUD1-201ENST00000300302 ADAMTS7Q9UKP4 1686 aa20.01■□□□□ 0.79
HERPUD1-201ENST00000300302 BTBD11A6QL63 1104 aa20.01■□□□□ 0.79
HERPUD1-201ENST00000300302 PHKG2P15735 406 aa20.01■□□□□ 0.79
HERPUD1-201ENST00000300302 ITPRIPQ8IWB1 547 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms