RNA–Protein interactions for RNA: ENST00000298428.13

SEC61A2-201, Transcript of Sec61 translocon alpha 2 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61A2, Length 1,893 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2-201ENST00000298428 GNAT3A8MTJ3 354 aa24■■□□□ 1.43
SEC61A2-201ENST00000298428 HTATSF1O43719 755 aaKnown RBP24■■□□□ 1.43
SEC61A2-201ENST00000298428 ZNF853P0CG23 659 aa24■■□□□ 1.43
SEC61A2-201ENST00000298428 CFAP44Q96MT7 982 aa24■■□□□ 1.43
SEC61A2-201ENST00000298428 PLEKHO1Q53GL0 409 aaPredicted RBP24■■□□□ 1.43
SEC61A2-201ENST00000298428 EXOSC9Q06265 439 aaKnown RBP23.99■■□□□ 1.43
SEC61A2-201ENST00000298428 AMOTQ4VCS5 1084 aa23.99■■□□□ 1.43
SEC61A2-201ENST00000298428 WDR17Q8IZU2 1322 aa23.99■■□□□ 1.43
SEC61A2-201ENST00000298428 CT47B1P0C2W7 299 aaPredicted RBP23.98■■□□□ 1.43
SEC61A2-201ENST00000298428 RAPGEF4Q8WZA2 1011 aa23.98■■□□□ 1.43
SEC61A2-201ENST00000298428 MBIPQ9NS73 344 aa23.97■■□□□ 1.43
SEC61A2-201ENST00000298428 CRB1P82279 1406 aa23.96■■□□□ 1.43
SEC61A2-201ENST00000298428 ERICH6BQ5W0A0 696 aa23.96■■□□□ 1.43
SEC61A2-201ENST00000298428 ZNF530Q6P9A1 599 aaPredicted RBP23.95■■□□□ 1.42
SEC61A2-201ENST00000298428 LRRC37A3O60309 1634 aa23.95■■□□□ 1.42
SEC61A2-201ENST00000298428 COL14A1Q05707 1796 aaKnown RBP23.94■■□□□ 1.42
SEC61A2-201ENST00000298428 PLIN1O60240 522 aa23.94■■□□□ 1.42
SEC61A2-201ENST00000298428 TOM1L2Q6ZVM7 507 aa23.94■■□□□ 1.42
SEC61A2-201ENST00000298428 BCAR3O75815 825 aa23.94■■□□□ 1.42
SEC61A2-201ENST00000298428 TATP17735 454 aaPredicted RBP23.94■■□□□ 1.42
SEC61A2-201ENST00000298428 RARSP54136 660 aaKnown RBP23.94■■□□□ 1.42
SEC61A2-201ENST00000298428 STRN4Q9NRL3 753 aa23.94■■□□□ 1.42
SEC61A2-201ENST00000298428 MEGF6O75095 1541 aa23.93■■□□□ 1.42
SEC61A2-201ENST00000298428 EVA1CP58658 441 aa23.93■■□□□ 1.42
SEC61A2-201ENST00000298428 AKAP4Q5JQC9 854 aa23.93■■□□□ 1.42
SEC61A2-201ENST00000298428 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.93■■□□□ 1.42
SEC61A2-201ENST00000298428 PLEKHG2Q9H7P9 1386 aa23.92■■□□□ 1.42
SEC61A2-201ENST00000298428 CHL1O00533 1208 aa23.92■■□□□ 1.42
SEC61A2-201ENST00000298428 C1orf141Q5JVX7 400 aa23.92■■□□□ 1.42
SEC61A2-201ENST00000298428 IL17REQ8NFR9 667 aa23.92■■□□□ 1.42
SEC61A2-201ENST00000298428 BTG4Q9NY30 223 aa23.92■■□□□ 1.42
SEC61A2-201ENST00000298428 LARP1Q6PKG0 1096 aaKnown RBP23.9■■□□□ 1.42
SEC61A2-201ENST00000298428 CARD10Q9BWT7 1032 aa23.9■■□□□ 1.42
SEC61A2-201ENST00000298428 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.89■■□□□ 1.41
SEC61A2-201ENST00000298428 CEMIPQ8WUJ3 1361 aa23.89■■□□□ 1.41
SEC61A2-201ENST00000298428 SPG7Q9UQ90 795 aa23.88■■□□□ 1.41
SEC61A2-201ENST00000298428 ADAMTS2O95450 1211 aa23.87■■□□□ 1.41
SEC61A2-201ENST00000298428 BCL2L13Q9BXK5 485 aa23.87■■□□□ 1.41
SEC61A2-201ENST00000298428 TSPYL4Q9UJ04 414 aa23.87■■□□□ 1.41
SEC61A2-201ENST00000298428 OVOS2A0A0G2JMS6 1433 aa23.86■■□□□ 1.41
SEC61A2-201ENST00000298428 NUTM2BA6NNL0 878 aaPredicted RBP23.85■■□□□ 1.41
SEC61A2-201ENST00000298428 NUTM2EB1AL46 878 aaPredicted RBP23.85■■□□□ 1.41
SEC61A2-201ENST00000298428 NUTM2AQ8IVF1 878 aaPredicted RBP23.85■■□□□ 1.41
SEC61A2-201ENST00000298428 MIS18AQ9NYP9 233 aa23.85■■□□□ 1.41
SEC61A2-201ENST00000298428 PKD1L3Q7Z443 1732 aa23.85■■□□□ 1.41
SEC61A2-201ENST00000298428 PARP4Q9UKK3 1724 aaKnown RBP23.85■■□□□ 1.41
SEC61A2-201ENST00000298428 MPRIPQ6WCQ1 1025 aa23.85■■□□□ 1.41
SEC61A2-201ENST00000298428 TSPYL6Q8N831 410 aa23.85■■□□□ 1.41
SEC61A2-201ENST00000298428 ZNF428Q96B54 188 aa23.85■■□□□ 1.41
SEC61A2-201ENST00000298428 LGR6Q9HBX8 967 aa23.85■■□□□ 1.41
SEC61A2-201ENST00000298428 JCADQ9P266 1359 aa23.85■■□□□ 1.41
SEC61A2-201ENST00000298428 TWISTNBQ3B726 338 aaPredicted RBP23.84■■□□□ 1.41
SEC61A2-201ENST00000298428 C8orf58Q8NAV2 365 aa23.84■■□□□ 1.41
SEC61A2-201ENST00000298428 SMC4Q9NTJ3 1288 aa23.84■■□□□ 1.41
SEC61A2-201ENST00000298428 PLCH1Q4KWH8 1693 aa23.84■■□□□ 1.41
SEC61A2-201ENST00000298428 VAMP4O75379 141 aa23.83■■□□□ 1.41
SEC61A2-201ENST00000298428 CANXP27824 592 aaKnown RBP23.83■■□□□ 1.41
SEC61A2-201ENST00000298428 TAF7Q15545 349 aaPredicted RBP23.83■■□□□ 1.41
SEC61A2-201ENST00000298428 C20orf194Q5TEA3 1177 aa23.83■■□□□ 1.41
SEC61A2-201ENST00000298428 SSH1Q8WYL5 1049 aa23.83■■□□□ 1.41
SEC61A2-201ENST00000298428 ELL2O00472 640 aaPredicted RBP23.83■■□□□ 1.4
SEC61A2-201ENST00000298428 RNMTO43148 476 aaKnown RBP23.83■■□□□ 1.4
SEC61A2-201ENST00000298428 BABAM1Q9NWV8 329 aa23.83■■□□□ 1.4
SEC61A2-201ENST00000298428 IL2RBP14784 551 aa23.82■■□□□ 1.4
SEC61A2-201ENST00000298428 ALDH1L2Q3SY69 923 aa23.82■■□□□ 1.4
SEC61A2-201ENST00000298428 FRAT1Q92837 279 aaPredicted RBP23.82■■□□□ 1.4
SEC61A2-201ENST00000298428 PPP4R2Q9NY27 417 aa23.82■■□□□ 1.4
SEC61A2-201ENST00000298428 PHKG2P15735 406 aa23.81■■□□□ 1.4
SEC61A2-201ENST00000298428 TEFQ10587 303 aa23.81■■□□□ 1.4
SEC61A2-201ENST00000298428 IFNL2Q8IZJ0 200 aa23.81■■□□□ 1.4
SEC61A2-201ENST00000298428 VIRMAQ69YN4 1812 aaKnown RBP23.81■■□□□ 1.4
SEC61A2-201ENST00000298428 EXOC6Q8TAG9 804 aa23.8■■□□□ 1.4
SEC61A2-201ENST00000298428 USP35Q9P2H5 1018 aa23.8■■□□□ 1.4
SEC61A2-201ENST00000298428 ADAMTS7Q9UKP4 1686 aa23.8■■□□□ 1.4
SEC61A2-201ENST00000298428 KRT24Q2M2I5 525 aa23.79■■□□□ 1.4
SEC61A2-201ENST00000298428 CRBNQ96SW2 442 aa23.79■■□□□ 1.4
SEC61A2-201ENST00000298428 CYP27B1O15528 508 aa23.78■■□□□ 1.4
SEC61A2-201ENST00000298428 ZCRB1Q8TBF4 217 aaKnown RBP23.77■■□□□ 1.4
SEC61A2-201ENST00000298428 NRAPQ86VF7 1730 aa23.77■■□□□ 1.4
SEC61A2-201ENST00000298428 PDE3AQ14432 1141 aa23.77■■□□□ 1.4
SEC61A2-201ENST00000298428 PCDH11XQ9BZA7 1347 aa23.77■■□□□ 1.4
SEC61A2-201ENST00000298428 PCDH11YQ9BZA8 1340 aa23.77■■□□□ 1.4
SEC61A2-201ENST00000298428 KDM6AO15550 1401 aaPredicted RBP23.76■■□□□ 1.39
SEC61A2-201ENST00000298428 KIF16BQ96L93 1317 aa23.75■■□□□ 1.39
SEC61A2-201ENST00000298428 HSP90AB1P08238 724 aaKnown RBP23.75■■□□□ 1.39
SEC61A2-201ENST00000298428 SCN11AQ9UI33 1791 aa23.75■■□□□ 1.39
SEC61A2-201ENST00000298428 ZKSCAN2Q63HK3 967 aa23.75■■□□□ 1.39
SEC61A2-201ENST00000298428 NWD2Q9ULI1 1742 aa23.74■■□□□ 1.39
SEC61A2-201ENST00000298428 BTBD11A6QL63 1104 aa23.74■■□□□ 1.39
SEC61A2-201ENST00000298428 BRPF1P55201 1214 aaPredicted RBP23.74■■□□□ 1.39
SEC61A2-201ENST00000298428 DCAF5Q96JK2 942 aa23.74■■□□□ 1.39
SEC61A2-201ENST00000298428 KDM3BQ7LBC6 1761 aa23.74■■□□□ 1.39
SEC61A2-201ENST00000298428 SLIT2O94813 1529 aa23.74■■□□□ 1.39
SEC61A2-201ENST00000298428 SPATA31A6Q5VVP1 1343 aa23.73■■□□□ 1.39
SEC61A2-201ENST00000298428 HSPA1LP34931 641 aa23.73■■□□□ 1.39
SEC61A2-201ENST00000298428 MRPL50Q8N5N7 158 aaKnown RBP23.73■■□□□ 1.39
SEC61A2-201ENST00000298428 NOB1Q9ULX3 412 aaKnown RBP23.73■■□□□ 1.39
SEC61A2-201ENST00000298428 SIPA1L3O60292 1781 aaPredicted RBP23.72■■□□□ 1.39
SEC61A2-201ENST00000298428 DISP2A7MBM2 1401 aa23.72■■□□□ 1.39
SEC61A2-201ENST00000298428 SHANK3Q9BYB0 1731 aa23.71■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms