RNA–Protein interactions for RNA: ENST00000298274.12

PCDH11X-201, Transcript of protocadherin 11 X-linked, humanhuman

TSL 1 (best)

Gene PCDH11X, Length 4,767 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-201ENST00000298274 THRAP3Q9Y2W1 955 aaKnown RBP14.9□□□□□ -0.02
PCDH11X-201ENST00000298274 BLMP54132 1417 aaPredicted RBP14.9□□□□□ -0.02
PCDH11X-201ENST00000298274 USP31Q70CQ4 1352 aa14.9□□□□□ -0.02
PCDH11X-201ENST00000298274 SPATA31A6Q5VVP1 1343 aa14.89□□□□□ -0.03
PCDH11X-201ENST00000298274 SPATA31A3Q5VYP0 1347 aa14.89□□□□□ -0.03
PCDH11X-201ENST00000298274 HYPKQ9NX55 129 aa14.89□□□□□ -0.03
PCDH11X-201ENST00000298274 MAP3K5Q99683 1374 aa14.89□□□□□ -0.03
PCDH11X-201ENST00000298274 KDM4FA0A1W2PPD8 638 aa14.89□□□□□ -0.03
PCDH11X-201ENST00000298274 TRPC5Q9UL62 973 aaPredicted RBP14.89□□□□□ -0.03
PCDH11X-201ENST00000298274 JCADQ9P266 1359 aa14.89□□□□□ -0.03
PCDH11X-201ENST00000298274 CHRNA2Q15822 529 aa14.88□□□□□ -0.03
PCDH11X-201ENST00000298274 C1orf167Q5SNV9 1468 aa14.88□□□□□ -0.03
PCDH11X-201ENST00000298274 BRINP3Q76B58 766 aa14.88□□□□□ -0.03
PCDH11X-201ENST00000298274 ERC1Q8IUD2 1116 aa14.88□□□□□ -0.03
PCDH11X-201ENST00000298274 HSP90AB2PQ58FF8 381 aa14.87□□□□□ -0.03
PCDH11X-201ENST00000298274 BTG4Q9NY30 223 aa14.87□□□□□ -0.03
PCDH11X-201ENST00000298274 ELL2O00472 640 aaPredicted RBP14.87□□□□□ -0.03
PCDH11X-201ENST00000298274 EXOSC9Q06265 439 aaKnown RBP14.87□□□□□ -0.03
PCDH11X-201ENST00000298274 CENPQQ7L2Z9 268 aaPredicted RBP14.86□□□□□ -0.03
PCDH11X-201ENST00000298274 UBTFL1P0CB47 393 aaPredicted RBP14.86□□□□□ -0.03
PCDH11X-201ENST00000298274 SLFN5Q08AF3 891 aa14.86□□□□□ -0.03
PCDH11X-201ENST00000298274 CDK12Q9NYV4 1490 aaPredicted RBP14.85□□□□□ -0.03
PCDH11X-201ENST00000298274 SNRPA1P09661 255 aaKnown RBP14.85□□□□□ -0.03
PCDH11X-201ENST00000298274 PTPRCP08575 1304 aa14.85□□□□□ -0.03
PCDH11X-201ENST00000298274 IQGAP1P46940 1657 aa14.85□□□□□ -0.03
PCDH11X-201ENST00000298274 HOXB7P09629 217 aa14.85□□□□□ -0.03
PCDH11X-201ENST00000298274 LARP1Q6PKG0 1096 aaKnown RBP14.85□□□□□ -0.03
PCDH11X-201ENST00000298274 DBF4Q9UBU7 674 aaPredicted RBP14.85□□□□□ -0.03
PCDH11X-201ENST00000298274 G3BP1Q13283 466 aaKnown RBP eCLIP14.85□□□□□ -0.03
PCDH11X-201ENST00000298274 CHMP4CQ96CF2 233 aa14.85□□□□□ -0.03
PCDH11X-201ENST00000298274 USP21Q9UK80 565 aa14.85□□□□□ -0.03
PCDH11X-201ENST00000298274 KIAA1211Q6ZU35 1233 aa14.85□□□□□ -0.03
PCDH11X-201ENST00000298274 CARD10Q9BWT7 1032 aa14.84□□□□□ -0.03
PCDH11X-201ENST00000298274 ADAMTSL3P82987 1691 aa14.84□□□□□ -0.03
PCDH11X-201ENST00000298274 SRCIN1Q9C0H9 1055 aa14.84□□□□□ -0.03
PCDH11X-201ENST00000298274 UBR1Q8IWV7 1749 aa14.84□□□□□ -0.03
PCDH11X-201ENST00000298274 IRX6P78412 446 aaPredicted RBP14.84□□□□□ -0.03
PCDH11X-201ENST00000298274 IL13P35225 146 aa14.83□□□□□ -0.03
PCDH11X-201ENST00000298274 SENP3-EIF4A1A0A087X0R7 540 aa14.83□□□□□ -0.04
PCDH11X-201ENST00000298274 ARHGEF25Q86VW2 580 aa14.83□□□□□ -0.04
PCDH11X-201ENST00000298274 PRR36Q9H6K5 1346 aa14.83□□□□□ -0.04
PCDH11X-201ENST00000298274 EYA1Q99502 592 aa14.83□□□□□ -0.04
PCDH11X-201ENST00000298274 RTL5Q5HYW3 569 aaPredicted RBP14.82□□□□□ -0.04
PCDH11X-201ENST00000298274 ZPR1O75312 459 aa14.82□□□□□ -0.04
PCDH11X-201ENST00000298274 KCNJ4P48050 445 aa14.82□□□□□ -0.04
PCDH11X-201ENST00000298274 TCERG1O14776 1098 aaKnown RBP14.82□□□□□ -0.04
PCDH11X-201ENST00000298274 DUSP27Q5VZP5 1158 aa14.82□□□□□ -0.04
PCDH11X-201ENST00000298274 ADGRB1O14514 1584 aa14.81□□□□□ -0.04
PCDH11X-201ENST00000298274 NOL10Q9BSC4 688 aaKnown RBP14.81□□□□□ -0.04
PCDH11X-201ENST00000298274 ERVV-2B6SEH9 535 aa14.81□□□□□ -0.04
PCDH11X-201ENST00000298274 NBPF14Q5TI25 921 aa14.81□□□□□ -0.04
PCDH11X-201ENST00000298274 SLC4A2P04920 1241 aa14.81□□□□□ -0.04
PCDH11X-201ENST00000298274 USHBP1Q8N6Y0 703 aa14.81□□□□□ -0.04
PCDH11X-201ENST00000298274 CLUAP1Q96AJ1 413 aa14.8□□□□□ -0.04
PCDH11X-201ENST00000298274 AK7Q96M32 723 aa14.8□□□□□ -0.04
PCDH11X-201ENST00000298274 WDR17Q8IZU2 1322 aa14.8□□□□□ -0.04
PCDH11X-201ENST00000298274 CABLES1Q8TDN4 633 aa14.8□□□□□ -0.04
PCDH11X-201ENST00000298274 ITSN1Q15811 1721 aa14.8□□□□□ -0.04
PCDH11X-201ENST00000298274 GNAI2P04899 355 aa14.8□□□□□ -0.04
PCDH11X-201ENST00000298274 ERC2O15083 957 aa14.79□□□□□ -0.04
PCDH11X-201ENST00000298274 ATF7IPQ6VMQ6 1270 aa14.78□□□□□ -0.04
PCDH11X-201ENST00000298274 MPRIPQ6WCQ1 1025 aa14.78□□□□□ -0.04
PCDH11X-201ENST00000298274 ARHGAP45Q92619 1136 aa14.78□□□□□ -0.04
PCDH11X-201ENST00000298274 RSPH6AQ9H0K4 717 aa14.78□□□□□ -0.04
PCDH11X-201ENST00000298274 PTPRUQ92729 1446 aa14.78□□□□□ -0.04
PCDH11X-201ENST00000298274 FRAT2O75474 233 aaPredicted RBP14.78□□□□□ -0.04
PCDH11X-201ENST00000298274 AIMP1Q12904 312 aaKnown RBP14.78□□□□□ -0.04
PCDH11X-201ENST00000298274 RUFY2Q8WXA3 655 aa14.78□□□□□ -0.04
PCDH11X-201ENST00000298274 CPSF1Q10570 1443 aaKnown RBP14.78□□□□□ -0.04
PCDH11X-201ENST00000298274 KIF1AQ12756 1690 aa14.77□□□□□ -0.04
PCDH11X-201ENST00000298274 USP32Q8NFA0 1604 aa14.77□□□□□ -0.04
PCDH11X-201ENST00000298274 RNMTO43148 476 aaKnown RBP14.77□□□□□ -0.05
PCDH11X-201ENST00000298274 AMOTL1Q8IY63 956 aa14.77□□□□□ -0.05
PCDH11X-201ENST00000298274 NCAPD2Q15021 1401 aa14.77□□□□□ -0.05
PCDH11X-201ENST00000298274 MCM10Q7L590 875 aa14.77□□□□□ -0.05
PCDH11X-201ENST00000298274 UNC5CLQ8IV45 518 aa14.77□□□□□ -0.05
PCDH11X-201ENST00000298274 ZRANB1Q9UGI0 708 aa14.76□□□□□ -0.05
PCDH11X-201ENST00000298274 IFIT2P09913 472 aaKnown RBP14.76□□□□□ -0.05
PCDH11X-201ENST00000298274 GCC1Q96CN9 775 aa14.76□□□□□ -0.05
PCDH11X-201ENST00000298274 GNL3LQ9NVN8 582 aaKnown RBP14.76□□□□□ -0.05
PCDH11X-201ENST00000298274 FANCIQ9NVI1 1328 aa14.76□□□□□ -0.05
PCDH11X-201ENST00000298274 FLAD1Q8NFF5 587 aa14.76□□□□□ -0.05
PCDH11X-201ENST00000298274 KIAA0232Q92628 1395 aa14.75□□□□□ -0.05
PCDH11X-201ENST00000298274 ERBB4Q15303 1308 aa14.75□□□□□ -0.05
PCDH11X-201ENST00000298274 RPAP2Q8IXW5 612 aaPredicted RBP14.75□□□□□ -0.05
PCDH11X-201ENST00000298274 PPP1R42Q7Z4L9 355 aa14.74□□□□□ -0.05
PCDH11X-201ENST00000298274 NECTIN2Q92692 538 aa14.74□□□□□ -0.05
PCDH11X-201ENST00000298274 BCL2L13Q9BXK5 485 aa14.74□□□□□ -0.05
PCDH11X-201ENST00000298274 IGSF1Q8N6C5 1336 aa14.74□□□□□ -0.05
PCDH11X-201ENST00000298274 ZNF142P52746 1687 aaPredicted RBP14.74□□□□□ -0.05
PCDH11X-201ENST00000298274 VPS37DQ86XT2 251 aa14.74□□□□□ -0.05
PCDH11X-201ENST00000298274 MTHFSDQ2M296 383 aaKnown RBP14.74□□□□□ -0.05
PCDH11X-201ENST00000298274 RGS3P49796 1198 aa14.73□□□□□ -0.05
PCDH11X-201ENST00000298274 COG6Q9Y2V7 657 aa14.73□□□□□ -0.05
PCDH11X-201ENST00000298274 PLEKHG2Q9H7P9 1386 aa14.73□□□□□ -0.05
PCDH11X-201ENST00000298274 MFAP1P55081 439 aaKnown RBP14.73□□□□□ -0.05
PCDH11X-201ENST00000298274 TSR2Q969E8 191 aaKnown RBP14.73□□□□□ -0.05
PCDH11X-201ENST00000298274 FGD1P98174 961 aa14.72□□□□□ -0.05
PCDH11X-201ENST00000298274 NYXQ9GZU5 481 aa14.72□□□□□ -0.05
PCDH11X-201ENST00000298274 HIP1O00291 1037 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms