RNA–Protein interactions for RNA: ENST00000297518.4

CDK5-201, Transcript of cyclin dependent kinase 5, humanhuman

TSL 1 (best) BASIC

Gene CDK5, Length 783 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5-201ENST00000297518 EZH2Q15910 746 aaKnown RBP16.31■□□□□ 0.2
CDK5-201ENST00000297518 CC2D1BQ5T0F9 858 aaKnown RBP16.31■□□□□ 0.2
CDK5-201ENST00000297518 ZCRB1Q8TBF4 217 aaKnown RBP16.31■□□□□ 0.2
CDK5-201ENST00000297518 DDX54Q8TDD1 881 aaKnown RBP16.31■□□□□ 0.2
CDK5-201ENST00000297518 CAMKK2Q96RR4 588 aa16.31■□□□□ 0.2
CDK5-201ENST00000297518 EYA1Q99502 592 aa16.3■□□□□ 0.2
CDK5-201ENST00000297518 PKD1L3Q7Z443 1732 aa16.29■□□□□ 0.2
CDK5-201ENST00000297518 PTF1AQ7RTS3 328 aa16.29■□□□□ 0.2
CDK5-201ENST00000297518 NUP188Q5SRE5 1749 aa16.28■□□□□ 0.2
CDK5-201ENST00000297518 ACSBG1Q96GR2 724 aa16.28■□□□□ 0.2
CDK5-201ENST00000297518 DOT1LQ8TEK3 1739 aa16.28■□□□□ 0.2
CDK5-201ENST00000297518 KAT6BQ8WYB5 2073 aa16.27■□□□□ 0.2
CDK5-201ENST00000297518 KCNQ2O43526 872 aa16.27■□□□□ 0.2
CDK5-201ENST00000297518 BTAF1O14981 1849 aa16.26■□□□□ 0.19
CDK5-201ENST00000297518 IGSF1Q8N6C5 1336 aa16.26■□□□□ 0.19
CDK5-201ENST00000297518 PCDH11XQ9BZA7 1347 aa16.26■□□□□ 0.19
CDK5-201ENST00000297518 PCDH11YQ9BZA8 1340 aa16.26■□□□□ 0.19
CDK5-201ENST00000297518 PLSCR1O15162 318 aa16.26■□□□□ 0.19
CDK5-201ENST00000297518 CNGB1Q14028 1251 aaPredicted RBP16.26■□□□□ 0.19
CDK5-201ENST00000297518 MTHFSP49914 203 aa16.25■□□□□ 0.19
CDK5-201ENST00000297518 PLEKHG2Q9H7P9 1386 aa16.25■□□□□ 0.19
CDK5-201ENST00000297518 ZEB1P37275 1124 aaPredicted RBP16.24■□□□□ 0.19
CDK5-201ENST00000297518 SPG7Q9UQ90 795 aa16.23■□□□□ 0.19
CDK5-201ENST00000297518 CYP27B1O15528 508 aa16.22■□□□□ 0.19
CDK5-201ENST00000297518 IL13P35225 146 aa16.22■□□□□ 0.19
CDK5-201ENST00000297518 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.22■□□□□ 0.19
CDK5-201ENST00000297518 TOGARAM1Q9Y4F4 1720 aa16.2■□□□□ 0.18
CDK5-201ENST00000297518 PSDA5PKW4 1024 aaPredicted RBP16.2■□□□□ 0.18
CDK5-201ENST00000297518 PRIM1P49642 420 aaKnown RBP16.2■□□□□ 0.18
CDK5-201ENST00000297518 SYTL4Q96C24 671 aaPredicted RBP16.2■□□□□ 0.18
CDK5-201ENST00000297518 COL3A1P02461 1466 aaPredicted RBP16.2■□□□□ 0.18
CDK5-201ENST00000297518 KDRP35968 1356 aa16.19■□□□□ 0.18
CDK5-201ENST00000297518 R3HDM1Q15032 1099 aaKnown RBP16.19■□□□□ 0.18
CDK5-201ENST00000297518 TXNRD1Q16881 649 aa16.19■□□□□ 0.18
CDK5-201ENST00000297518 NBPF14Q5TI25 921 aa16.19■□□□□ 0.18
CDK5-201ENST00000297518 AEBP1Q8IUX7 1158 aa16.19■□□□□ 0.18
CDK5-201ENST00000297518 PROM2Q8N271 834 aa16.19■□□□□ 0.18
CDK5-201ENST00000297518 DIAPH1O60610 1272 aaKnown RBP16.18■□□□□ 0.18
CDK5-201ENST00000297518 SULT6B1Q6IMI4 303 aa16.18■□□□□ 0.18
CDK5-201ENST00000297518 NKX1-1Q15270 411 aaPredicted RBP16.17■□□□□ 0.18
CDK5-201ENST00000297518 IFNL2Q8IZJ0 200 aa16.17■□□□□ 0.18
CDK5-201ENST00000297518 ITGB4P16144 1822 aa16.17■□□□□ 0.18
CDK5-201ENST00000297518 PHKG2P15735 406 aa16.16■□□□□ 0.18
CDK5-201ENST00000297518 PLEKHO1Q53GL0 409 aaPredicted RBP16.16■□□□□ 0.18
CDK5-201ENST00000297518 LY75O60449 1722 aa16.16■□□□□ 0.18
CDK5-201ENST00000297518 PPP2R1AP30153 589 aa16.15■□□□□ 0.18
CDK5-201ENST00000297518 AMOTQ4VCS5 1084 aa16.15■□□□□ 0.18
CDK5-201ENST00000297518 ANO8Q9HCE9 1232 aaPredicted RBP16.15■□□□□ 0.18
CDK5-201ENST00000297518 ZNF530Q6P9A1 599 aaPredicted RBP16.14■□□□□ 0.17
CDK5-201ENST00000297518 CFAP53Q96M91 514 aa16.14■□□□□ 0.17
CDK5-201ENST00000297518 PAPPAQ13219 1627 aa16.14■□□□□ 0.17
CDK5-201ENST00000297518 HMOX1P09601 288 aa16.13■□□□□ 0.17
CDK5-201ENST00000297518 DDX10Q13206 875 aaKnown RBP16.13■□□□□ 0.17
CDK5-201ENST00000297518 LRP5O75197 1615 aa16.12■□□□□ 0.17
CDK5-201ENST00000297518 SLC27A3Q5K4L6 730 aa16.12■□□□□ 0.17
CDK5-201ENST00000297518 MPRIPQ6WCQ1 1025 aa16.12■□□□□ 0.17
CDK5-201ENST00000297518 SRCAPQ6ZRS2 3230 aa16.12■□□□□ 0.17
CDK5-201ENST00000297518 U2SURPO15042 1029 aaKnown RBP16.11■□□□□ 0.17
CDK5-201ENST00000297518 HSP90AB1P08238 724 aaKnown RBP16.11■□□□□ 0.17
CDK5-201ENST00000297518 C1orf141Q5JVX7 400 aa16.11■□□□□ 0.17
CDK5-201ENST00000297518 LRRC4BQ9NT99 713 aa16.11■□□□□ 0.17
CDK5-201ENST00000297518 STK32BQ9NY57 414 aa16.11■□□□□ 0.17
CDK5-201ENST00000297518 DCAF5Q96JK2 942 aa16.1■□□□□ 0.17
CDK5-201ENST00000297518 CASZ1Q86V15 1759 aa16.09■□□□□ 0.17
CDK5-201ENST00000297518 SLC15A2Q16348 729 aa16.09■□□□□ 0.17
CDK5-201ENST00000297518 PIGBQ92521 554 aa16.09■□□□□ 0.17
CDK5-201ENST00000297518 TMOD3Q9NYL9 352 aa16.09■□□□□ 0.17
CDK5-201ENST00000297518 PALLDQ8WX93 1383 aa16.09■□□□□ 0.17
CDK5-201ENST00000297518 KDM6AO15550 1401 aaPredicted RBP16.09■□□□□ 0.17
CDK5-201ENST00000297518 SMARCC1Q92922 1105 aaPredicted RBP16.08■□□□□ 0.16
CDK5-201ENST00000297518 CCNL1Q9UK58 526 aaPredicted RBP16.08■□□□□ 0.16
CDK5-201ENST00000297518 NUDCQ9Y266 331 aa16.08■□□□□ 0.16
CDK5-201ENST00000297518 ERVV-2B6SEH9 535 aa16.07■□□□□ 0.16
CDK5-201ENST00000297518 SCN11AQ9UI33 1791 aa16.07■□□□□ 0.16
CDK5-201ENST00000297518 C5P01031 1676 aa16.06■□□□□ 0.16
CDK5-201ENST00000297518 KCNQ4P56696 695 aa16.06■□□□□ 0.16
CDK5-201ENST00000297518 RALBP1Q15311 655 aa16.06■□□□□ 0.16
CDK5-201ENST00000297518 ZNF827Q17R98 1081 aa16.06■□□□□ 0.16
CDK5-201ENST00000297518 AKAP4Q5JQC9 854 aa16.06■□□□□ 0.16
CDK5-201ENST00000297518 QSER1Q2KHR3 1735 aa16.05■□□□□ 0.16
CDK5-201ENST00000297518 VIRMAQ69YN4 1812 aaKnown RBP16.05■□□□□ 0.16
CDK5-201ENST00000297518 TAF1LQ8IZX4 1826 aa16.05■□□□□ 0.16
CDK5-201ENST00000297518 TUBGCP6Q96RT7 1819 aa16.04■□□□□ 0.16
CDK5-201ENST00000297518 CABP4P57796 275 aa16.04■□□□□ 0.16
CDK5-201ENST00000297518 MTHFSDQ2M296 383 aaKnown RBP16.04■□□□□ 0.16
CDK5-201ENST00000297518 AKT1S1Q96B36 256 aa16.04■□□□□ 0.16
CDK5-201ENST00000297518 ASAP1Q9ULH1 1129 aa16.04■□□□□ 0.16
CDK5-201ENST00000297518 ADAMTS7Q9UKP4 1686 aa16.03■□□□□ 0.16
CDK5-201ENST00000297518 U2AF1L5P0DN76 240 aaPredicted RBP16.03■□□□□ 0.16
CDK5-201ENST00000297518 U2AF1Q01081 240 aaKnown RBP eCLIP16.03■□□□□ 0.16
CDK5-201ENST00000297518 RSPH6AQ9H0K4 717 aa16.03■□□□□ 0.16
CDK5-201ENST00000297518 HMGB2P26583 209 aaKnown RBP16.02■□□□□ 0.16
CDK5-201ENST00000297518 PRKAR2BP31323 418 aa16.02■□□□□ 0.16
CDK5-201ENST00000297518 PDGFDQ9GZP0 370 aaPredicted RBP16.02■□□□□ 0.16
CDK5-201ENST00000297518 ATG3Q9NT62 314 aa16.02■□□□□ 0.16
CDK5-201ENST00000297518 MRC1P22897 1456 aa16.02■□□□□ 0.15
CDK5-201ENST00000297518 GAS2L2Q8NHY3 880 aa16.01■□□□□ 0.15
CDK5-201ENST00000297518 SPON1Q9HCB6 807 aa16.01■□□□□ 0.15
CDK5-201ENST00000297518 MAP3K5Q99683 1374 aa16■□□□□ 0.15
CDK5-201ENST00000297518 C4BP0C0L5 1744 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms