RNA–Protein interactions for RNA: ENST00000297157.7

RP9-201, Transcript of RP9, pre-mRNA splicing factor, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RP9, Length 1,121 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RP9-201ENST00000297157 QSER1Q2KHR3 1735 aa35.48■■■■□ 3.27
RP9-201ENST00000297157 UTRNP46939 3433 aa35.45■■■■□ 3.27
RP9-201ENST00000297157 FYB1O15117 783 aa35.45■■■■□ 3.27
RP9-201ENST00000297157 NSD2O96028 1365 aa35.43■■■■□ 3.26
RP9-201ENST00000297157 SLC27A3Q5K4L6 730 aa35.43■■■■□ 3.26
RP9-201ENST00000297157 KIF20BQ96Q89 1820 aa35.42■■■■□ 3.26
RP9-201ENST00000297157 AKT1S1Q96B36 256 aa35.42■■■■□ 3.26
RP9-201ENST00000297157 CARD14Q9BXL6 1004 aa35.42■■■■□ 3.26
RP9-201ENST00000297157 FHDC1Q9C0D6 1143 aaPredicted RBP35.42■■■■□ 3.26
RP9-201ENST00000297157 LY75O60449 1722 aa35.42■■■■□ 3.26
RP9-201ENST00000297157 RRS1Q15050 365 aaKnown RBP35.41■■■■□ 3.26
RP9-201ENST00000297157 SYT17Q9BSW7 474 aa35.41■■■■□ 3.26
RP9-201ENST00000297157 ZCRB1Q8TBF4 217 aaKnown RBP35.4■■■■□ 3.26
RP9-201ENST00000297157 GGNBP2Q9H3C7 697 aa35.4■■■■□ 3.26
RP9-201ENST00000297157 MAP3K5Q99683 1374 aa35.38■■■■□ 3.26
RP9-201ENST00000297157 COL24A1Q17RW2 1714 aa35.38■■■■□ 3.25
RP9-201ENST00000297157 NBPF6Q5VWK0 638 aa35.38■■■■□ 3.25
RP9-201ENST00000297157 NBPF4Q96M43 638 aa35.38■■■■□ 3.25
RP9-201ENST00000297157 PRIM1P49642 420 aaKnown RBP35.37■■■■□ 3.25
RP9-201ENST00000297157 TUBGCP6Q96RT7 1819 aa35.36■■■■□ 3.25
RP9-201ENST00000297157 SMG6Q86US8 1419 aaKnown RBP35.36■■■■□ 3.25
RP9-201ENST00000297157 CGNL1Q0VF96 1302 aa35.35■■■■□ 3.25
RP9-201ENST00000297157 ARXQ96QS3 562 aa35.35■■■■□ 3.25
RP9-201ENST00000297157 KIF24Q5T7B8 1368 aa35.35■■■■□ 3.25
RP9-201ENST00000297157 INSRP06213 1382 aa35.34■■■■□ 3.25
RP9-201ENST00000297157 SYTL4Q96C24 671 aaPredicted RBP35.33■■■■□ 3.25
RP9-201ENST00000297157 SLC16A10Q8TF71 515 aa35.32■■■■□ 3.24
RP9-201ENST00000297157 FLT4P35916 1363 aa35.31■■■■□ 3.24
RP9-201ENST00000297157 NSD3Q9BZ95 1437 aa35.31■■■■□ 3.24
RP9-201ENST00000297157 PNPLA7Q6ZV29 1317 aa35.31■■■■□ 3.24
RP9-201ENST00000297157 USHBP1Q8N6Y0 703 aa35.29■■■■□ 3.24
RP9-201ENST00000297157 HSP90AB2PQ58FF8 381 aa35.28■■■■□ 3.24
RP9-201ENST00000297157 KCNQ4P56696 695 aa35.27■■■■□ 3.24
RP9-201ENST00000297157 RAPGEF4Q8WZA2 1011 aa35.27■■■■□ 3.24
RP9-201ENST00000297157 ANKRD26Q9UPS8 1709 aa35.25■■■■□ 3.23
RP9-201ENST00000297157 TFCP2L1Q9NZI6 479 aa35.23■■■■□ 3.23
RP9-201ENST00000297157 NCAPD2Q15021 1401 aa35.23■■■■□ 3.23
RP9-201ENST00000297157 TATP17735 454 aaPredicted RBP35.22■■■■□ 3.23
RP9-201ENST00000297157 CCNL1Q9UK58 526 aaPredicted RBP35.22■■■■□ 3.23
RP9-201ENST00000297157 CHD4Q14839 1912 aa35.21■■■■□ 3.23
RP9-201ENST00000297157 KIF7Q2M1P5 1343 aa35.21■■■■□ 3.23
RP9-201ENST00000297157 PCDH11XQ9BZA7 1347 aa35.21■■■■□ 3.23
RP9-201ENST00000297157 PCDH11YQ9BZA8 1340 aa35.21■■■■□ 3.23
RP9-201ENST00000297157 PKD1L3Q7Z443 1732 aa35.2■■■■□ 3.23
RP9-201ENST00000297157 TOGARAM1Q9Y4F4 1720 aa35.18■■■■□ 3.22
RP9-201ENST00000297157 POLD1P28340 1107 aa35.17■■■■□ 3.22
RP9-201ENST00000297157 PANK3Q9H999 370 aa35.17■■■■□ 3.22
RP9-201ENST00000297157 EMILIN1Q9Y6C2 1016 aa35.17■■■■□ 3.22
RP9-201ENST00000297157 C5P01031 1676 aa35.17■■■■□ 3.22
RP9-201ENST00000297157 POLR3GLQ9BT43 218 aa35.16■■■■□ 3.22
RP9-201ENST00000297157 ZNF784Q8NCA9 323 aaPredicted RBP35.14■■■■□ 3.22
RP9-201ENST00000297157 GOLGB1Q14789 3259 aaKnown RBP35.13■■■■□ 3.21
RP9-201ENST00000297157 CYP27B1O15528 508 aa35.13■■■■□ 3.21
RP9-201ENST00000297157 TAF1LQ8IZX4 1826 aa35.11■■■■□ 3.21
RP9-201ENST00000297157 ITGB4P16144 1822 aa35.1■■■■□ 3.21
RP9-201ENST00000297157 PALLDQ8WX93 1383 aa35.1■■■■□ 3.21
RP9-201ENST00000297157 COL23A1Q86Y22 540 aaPredicted RBP35.09■■■■□ 3.21
RP9-201ENST00000297157 WASHC2AQ641Q2 1341 aa35.07■■■■□ 3.21
RP9-201ENST00000297157 MAP2P11137 1827 aaKnown RBP35.07■■■■□ 3.2
RP9-201ENST00000297157 NKX1-1Q15270 411 aaPredicted RBP35.04■■■■□ 3.2
RP9-201ENST00000297157 MPRIPQ6WCQ1 1025 aa35.04■■■■□ 3.2
RP9-201ENST00000297157 KLHL34Q8N239 644 aa35.04■■■■□ 3.2
RP9-201ENST00000297157 HMGB2P26583 209 aaKnown RBP35.03■■■■□ 3.2
RP9-201ENST00000297157 GPR162Q16538 588 aa35.03■■■■□ 3.2
RP9-201ENST00000297157 C4BP0C0L5 1744 aa35.02■■■■□ 3.2
RP9-201ENST00000297157 NLGN2Q8NFZ4 835 aa35.02■■■■□ 3.2
RP9-201ENST00000297157 PPM1GO15355 546 aaPredicted RBP35■■■■□ 3.19
RP9-201ENST00000297157 PER1O15534 1290 aaPredicted RBP35■■■■□ 3.19
RP9-201ENST00000297157 POLKQ9UBT6 870 aa35■■■■□ 3.19
RP9-201ENST00000297157 SMARCC1Q92922 1105 aaPredicted RBP34.99■■■■□ 3.19
RP9-201ENST00000297157 EYA1Q99502 592 aa34.99■■■■□ 3.19
RP9-201ENST00000297157 MSH5O43196 834 aa34.98■■■■□ 3.19
RP9-201ENST00000297157 AMER1Q5JTC6 1135 aaPredicted RBP34.98■■■■□ 3.19
RP9-201ENST00000297157 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP34.98■■■■□ 3.19
RP9-201ENST00000297157 SPG7Q9UQ90 795 aa34.98■■■■□ 3.19
RP9-201ENST00000297157 FLAD1Q8NFF5 587 aa34.97■■■■□ 3.19
RP9-201ENST00000297157 PIGBQ92521 554 aa34.97■■■■□ 3.19
RP9-201ENST00000297157 UBR3Q6ZT12 1888 aa34.95■■■■□ 3.19
RP9-201ENST00000297157 PLEKHG2Q9H7P9 1386 aa34.95■■■■□ 3.19
RP9-201ENST00000297157 MSL1Q68DK7 614 aa34.94■■■■□ 3.18
RP9-201ENST00000297157 KNSTRNQ9Y448 316 aa34.93■■■■□ 3.18
RP9-201ENST00000297157 AMIGO3Q86WK7 504 aa34.9■■■■□ 3.18
RP9-201ENST00000297157 EIF4A2Q14240 407 aaKnown RBP34.89■■■■□ 3.18
RP9-201ENST00000297157 PELP1Q8IZL8 1130 aaKnown RBP34.89■■■■□ 3.18
RP9-201ENST00000297157 PHKG2P15735 406 aa34.88■■■■□ 3.17
RP9-201ENST00000297157 AK7Q96M32 723 aa34.88■■■■□ 3.17
RP9-201ENST00000297157 YBX3P16989 372 aaKnown RBP eCLIP34.87■■■■□ 3.17
RP9-201ENST00000297157 NPC1L1Q9UHC9 1359 aa34.87■■■■□ 3.17
RP9-201ENST00000297157 LOC102724428A0A0B4J2F2 783 aa34.86■■■■□ 3.17
RP9-201ENST00000297157 SIK1P57059 783 aa34.86■■■■□ 3.17
RP9-201ENST00000297157 IFNL2Q8IZJ0 200 aa34.86■■■■□ 3.17
RP9-201ENST00000297157 TMOD3Q9NYL9 352 aa34.86■■■■□ 3.17
RP9-201ENST00000297157 CD2APQ9Y5K6 639 aa34.85■■■■□ 3.17
RP9-201ENST00000297157 IGSF1Q8N6C5 1336 aa34.84■■■■□ 3.17
RP9-201ENST00000297157 GRIN3BO60391 1043 aa34.83■■■■□ 3.17
RP9-201ENST00000297157 LINC00116Q8NCU8 138 aa34.83■■■■□ 3.17
RP9-201ENST00000297157 SSFA2P28290 1259 aa34.82■■■■□ 3.16
RP9-201ENST00000297157 TNNT2P45379 298 aaPredicted RBP34.82■■■■□ 3.16
RP9-201ENST00000297157 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP34.81■■■■□ 3.16
RP9-201ENST00000297157 MORC1Q86VD1 984 aa34.81■■■■□ 3.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms