RNA–Protein interactions for RNA: ENST00000296978.3

TMEM200A-201, Transcript of transmembrane protein 200A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM200A, Length 3,512 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM200A-201ENST00000296978 PUS7Q96PZ0 661 aaKnown RBP15.29■□□□□ 0.04
TMEM200A-201ENST00000296978 ZCCHC11Q5TAX3 1644 aaKnown RBP15.28■□□□□ 0.04
TMEM200A-201ENST00000296978 CEP85Q6P2H3 762 aa15.28■□□□□ 0.04
TMEM200A-201ENST00000296978 LMBRD1Q9NUN5 540 aa15.28■□□□□ 0.04
TMEM200A-201ENST00000296978 TMX3Q96JJ7 454 aa15.28■□□□□ 0.04
TMEM200A-201ENST00000296978 NUTM2GQ5VZR2 741 aa15.27■□□□□ 0.04
TMEM200A-201ENST00000296978 TSPY26PQ9H489 355 aa15.27■□□□□ 0.04
TMEM200A-201ENST00000296978 MBD3O95983 291 aa15.27■□□□□ 0.04
TMEM200A-201ENST00000296978 CCDC39Q9UFE4 941 aa15.27■□□□□ 0.04
TMEM200A-201ENST00000296978 FIBPO43427 364 aa15.27■□□□□ 0.03
TMEM200A-201ENST00000296978 GNAI2P04899 355 aa15.27■□□□□ 0.03
TMEM200A-201ENST00000296978 NCBP3Q53F19 620 aaKnown RBP15.26■□□□□ 0.03
TMEM200A-201ENST00000296978 LRRCC1Q9C099 1032 aa15.26■□□□□ 0.03
TMEM200A-201ENST00000296978 SHROOM2Q13796 1616 aa15.26■□□□□ 0.03
TMEM200A-201ENST00000296978 ZNF830Q96NB3 372 aaPredicted RBP15.26■□□□□ 0.03
TMEM200A-201ENST00000296978 BCL11BQ9C0K0 894 aaPredicted RBP15.26■□□□□ 0.03
TMEM200A-201ENST00000296978 NUTM1Q86Y26 1132 aa15.25■□□□□ 0.03
TMEM200A-201ENST00000296978 NGDNQ8NEJ9 315 aaKnown RBP15.25■□□□□ 0.03
TMEM200A-201ENST00000296978 AK9Q5TCS8 1911 aa15.25■□□□□ 0.03
TMEM200A-201ENST00000296978 PHF14O94880 888 aa15.25■□□□□ 0.03
TMEM200A-201ENST00000296978 IL13P35225 146 aa15.25■□□□□ 0.03
TMEM200A-201ENST00000296978 DDX54Q8TDD1 881 aaKnown RBP15.25■□□□□ 0.03
TMEM200A-201ENST00000296978 CCDC61Q9Y6R9 512 aa15.25■□□□□ 0.03
TMEM200A-201ENST00000296978 SURF6O75683 361 aaKnown RBP15.25■□□□□ 0.03
TMEM200A-201ENST00000296978 PDE1AP54750 535 aa15.25■□□□□ 0.03
TMEM200A-201ENST00000296978 HSP90AB2PQ58FF8 381 aa15.25■□□□□ 0.03
TMEM200A-201ENST00000296978 TMEM63CQ9P1W3 806 aa15.25■□□□□ 0.03
TMEM200A-201ENST00000296978 ABCC4O15439 1325 aa15.24■□□□□ 0.03
TMEM200A-201ENST00000296978 FOXO3O43524 673 aa15.24■□□□□ 0.03
TMEM200A-201ENST00000296978 OFD1O75665 1012 aa15.24■□□□□ 0.03
TMEM200A-201ENST00000296978 CSPP1Q1MSJ5 1256 aa15.24■□□□□ 0.03
TMEM200A-201ENST00000296978 G2E3Q7L622 706 aa15.24■□□□□ 0.03
TMEM200A-201ENST00000296978 DRC7Q8IY82 874 aa15.24■□□□□ 0.03
TMEM200A-201ENST00000296978 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.24■□□□□ 0.03
TMEM200A-201ENST00000296978 VPS37CA5D8V6 355 aaPredicted RBP15.24■□□□□ 0.03
TMEM200A-201ENST00000296978 GOLGA6L4A6NEF3 574 aa15.24■□□□□ 0.03
TMEM200A-201ENST00000296978 GPT2Q8TD30 523 aa15.23■□□□□ 0.03
TMEM200A-201ENST00000296978 PDCL3Q9H2J4 239 aa15.23■□□□□ 0.03
TMEM200A-201ENST00000296978 MX1P20591 662 aa15.23■□□□□ 0.03
TMEM200A-201ENST00000296978 CEBPAP49715 358 aaPredicted RBP15.23■□□□□ 0.03
TMEM200A-201ENST00000296978 MSH6P52701 1360 aa15.23■□□□□ 0.03
TMEM200A-201ENST00000296978 WASLO00401 505 aaPredicted RBP15.23■□□□□ 0.03
TMEM200A-201ENST00000296978 DDIT3P35638 169 aa15.23■□□□□ 0.03
TMEM200A-201ENST00000296978 LRSAM1Q6UWE0 723 aa15.23■□□□□ 0.03
TMEM200A-201ENST00000296978 USP25Q9UHP3 1055 aa15.23■□□□□ 0.03
TMEM200A-201ENST00000296978 TAOK2Q9UL54 1235 aa15.22■□□□□ 0.03
TMEM200A-201ENST00000296978 NSFL1CQ9UNZ2 370 aaKnown RBP15.22■□□□□ 0.03
TMEM200A-201ENST00000296978 QRICH2Q9H0J4 1663 aa15.22■□□□□ 0.03
TMEM200A-201ENST00000296978 YTHDC2Q9H6S0 1430 aaKnown RBP15.22■□□□□ 0.03
TMEM200A-201ENST00000296978 EFCAB6Q5THR3 1501 aa15.22■□□□□ 0.03
TMEM200A-201ENST00000296978 UBTFL1P0CB47 393 aaPredicted RBP15.22■□□□□ 0.03
TMEM200A-201ENST00000296978 PPP1R9BQ96SB3 815 aa15.22■□□□□ 0.03
TMEM200A-201ENST00000296978 SMC3Q9UQE7 1217 aa15.22■□□□□ 0.03
TMEM200A-201ENST00000296978 ZNF445P59923 1031 aa15.21■□□□□ 0.03
TMEM200A-201ENST00000296978 SPC24Q8NBT2 197 aa15.21■□□□□ 0.03
TMEM200A-201ENST00000296978 PRDM10Q9NQV6 1147 aa15.21■□□□□ 0.03
TMEM200A-201ENST00000296978 CCT4P50991 539 aaKnown RBP15.21■□□□□ 0.02
TMEM200A-201ENST00000296978 EIF4A2Q14240 407 aaKnown RBP15.21■□□□□ 0.02
TMEM200A-201ENST00000296978 GNAI3P08754 354 aa15.2■□□□□ 0.02
TMEM200A-201ENST00000296978 MCM2P49736 904 aa15.2■□□□□ 0.02
TMEM200A-201ENST00000296978 LRRFIP2Q9Y608 721 aaKnown RBP15.2■□□□□ 0.02
TMEM200A-201ENST00000296978 CHAF1AQ13111 956 aaPredicted RBP15.2■□□□□ 0.02
TMEM200A-201ENST00000296978 ZKSCAN5Q9Y2L8 839 aa15.2■□□□□ 0.02
TMEM200A-201ENST00000296978 CWC27Q6UX04 472 aaKnown RBP15.19■□□□□ 0.02
TMEM200A-201ENST00000296978 DIAPH3Q9NSV4 1193 aa15.19■□□□□ 0.02
TMEM200A-201ENST00000296978 TULP4Q9NRJ4 1543 aa15.19■□□□□ 0.02
TMEM200A-201ENST00000296978 LMOD2Q6P5Q4 547 aa15.19■□□□□ 0.02
TMEM200A-201ENST00000296978 ESYT1Q9BSJ8 1104 aa15.19■□□□□ 0.02
TMEM200A-201ENST00000296978 PALD1Q9ULE6 856 aa15.19■□□□□ 0.02
TMEM200A-201ENST00000296978 TSPOAP1O95153 1857 aa15.19■□□□□ 0.02
TMEM200A-201ENST00000296978 NAP1L2Q9ULW6 460 aaPredicted RBP15.18■□□□□ 0.02
TMEM200A-201ENST00000296978 RIMS2Q9UQ26 1411 aa15.18■□□□□ 0.02
TMEM200A-201ENST00000296978 NOL7Q9UMY1 257 aaKnown RBP15.18■□□□□ 0.02
TMEM200A-201ENST00000296978 VIRMAQ69YN4 1812 aaKnown RBP15.18■□□□□ 0.02
TMEM200A-201ENST00000296978 WDR33Q9C0J8 1336 aaKnown RBP15.18■□□□□ 0.02
TMEM200A-201ENST00000296978 FAM177BA6PVY3 158 aa15.17■□□□□ 0.02
TMEM200A-201ENST00000296978 HCLS1P14317 486 aaPredicted RBP15.17■□□□□ 0.02
TMEM200A-201ENST00000296978 GADD45BO75293 160 aaPredicted RBP15.17■□□□□ 0.02
TMEM200A-201ENST00000296978 FGD1P98174 961 aa15.17■□□□□ 0.02
TMEM200A-201ENST00000296978 USP48Q86UV5 1035 aa15.17■□□□□ 0.02
TMEM200A-201ENST00000296978 TTC12Q9H892 705 aaPredicted RBP15.17■□□□□ 0.02
TMEM200A-201ENST00000296978 HDGFP51858 240 aaKnown RBP15.17■□□□□ 0.02
TMEM200A-201ENST00000296978 CCDC30Q5VVM6 783 aa15.17■□□□□ 0.02
TMEM200A-201ENST00000296978 SPG7Q9UQ90 795 aa15.17■□□□□ 0.02
TMEM200A-201ENST00000296978 ZFYVE9O95405 1425 aa15.17■□□□□ 0.02
TMEM200A-201ENST00000296978 SHPRHQ149N8 1683 aa15.16■□□□□ 0.02
TMEM200A-201ENST00000296978 C17orf53Q8N3J3 647 aaPredicted RBP15.16■□□□□ 0.02
TMEM200A-201ENST00000296978 PTPRCP08575 1304 aa15.16■□□□□ 0.02
TMEM200A-201ENST00000296978 FLIIQ13045 1269 aa15.16■□□□□ 0.02
TMEM200A-201ENST00000296978 TSC1Q92574 1164 aa15.16■□□□□ 0.02
TMEM200A-201ENST00000296978 NCOA3Q9Y6Q9 1424 aa15.16■□□□□ 0.02
TMEM200A-201ENST00000296978 SRGAP3O43295 1099 aa15.16■□□□□ 0.02
TMEM200A-201ENST00000296978 ZNF853P0CG23 659 aa15.16■□□□□ 0.02
TMEM200A-201ENST00000296978 BRPF1P55201 1214 aaPredicted RBP15.15■□□□□ 0.02
TMEM200A-201ENST00000296978 HDGFL1Q5TGJ6 251 aa15.15■□□□□ 0.02
TMEM200A-201ENST00000296978 FERMT3Q86UX7 667 aa15.15■□□□□ 0.02
TMEM200A-201ENST00000296978 CNPY2Q9Y2B0 182 aa15.15■□□□□ 0.02
TMEM200A-201ENST00000296978 CCDC9Q9Y3X0 531 aaKnown RBP15.15■□□□□ 0.02
TMEM200A-201ENST00000296978 PPRC1Q5VV67 1664 aaKnown RBP15.15■□□□□ 0.02
TMEM200A-201ENST00000296978 GLI2P10070 1586 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms