RNA–Protein interactions for RNA: ENST00000296946.6

T-201, Transcript of Brachyury protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene T, Length 2,436 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
T-201ENST00000296946 SPRYD3Q8NCJ5 442 aa22.66■■□□□ 1.22
T-201ENST00000296946 TNS3Q68CZ2 1445 aa22.66■■□□□ 1.22
T-201ENST00000296946 ALS2Q96Q42 1657 aa22.65■■□□□ 1.22
T-201ENST00000296946 AMPHP49418 695 aa22.65■■□□□ 1.22
T-201ENST00000296946 EIF4A2Q14240 407 aaKnown RBP22.65■■□□□ 1.22
T-201ENST00000296946 RUNDC1Q96C34 613 aa22.65■■□□□ 1.22
T-201ENST00000296946 PKNOX2Q96KN3 472 aa22.65■■□□□ 1.22
T-201ENST00000296946 GRPEL1Q9HAV7 217 aa22.65■■□□□ 1.22
T-201ENST00000296946 USP54Q70EL1 1684 aa22.64■■□□□ 1.22
T-201ENST00000296946 NFAT5O94916 1531 aa22.64■■□□□ 1.22
T-201ENST00000296946 HSCBQ8IWL3 235 aa22.64■■□□□ 1.21
T-201ENST00000296946 MED1Q15648 1581 aaPredicted RBP22.63■■□□□ 1.21
T-201ENST00000296946 HMOX1P09601 288 aa22.63■■□□□ 1.21
T-201ENST00000296946 RLBP1P12271 317 aa22.63■■□□□ 1.21
T-201ENST00000296946 PIP4K2BP78356 416 aa22.63■■□□□ 1.21
T-201ENST00000296946 HOXC9P31274 260 aa22.62■■□□□ 1.21
T-201ENST00000296946 ZC3H6P61129 1189 aaKnown RBP22.62■■□□□ 1.21
T-201ENST00000296946 ESPNB1AK53 854 aa22.62■■□□□ 1.21
T-201ENST00000296946 FLT4P35916 1363 aa22.61■■□□□ 1.21
T-201ENST00000296946 KCNH5Q8NCM2 988 aa22.61■■□□□ 1.21
T-201ENST00000296946 ROBO1Q9Y6N7 1651 aa22.6■■□□□ 1.21
T-201ENST00000296946 MVPQ14764 893 aaKnown RBP22.6■■□□□ 1.21
T-201ENST00000296946 PHF23Q9BUL5 403 aaPredicted RBP22.6■■□□□ 1.21
T-201ENST00000296946 SLIT3O75094 1523 aa22.6■■□□□ 1.21
T-201ENST00000296946 MFAP1P55081 439 aaKnown RBP22.6■■□□□ 1.21
T-201ENST00000296946 ARHGEF25Q86VW2 580 aa22.6■■□□□ 1.21
T-201ENST00000296946 TRIM44Q96DX7 344 aaPredicted RBP22.6■■□□□ 1.21
T-201ENST00000296946 RRP7AQ9Y3A4 280 aaKnown RBP22.6■■□□□ 1.21
T-201ENST00000296946 CCDC27Q2M243 656 aa22.59■■□□□ 1.21
T-201ENST00000296946 LTV1Q96GA3 475 aaPredicted RBP22.59■■□□□ 1.21
T-201ENST00000296946 PLEKHF1Q96S99 279 aa22.59■■□□□ 1.21
T-201ENST00000296946 NEUROD2Q15784 382 aa22.59■■□□□ 1.21
T-201ENST00000296946 AEBP1Q8IUX7 1158 aa22.59■■□□□ 1.21
T-201ENST00000296946 PTMSP20962 102 aa22.58■■□□□ 1.21
T-201ENST00000296946 TCP11L2Q8N4U5 519 aa22.58■■□□□ 1.21
T-201ENST00000296946 NCBP3Q53F19 620 aaKnown RBP22.58■■□□□ 1.2
T-201ENST00000296946 AXIN2Q9Y2T1 843 aa22.58■■□□□ 1.2
T-201ENST00000296946 UBAP1LF5GYI3 381 aa22.57■■□□□ 1.2
T-201ENST00000296946 VSIG10Q8N0Z9 540 aa22.57■■□□□ 1.2
T-201ENST00000296946 NHSL1Q5SYE7 1610 aa22.57■■□□□ 1.2
T-201ENST00000296946 ZKSCAN2Q63HK3 967 aa22.56■■□□□ 1.2
T-201ENST00000296946 ARHGEF10O15013 1369 aa22.56■■□□□ 1.2
T-201ENST00000296946 SKOR2Q2VWA4 1001 aaPredicted RBP22.56■■□□□ 1.2
T-201ENST00000296946 FTSJ3Q8IY81 847 aaKnown RBP22.56■■□□□ 1.2
T-201ENST00000296946 IP6K1Q92551 441 aa22.56■■□□□ 1.2
T-201ENST00000296946 TOM1O60784 492 aa22.55■■□□□ 1.2
T-201ENST00000296946 PRKAR2BP31323 418 aa22.55■■□□□ 1.2
T-201ENST00000296946 PHACTR3Q96KR7 559 aa22.55■■□□□ 1.2
T-201ENST00000296946 CIZ1Q9ULV3 898 aaPredicted RBP22.55■■□□□ 1.2
T-201ENST00000296946 TNNQ9UQP3 1299 aa22.55■■□□□ 1.2
T-201ENST00000296946 CT47B1P0C2W7 299 aaPredicted RBP22.54■■□□□ 1.2
T-201ENST00000296946 CHRNA2Q15822 529 aa22.54■■□□□ 1.2
T-201ENST00000296946 SULT6B1Q6IMI4 303 aa22.54■■□□□ 1.2
T-201ENST00000296946 DZIP1LQ8IYY4 767 aaKnown RBP22.54■■□□□ 1.2
T-201ENST00000296946 GBP4Q96PP9 640 aa22.54■■□□□ 1.2
T-201ENST00000296946 EYA1Q99502 592 aa22.54■■□□□ 1.2
T-201ENST00000296946 BCL2L13Q9BXK5 485 aa22.54■■□□□ 1.2
T-201ENST00000296946 IQSEC2Q5JU85 1478 aa22.54■■□□□ 1.2
T-201ENST00000296946 LTN1O94822 1766 aa22.54■■□□□ 1.2
T-201ENST00000296946 HDAC1Q13547 482 aaPredicted RBP22.53■■□□□ 1.2
T-201ENST00000296946 SNX21Q969T3 373 aa22.53■■□□□ 1.2
T-201ENST00000296946 FCHSD2O94868 740 aa22.52■■□□□ 1.2
T-201ENST00000296946 TPM2P07951 284 aa22.52■■□□□ 1.2
T-201ENST00000296946 CERKQ8TCT0 537 aa22.52■■□□□ 1.2
T-201ENST00000296946 DDIT3P35638 169 aa22.51■■□□□ 1.19
T-201ENST00000296946 ZMYND15Q9H091 742 aa22.51■■□□□ 1.19
T-201ENST00000296946 KIF24Q5T7B8 1368 aa22.5■■□□□ 1.19
T-201ENST00000296946 KIAA0232Q92628 1395 aa22.5■■□□□ 1.19
T-201ENST00000296946 USHBP1Q8N6Y0 703 aa22.5■■□□□ 1.19
T-201ENST00000296946 RBM25P49756 843 aaKnown RBP22.5■■□□□ 1.19
T-201ENST00000296946 LRRC59Q96AG4 307 aaKnown RBP22.5■■□□□ 1.19
T-201ENST00000296946 RTL1A6NKG5 1358 aa22.49■■□□□ 1.19
T-201ENST00000296946 SMC5Q8IY18 1101 aa22.49■■□□□ 1.19
T-201ENST00000296946 PHRF1Q9P1Y6 1649 aaKnown RBP22.49■■□□□ 1.19
T-201ENST00000296946 DDX19BQ9UMR2 479 aa22.48■■□□□ 1.19
T-201ENST00000296946 CRYBG1Q9Y4K1 1723 aa22.48■■□□□ 1.19
T-201ENST00000296946 NBPF6Q5VWK0 638 aa22.47■■□□□ 1.19
T-201ENST00000296946 NBPF4Q96M43 638 aa22.47■■□□□ 1.19
T-201ENST00000296946 AHDC1Q5TGY3 1603 aaPredicted RBP22.47■■□□□ 1.19
T-201ENST00000296946 IGSF1Q8N6C5 1336 aa22.47■■□□□ 1.19
T-201ENST00000296946 TNPO1Q92973 898 aaKnown RBP22.47■■□□□ 1.19
T-201ENST00000296946 ERBB4Q15303 1308 aa22.46■■□□□ 1.19
T-201ENST00000296946 TMPOP42166 694 aaKnown RBP22.46■■□□□ 1.19
T-201ENST00000296946 RGPD1P0DJD0 1748 aa22.45■■□□□ 1.19
T-201ENST00000296946 HAP1P54257 671 aaPredicted RBP22.45■■□□□ 1.18
T-201ENST00000296946 ANKRD24Q8TF21 1146 aa22.45■■□□□ 1.18
T-201ENST00000296946 HSP90AB1P08238 724 aaKnown RBP22.45■■□□□ 1.18
T-201ENST00000296946 RAB3GAP1Q15042 981 aa22.44■■□□□ 1.18
T-201ENST00000296946 CCDC173Q0VFZ6 552 aa22.43■■□□□ 1.18
T-201ENST00000296946 PRDM11Q9NQV5 511 aa22.42■■□□□ 1.18
T-201ENST00000296946 TRIM35Q9UPQ4 493 aa22.42■■□□□ 1.18
T-201ENST00000296946 RIPK4P57078 832 aa22.42■■□□□ 1.18
T-201ENST00000296946 ANP32BQ92688 251 aaKnown RBP22.42■■□□□ 1.18
T-201ENST00000296946 ERBB3P21860 1342 aa22.42■■□□□ 1.18
T-201ENST00000296946 CPDO75976 1380 aa22.42■■□□□ 1.18
T-201ENST00000296946 KDRP35968 1356 aa22.42■■□□□ 1.18
T-201ENST00000296946 SMC4Q9NTJ3 1288 aa22.41■■□□□ 1.18
T-201ENST00000296946 GAS2L3Q86XJ1 694 aa22.41■■□□□ 1.18
T-201ENST00000296946 PDCL3Q9H2J4 239 aa22.41■■□□□ 1.18
T-201ENST00000296946 COL16A1Q07092 1604 aaPredicted RBP22.4■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms