RNA–Protein interactions for RNA: ENST00000295226.1

CCDC140-201, Transcript of coiled-coil domain containing 140, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC140, Length 1,699 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC140-201ENST00000295226 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.02■□□□□ 0.8
CCDC140-201ENST00000295226 GJD4Q96KN9 370 aaPredicted RBP20.02■□□□□ 0.8
CCDC140-201ENST00000295226 ATRNO75882 1429 aa20.02■□□□□ 0.79
CCDC140-201ENST00000295226 NEFMP07197 916 aa20.01■□□□□ 0.79
CCDC140-201ENST00000295226 TMPOP42166 694 aaKnown RBP20■□□□□ 0.79
CCDC140-201ENST00000295226 PLEKHO1Q53GL0 409 aaPredicted RBP19.99■□□□□ 0.79
CCDC140-201ENST00000295226 ZNF772Q68DY9 489 aaPredicted RBP19.99■□□□□ 0.79
CCDC140-201ENST00000295226 PHF23Q9BUL5 403 aaPredicted RBP19.99■□□□□ 0.79
CCDC140-201ENST00000295226 THRAP3Q9Y2W1 955 aaKnown RBP19.99■□□□□ 0.79
CCDC140-201ENST00000295226 RIPK4P57078 832 aa19.98■□□□□ 0.79
CCDC140-201ENST00000295226 NFE2L2Q16236 605 aa19.98■□□□□ 0.79
CCDC140-201ENST00000295226 GLI3P10071 1580 aa19.98■□□□□ 0.79
CCDC140-201ENST00000295226 DISP2A7MBM2 1401 aa19.98■□□□□ 0.79
CCDC140-201ENST00000295226 A0A0G2JS52 829 aa19.97■□□□□ 0.79
CCDC140-201ENST00000295226 MYT1Q01538 1121 aa19.97■□□□□ 0.79
CCDC140-201ENST00000295226 ZNF530Q6P9A1 599 aaPredicted RBP19.97■□□□□ 0.79
CCDC140-201ENST00000295226 BARGINQ6ZT62 677 aa19.97■□□□□ 0.79
CCDC140-201ENST00000295226 OVOS2A0A0G2JMS6 1433 aa19.97■□□□□ 0.79
CCDC140-201ENST00000295226 ZCRB1Q8TBF4 217 aaKnown RBP19.97■□□□□ 0.79
CCDC140-201ENST00000295226 POTEAQ6S8J7 498 aa19.96■□□□□ 0.79
CCDC140-201ENST00000295226 DDX54Q8TDD1 881 aaKnown RBP19.96■□□□□ 0.79
CCDC140-201ENST00000295226 SPG7Q9UQ90 795 aa19.96■□□□□ 0.79
CCDC140-201ENST00000295226 DCTN1Q14203 1278 aa19.95■□□□□ 0.78
CCDC140-201ENST00000295226 AMOTQ4VCS5 1084 aa19.95■□□□□ 0.78
CCDC140-201ENST00000295226 GAS2L2Q8NHY3 880 aa19.95■□□□□ 0.78
CCDC140-201ENST00000295226 CYP27B1O15528 508 aa19.94■□□□□ 0.78
CCDC140-201ENST00000295226 TRIM35Q9UPQ4 493 aa19.94■□□□□ 0.78
CCDC140-201ENST00000295226 DLG5Q8TDM6 1919 aa19.94■□□□□ 0.78
CCDC140-201ENST00000295226 PARP4Q9UKK3 1724 aaKnown RBP19.94■□□□□ 0.78
CCDC140-201ENST00000295226 WNK3Q9BYP7 1800 aa19.94■□□□□ 0.78
CCDC140-201ENST00000295226 EXOC5O00471 708 aa19.94■□□□□ 0.78
CCDC140-201ENST00000295226 THUMPD2Q9BTF0 503 aaKnown RBP19.94■□□□□ 0.78
CCDC140-201ENST00000295226 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.93■□□□□ 0.78
CCDC140-201ENST00000295226 GTF3C3Q9Y5Q9 886 aa19.93■□□□□ 0.78
CCDC140-201ENST00000295226 DDB1Q16531 1140 aa19.92■□□□□ 0.78
CCDC140-201ENST00000295226 MCM10Q7L590 875 aa19.92■□□□□ 0.78
CCDC140-201ENST00000295226 CDCA7Q9BWT1 371 aaPredicted RBP19.92■□□□□ 0.78
CCDC140-201ENST00000295226 RBM6P78332 1123 aaKnown RBP19.91■□□□□ 0.78
CCDC140-201ENST00000295226 C1orf141Q5JVX7 400 aa19.91■□□□□ 0.78
CCDC140-201ENST00000295226 PKD1L3Q7Z443 1732 aa19.91■□□□□ 0.78
CCDC140-201ENST00000295226 GNAT3A8MTJ3 354 aa19.91■□□□□ 0.78
CCDC140-201ENST00000295226 PHKG2P15735 406 aa19.91■□□□□ 0.78
CCDC140-201ENST00000295226 MPRIPQ6WCQ1 1025 aa19.91■□□□□ 0.78
CCDC140-201ENST00000295226 SEPT12Q8IYM1 358 aa19.91■□□□□ 0.78
CCDC140-201ENST00000295226 LGR6Q9HBX8 967 aa19.91■□□□□ 0.78
CCDC140-201ENST00000295226 ONECUT3O60422 494 aaPredicted RBP19.9■□□□□ 0.78
CCDC140-201ENST00000295226 AKAP4Q5JQC9 854 aa19.9■□□□□ 0.78
CCDC140-201ENST00000295226 WWC1Q8IX03 1113 aa19.9■□□□□ 0.78
CCDC140-201ENST00000295226 SHANK3Q9BYB0 1731 aa19.89■□□□□ 0.78
CCDC140-201ENST00000295226 MAP3K5Q99683 1374 aa19.89■□□□□ 0.77
CCDC140-201ENST00000295226 RXRBP28702 533 aa19.89■□□□□ 0.77
CCDC140-201ENST00000295226 IFNL2Q8IZJ0 200 aa19.89■□□□□ 0.77
CCDC140-201ENST00000295226 PCDH11XQ9BZA7 1347 aa19.89■□□□□ 0.77
CCDC140-201ENST00000295226 PCDH11YQ9BZA8 1340 aa19.89■□□□□ 0.77
CCDC140-201ENST00000295226 IL17REQ8NFR9 667 aa19.88■□□□□ 0.77
CCDC140-201ENST00000295226 LRRC37A3O60309 1634 aa19.88■□□□□ 0.77
CCDC140-201ENST00000295226 FAM182BQ5T319 152 aa19.87■□□□□ 0.77
CCDC140-201ENST00000295226 MARCH10Q8NA82 808 aaPredicted RBP19.87■□□□□ 0.77
CCDC140-201ENST00000295226 RTF1Q92541 710 aaKnown RBP19.87■□□□□ 0.77
CCDC140-201ENST00000295226 THSD7AQ9UPZ6 1657 aa19.87■□□□□ 0.77
CCDC140-201ENST00000295226 TNS2Q63HR2 1409 aa19.87■□□□□ 0.77
CCDC140-201ENST00000295226 RNMTO43148 476 aaKnown RBP19.85■□□□□ 0.77
CCDC140-201ENST00000295226 PDE3BQ13370 1112 aa19.85■□□□□ 0.77
CCDC140-201ENST00000295226 CCDC27Q2M243 656 aa19.85■□□□□ 0.77
CCDC140-201ENST00000295226 ZBED9Q6R2W3 1325 aa19.85■□□□□ 0.77
CCDC140-201ENST00000295226 ZNF521Q96K83 1311 aa19.85■□□□□ 0.77
CCDC140-201ENST00000295226 CDCA7LQ96GN5 454 aa19.84■□□□□ 0.77
CCDC140-201ENST00000295226 PLEKHG2Q9H7P9 1386 aa19.84■□□□□ 0.77
CCDC140-201ENST00000295226 LMOD3Q0VAK6 560 aa19.84■□□□□ 0.77
CCDC140-201ENST00000295226 SPINK5Q9NQ38 1064 aaPredicted RBP19.84■□□□□ 0.77
CCDC140-201ENST00000295226 KAT6BQ8WYB5 2073 aa19.84■□□□□ 0.77
CCDC140-201ENST00000295226 KDM6AO15550 1401 aaPredicted RBP19.83■□□□□ 0.77
CCDC140-201ENST00000295226 HTATSF1O43719 755 aaKnown RBP19.83■□□□□ 0.76
CCDC140-201ENST00000295226 LAS1LQ9Y4W2 734 aaKnown RBP19.83■□□□□ 0.76
CCDC140-201ENST00000295226 NGEFQ8N5V2 710 aa19.82■□□□□ 0.76
CCDC140-201ENST00000295226 NKX1-1Q15270 411 aaPredicted RBP19.81■□□□□ 0.76
CCDC140-201ENST00000295226 NCBP3Q53F19 620 aaKnown RBP19.81■□□□□ 0.76
CCDC140-201ENST00000295226 DCAF5Q96JK2 942 aa19.81■□□□□ 0.76
CCDC140-201ENST00000295226 MIS18AQ9NYP9 233 aa19.81■□□□□ 0.76
CCDC140-201ENST00000295226 VIRMAQ69YN4 1812 aaKnown RBP19.81■□□□□ 0.76
CCDC140-201ENST00000295226 BRWD3Q6RI45 1802 aa19.81■□□□□ 0.76
CCDC140-201ENST00000295226 HSP90AB1P08238 724 aaKnown RBP19.81■□□□□ 0.76
CCDC140-201ENST00000295226 ACSBG1Q96GR2 724 aa19.8■□□□□ 0.76
CCDC140-201ENST00000295226 RGS12O14924 1447 aa19.79■□□□□ 0.76
CCDC140-201ENST00000295226 CEMIPQ8WUJ3 1361 aa19.79■□□□□ 0.76
CCDC140-201ENST00000295226 GOLGA2Q08379 1002 aa19.79■□□□□ 0.76
CCDC140-201ENST00000295226 WDR63Q8IWG1 891 aa19.79■□□□□ 0.76
CCDC140-201ENST00000295226 KRT27Q7Z3Y8 459 aa19.78■□□□□ 0.76
CCDC140-201ENST00000295226 NFATC2IPQ8NCF5 419 aa19.78■□□□□ 0.76
CCDC140-201ENST00000295226 SCN11AQ9UI33 1791 aa19.78■□□□□ 0.76
CCDC140-201ENST00000295226 TEFQ10587 303 aa19.78■□□□□ 0.76
CCDC140-201ENST00000295226 CABP4P57796 275 aa19.77■□□□□ 0.76
CCDC140-201ENST00000295226 SYTL4Q96C24 671 aaPredicted RBP19.77■□□□□ 0.76
CCDC140-201ENST00000295226 PRIM1P49642 420 aaKnown RBP19.76■□□□□ 0.75
CCDC140-201ENST00000295226 TSR2Q969E8 191 aaKnown RBP19.76■□□□□ 0.75
CCDC140-201ENST00000295226 SLC52A2Q9HAB3 445 aa19.76■□□□□ 0.75
CCDC140-201ENST00000295226 TOGARAM1Q9Y4F4 1720 aa19.76■□□□□ 0.75
CCDC140-201ENST00000295226 KCNQ2O43526 872 aa19.75■□□□□ 0.75
CCDC140-201ENST00000295226 SLFN5Q08AF3 891 aa19.75■□□□□ 0.75
CCDC140-201ENST00000295226 TAF7Q15545 349 aaPredicted RBP19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms