RNA–Protein interactions for RNA: ENST00000292393.9

ZNF3-201, Transcript of zinc finger protein 3, humanhuman

TSL 2

Gene ZNF3, Length 512 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF3-201ENST00000292393 RAPGEF4Q8WZA2 1011 aa15.85■□□□□ 0.13
ZNF3-201ENST00000292393 LRP6O75581 1613 aa15.84■□□□□ 0.13
ZNF3-201ENST00000292393 TATP17735 454 aaPredicted RBP15.84■□□□□ 0.13
ZNF3-201ENST00000292393 LARP1Q6PKG0 1096 aaKnown RBP15.84■□□□□ 0.13
ZNF3-201ENST00000292393 OVOS2A0A0G2JMS6 1433 aa15.84■□□□□ 0.13
ZNF3-201ENST00000292393 MEGF6O75095 1541 aa15.84■□□□□ 0.13
ZNF3-201ENST00000292393 DUSP27Q5VZP5 1158 aa15.83■□□□□ 0.12
ZNF3-201ENST00000292393 CDCA7LQ96GN5 454 aa15.83■□□□□ 0.12
ZNF3-201ENST00000292393 STRN4Q9NRL3 753 aa15.83■□□□□ 0.12
ZNF3-201ENST00000292393 MAP3K5Q99683 1374 aa15.83■□□□□ 0.12
ZNF3-201ENST00000292393 PARP4Q9UKK3 1724 aaKnown RBP15.82■□□□□ 0.12
ZNF3-201ENST00000292393 GNAT3A8MTJ3 354 aa15.82■□□□□ 0.12
ZNF3-201ENST00000292393 AKAP4Q5JQC9 854 aa15.82■□□□□ 0.12
ZNF3-201ENST00000292393 FNBP4Q8N3X1 1017 aaPredicted RBP15.82■□□□□ 0.12
ZNF3-201ENST00000292393 MYH16Q9H6N6 1097 aa15.82■□□□□ 0.12
ZNF3-201ENST00000292393 PKD1L3Q7Z443 1732 aa15.81■□□□□ 0.12
ZNF3-201ENST00000292393 DLG5Q8TDM6 1919 aa15.81■□□□□ 0.12
ZNF3-201ENST00000292393 RTF1Q92541 710 aaKnown RBP15.81■□□□□ 0.12
ZNF3-201ENST00000292393 SPG7Q9UQ90 795 aa15.81■□□□□ 0.12
ZNF3-201ENST00000292393 THRAP3Q9Y2W1 955 aaKnown RBP15.81■□□□□ 0.12
ZNF3-201ENST00000292393 LRRC37A3O60309 1634 aa15.8■□□□□ 0.12
ZNF3-201ENST00000292393 DISP2A7MBM2 1401 aa15.8■□□□□ 0.12
ZNF3-201ENST00000292393 IL2RBP14784 551 aa15.8■□□□□ 0.12
ZNF3-201ENST00000292393 SPINK5Q9NQ38 1064 aaPredicted RBP15.8■□□□□ 0.12
ZNF3-201ENST00000292393 IFT57Q9NWB7 429 aa15.8■□□□□ 0.12
ZNF3-201ENST00000292393 ZNF853P0CG23 659 aa15.79■□□□□ 0.12
ZNF3-201ENST00000292393 ZNF530Q6P9A1 599 aaPredicted RBP15.79■□□□□ 0.12
ZNF3-201ENST00000292393 UNC5CLQ8IV45 518 aa15.79■□□□□ 0.12
ZNF3-201ENST00000292393 CDCA7Q9BWT1 371 aaPredicted RBP15.79■□□□□ 0.12
ZNF3-201ENST00000292393 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.79■□□□□ 0.12
ZNF3-201ENST00000292393 BCL9LQ86UU0 1499 aa15.78■□□□□ 0.12
ZNF3-201ENST00000292393 CEMIPQ8WUJ3 1361 aa15.78■□□□□ 0.12
ZNF3-201ENST00000292393 GNAI1P63096 354 aa15.78■□□□□ 0.12
ZNF3-201ENST00000292393 C1orf141Q5JVX7 400 aa15.78■□□□□ 0.12
ZNF3-201ENST00000292393 NGLY1Q96IV0 654 aa15.78■□□□□ 0.12
ZNF3-201ENST00000292393 CFAP44Q96MT7 982 aa15.78■□□□□ 0.12
ZNF3-201ENST00000292393 ADAMTS7Q9UKP4 1686 aa15.78■□□□□ 0.12
ZNF3-201ENST00000292393 SPATA31A1Q5TZJ5 1347 aa15.77■□□□□ 0.12
ZNF3-201ENST00000292393 SPATA31A5Q5VU36 1347 aa15.77■□□□□ 0.12
ZNF3-201ENST00000292393 SPATA31A7Q8IWB4 1347 aa15.77■□□□□ 0.12
ZNF3-201ENST00000292393 VPS72Q15906 364 aa15.77■□□□□ 0.12
ZNF3-201ENST00000292393 FBXO41Q8TF61 875 aa15.77■□□□□ 0.12
ZNF3-201ENST00000292393 C8orf37Q96NL8 207 aa15.77■□□□□ 0.12
ZNF3-201ENST00000292393 BABAM1Q9NWV8 329 aa15.77■□□□□ 0.12
ZNF3-201ENST00000292393 PCDH11XQ9BZA7 1347 aa15.76■□□□□ 0.11
ZNF3-201ENST00000292393 PCDH11YQ9BZA8 1340 aa15.76■□□□□ 0.11
ZNF3-201ENST00000292393 CT47B1P0C2W7 299 aaPredicted RBP15.76■□□□□ 0.11
ZNF3-201ENST00000292393 MCM10Q7L590 875 aa15.76■□□□□ 0.11
ZNF3-201ENST00000292393 IFNL2Q8IZJ0 200 aa15.76■□□□□ 0.11
ZNF3-201ENST00000292393 FANCIQ9NVI1 1328 aa15.75■□□□□ 0.11
ZNF3-201ENST00000292393 HSP90AB1P08238 724 aaKnown RBP15.75■□□□□ 0.11
ZNF3-201ENST00000292393 PHKG2P15735 406 aa15.75■□□□□ 0.11
ZNF3-201ENST00000292393 DCTN1Q14203 1278 aa15.75■□□□□ 0.11
ZNF3-201ENST00000292393 BARGINQ6ZT62 677 aa15.75■□□□□ 0.11
ZNF3-201ENST00000292393 IL17REQ8NFR9 667 aa15.75■□□□□ 0.11
ZNF3-201ENST00000292393 ZCRB1Q8TBF4 217 aaKnown RBP15.75■□□□□ 0.11
ZNF3-201ENST00000292393 THUMPD2Q9BTF0 503 aaKnown RBP15.75■□□□□ 0.11
ZNF3-201ENST00000292393 WNK3Q9BYP7 1800 aa15.74■□□□□ 0.11
ZNF3-201ENST00000292393 CHL1O00533 1208 aa15.74■□□□□ 0.11
ZNF3-201ENST00000292393 MEX3CQ5U5Q3 659 aaKnown RBP15.74■□□□□ 0.11
ZNF3-201ENST00000292393 CYP27B1O15528 508 aa15.73■□□□□ 0.11
ZNF3-201ENST00000292393 DCAF5Q96JK2 942 aa15.73■□□□□ 0.11
ZNF3-201ENST00000292393 USP21Q9UK80 565 aa15.73■□□□□ 0.11
ZNF3-201ENST00000292393 TNS2Q63HR2 1409 aa15.72■□□□□ 0.11
ZNF3-201ENST00000292393 RNMTO43148 476 aaKnown RBP15.72■□□□□ 0.11
ZNF3-201ENST00000292393 NKX1-1Q15270 411 aaPredicted RBP15.72■□□□□ 0.11
ZNF3-201ENST00000292393 MRC1P22897 1456 aa15.71■□□□□ 0.11
ZNF3-201ENST00000292393 TAF7Q15545 349 aaPredicted RBP15.71■□□□□ 0.11
ZNF3-201ENST00000292393 TSR2Q969E8 191 aaKnown RBP15.71■□□□□ 0.11
ZNF3-201ENST00000292393 MBIPQ9NS73 344 aa15.71■□□□□ 0.11
ZNF3-201ENST00000292393 USP35Q9P2H5 1018 aa15.71■□□□□ 0.11
ZNF3-201ENST00000292393 RCAN3Q9UKA8 241 aa15.71■□□□□ 0.11
ZNF3-201ENST00000292393 SHANK3Q9BYB0 1731 aa15.71■□□□□ 0.1
ZNF3-201ENST00000292393 RNF123Q5XPI4 1314 aa15.7■□□□□ 0.1
ZNF3-201ENST00000292393 KDM6AO15550 1401 aaPredicted RBP15.7■□□□□ 0.1
ZNF3-201ENST00000292393 MPRIPQ6WCQ1 1025 aa15.7■□□□□ 0.1
ZNF3-201ENST00000292393 LGR6Q9HBX8 967 aa15.7■□□□□ 0.1
ZNF3-201ENST00000292393 AFF2P51816 1311 aa15.69■□□□□ 0.1
ZNF3-201ENST00000292393 ATRNO75882 1429 aa15.69■□□□□ 0.1
ZNF3-201ENST00000292393 TEFQ10587 303 aa15.69■□□□□ 0.1
ZNF3-201ENST00000292393 ZNF428Q96B54 188 aa15.69■□□□□ 0.1
ZNF3-201ENST00000292393 LAS1LQ9Y4W2 734 aaKnown RBP15.69■□□□□ 0.1
ZNF3-201ENST00000292393 SCN11AQ9UI33 1791 aa15.68■□□□□ 0.1
ZNF3-201ENST00000292393 EXOC5O00471 708 aa15.68■□□□□ 0.1
ZNF3-201ENST00000292393 EXOSC9Q06265 439 aaKnown RBP15.68■□□□□ 0.1
ZNF3-201ENST00000292393 TSPYL4Q9UJ04 414 aa15.68■□□□□ 0.1
ZNF3-201ENST00000292393 CCDC9Q9Y3X0 531 aaKnown RBP15.68■□□□□ 0.1
ZNF3-201ENST00000292393 SOS1Q07889 1333 aaPredicted RBP15.68■□□□□ 0.1
ZNF3-201ENST00000292393 ERVV-2B6SEH9 535 aa15.67■□□□□ 0.1
ZNF3-201ENST00000292393 TRPC5Q9UL62 973 aaPredicted RBP15.67■□□□□ 0.1
ZNF3-201ENST00000292393 SLC52A2Q9HAB3 445 aa15.66■□□□□ 0.1
ZNF3-201ENST00000292393 SUPT16HQ9Y5B9 1047 aaKnown RBP15.66■□□□□ 0.1
ZNF3-201ENST00000292393 SIPA1L3O60292 1781 aaPredicted RBP15.66■□□□□ 0.1
ZNF3-201ENST00000292393 DDB1Q16531 1140 aa15.65■□□□□ 0.1
ZNF3-201ENST00000292393 GJD4Q96KN9 370 aaPredicted RBP15.65■□□□□ 0.1
ZNF3-201ENST00000292393 KDM3BQ7LBC6 1761 aa15.64■□□□□ 0.1
ZNF3-201ENST00000292393 THSD7AQ9UPZ6 1657 aa15.64■□□□□ 0.09
ZNF3-201ENST00000292393 ONECUT3O60422 494 aaPredicted RBP15.64■□□□□ 0.09
ZNF3-201ENST00000292393 GLI3P10071 1580 aa15.64■□□□□ 0.09
ZNF3-201ENST00000292393 RARSP54136 660 aaKnown RBP15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms