RNA–Protein interactions for RNA: ENST00000291527.2

TFF1-201, Transcript of trefoil factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TFF1, Length 551 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF1-201ENST00000291527 ANKRD36BQ8N2N9 1353 aa12.42□□□□□ -0.42
TFF1-201ENST00000291527 USP47Q96K76 1375 aa12.42□□□□□ -0.42
TFF1-201ENST00000291527 NINLQ9Y2I6 1382 aa12.42□□□□□ -0.42
TFF1-201ENST00000291527 AMPHP49418 695 aa12.41□□□□□ -0.42
TFF1-201ENST00000291527 HSP90AB2PQ58FF8 381 aa12.41□□□□□ -0.42
TFF1-201ENST00000291527 SYT17Q9BSW7 474 aa12.41□□□□□ -0.42
TFF1-201ENST00000291527 TRIM26Q12899 539 aaPredicted RBP12.4□□□□□ -0.42
TFF1-201ENST00000291527 COL24A1Q17RW2 1714 aa12.4□□□□□ -0.43
TFF1-201ENST00000291527 MAP2P11137 1827 aaKnown RBP12.39□□□□□ -0.43
TFF1-201ENST00000291527 SMIM5Q71RC9 77 aa12.39□□□□□ -0.43
TFF1-201ENST00000291527 ZCRB1Q8TBF4 217 aaKnown RBP12.39□□□□□ -0.43
TFF1-201ENST00000291527 SYTL4Q96C24 671 aaPredicted RBP12.39□□□□□ -0.43
TFF1-201ENST00000291527 MTFR1LQ9H019 292 aa12.39□□□□□ -0.43
TFF1-201ENST00000291527 QSER1Q2KHR3 1735 aa12.39□□□□□ -0.43
TFF1-201ENST00000291527 TOGARAM1Q9Y4F4 1720 aa12.39□□□□□ -0.43
TFF1-201ENST00000291527 ITGB4P16144 1822 aa12.39□□□□□ -0.43
TFF1-201ENST00000291527 PNPLA7Q6ZV29 1317 aa12.38□□□□□ -0.43
TFF1-201ENST00000291527 EMILIN1Q9Y6C2 1016 aa12.38□□□□□ -0.43
TFF1-201ENST00000291527 TMF1P82094 1093 aa12.37□□□□□ -0.43
TFF1-201ENST00000291527 CHD4Q14839 1912 aa12.37□□□□□ -0.43
TFF1-201ENST00000291527 AMIGO3Q86WK7 504 aa12.36□□□□□ -0.43
TFF1-201ENST00000291527 ARXQ96QS3 562 aa12.36□□□□□ -0.43
TFF1-201ENST00000291527 TAF1LQ8IZX4 1826 aa12.36□□□□□ -0.43
TFF1-201ENST00000291527 CYP27B1O15528 508 aa12.35□□□□□ -0.43
TFF1-201ENST00000291527 NSD3Q9BZ95 1437 aa12.35□□□□□ -0.43
TFF1-201ENST00000291527 NLGN2Q8NFZ4 835 aa12.34□□□□□ -0.43
TFF1-201ENST00000291527 RTL1A6NKG5 1358 aa12.33□□□□□ -0.44
TFF1-201ENST00000291527 COL23A1Q86Y22 540 aaPredicted RBP12.33□□□□□ -0.44
TFF1-201ENST00000291527 C5P01031 1676 aa12.32□□□□□ -0.44
TFF1-201ENST00000291527 INSRP06213 1382 aa12.32□□□□□ -0.44
TFF1-201ENST00000291527 PKD1L3Q7Z443 1732 aa12.32□□□□□ -0.44
TFF1-201ENST00000291527 ANKRD26Q9UPS8 1709 aa12.32□□□□□ -0.44
TFF1-201ENST00000291527 SLC27A3Q5K4L6 730 aa12.32□□□□□ -0.44
TFF1-201ENST00000291527 MSL1Q68DK7 614 aa12.32□□□□□ -0.44
TFF1-201ENST00000291527 KLHL34Q8N239 644 aa12.32□□□□□ -0.44
TFF1-201ENST00000291527 ZNF784Q8NCA9 323 aaPredicted RBP12.32□□□□□ -0.44
TFF1-201ENST00000291527 PCGF6Q9BYE7 350 aa12.32□□□□□ -0.44
TFF1-201ENST00000291527 TFCP2L1Q9NZI6 479 aa12.32□□□□□ -0.44
TFF1-201ENST00000291527 CCNL1Q9UK58 526 aaPredicted RBP12.32□□□□□ -0.44
TFF1-201ENST00000291527 PPM1GO15355 546 aaPredicted RBP12.31□□□□□ -0.44
TFF1-201ENST00000291527 TATP17735 454 aaPredicted RBP12.3□□□□□ -0.44
TFF1-201ENST00000291527 MPRIPQ6WCQ1 1025 aa12.3□□□□□ -0.44
TFF1-201ENST00000291527 RAPGEF4Q8WZA2 1011 aa12.3□□□□□ -0.44
TFF1-201ENST00000291527 EYA1Q99502 592 aa12.3□□□□□ -0.44
TFF1-201ENST00000291527 POLR3GLQ9BT43 218 aa12.3□□□□□ -0.44
TFF1-201ENST00000291527 FLT4P35916 1363 aa12.3□□□□□ -0.44
TFF1-201ENST00000291527 TNNT2P45379 298 aaPredicted RBP12.29□□□□□ -0.44
TFF1-201ENST00000291527 PIGBQ92521 554 aa12.29□□□□□ -0.44
TFF1-201ENST00000291527 POLKQ9UBT6 870 aa12.29□□□□□ -0.44
TFF1-201ENST00000291527 UBR3Q6ZT12 1888 aa12.29□□□□□ -0.44
TFF1-201ENST00000291527 NCAPD2Q15021 1401 aa12.28□□□□□ -0.44
TFF1-201ENST00000291527 MSH5O43196 834 aa12.28□□□□□ -0.44
TFF1-201ENST00000291527 MAP3K5Q99683 1374 aa12.28□□□□□ -0.44
TFF1-201ENST00000291527 CEP350Q5VT06 3117 aa12.27□□□□□ -0.44
TFF1-201ENST00000291527 DCAF8L1A6NGE4 600 aa12.27□□□□□ -0.45
TFF1-201ENST00000291527 YBX3P16989 372 aaKnown RBP eCLIP12.27□□□□□ -0.45
TFF1-201ENST00000291527 C4BP0C0L5 1744 aa12.27□□□□□ -0.45
TFF1-201ENST00000291527 PALLDQ8WX93 1383 aa12.27□□□□□ -0.45
TFF1-201ENST00000291527 HSPA5P11021 654 aaKnown RBP12.26□□□□□ -0.45
TFF1-201ENST00000291527 PELP1Q8IZL8 1130 aaKnown RBP12.26□□□□□ -0.45
TFF1-201ENST00000291527 SLC16A10Q8TF71 515 aa12.26□□□□□ -0.45
TFF1-201ENST00000291527 ASAP1Q9ULH1 1129 aa12.26□□□□□ -0.45
TFF1-201ENST00000291527 SMG6Q86US8 1419 aaKnown RBP12.26□□□□□ -0.45
TFF1-201ENST00000291527 SLC24A1O60721 1099 aa12.25□□□□□ -0.45
TFF1-201ENST00000291527 EIF4A2Q14240 407 aaKnown RBP12.25□□□□□ -0.45
TFF1-201ENST00000291527 GPR162Q16538 588 aa12.25□□□□□ -0.45
TFF1-201ENST00000291527 LINC00116Q8NCU8 138 aa12.25□□□□□ -0.45
TFF1-201ENST00000291527 CGNL1Q0VF96 1302 aa12.25□□□□□ -0.45
TFF1-201ENST00000291527 WASHC2AQ641Q2 1341 aa12.25□□□□□ -0.45
TFF1-201ENST00000291527 PCDH11XQ9BZA7 1347 aa12.25□□□□□ -0.45
TFF1-201ENST00000291527 PCDH11YQ9BZA8 1340 aa12.25□□□□□ -0.45
TFF1-201ENST00000291527 ITPK1Q13572 414 aa12.24□□□□□ -0.45
TFF1-201ENST00000291527 NKX1-1Q15270 411 aaPredicted RBP12.24□□□□□ -0.45
TFF1-201ENST00000291527 WWC3Q9ULE0 1092 aa12.24□□□□□ -0.45
TFF1-201ENST00000291527 KIF24Q5T7B8 1368 aa12.23□□□□□ -0.45
TFF1-201ENST00000291527 PHF14O94880 888 aa12.23□□□□□ -0.45
TFF1-201ENST00000291527 POLD1P28340 1107 aa12.23□□□□□ -0.45
TFF1-201ENST00000291527 CDCA8Q53HL2 280 aa12.23□□□□□ -0.45
TFF1-201ENST00000291527 SLC4A9Q96Q91 983 aa12.23□□□□□ -0.45
TFF1-201ENST00000291527 PANK3Q9H999 370 aa12.23□□□□□ -0.45
TFF1-201ENST00000291527 MYH14Q7Z406 1995 aaKnown RBP12.23□□□□□ -0.45
TFF1-201ENST00000291527 PHKG2P15735 406 aa12.22□□□□□ -0.45
TFF1-201ENST00000291527 ATG3Q9NT62 314 aa12.22□□□□□ -0.45
TFF1-201ENST00000291527 AEBP1Q8IUX7 1158 aa12.21□□□□□ -0.45
TFF1-201ENST00000291527 LOC102724428A0A0B4J2F2 783 aa12.2□□□□□ -0.46
TFF1-201ENST00000291527 SIK1P57059 783 aa12.2□□□□□ -0.46
TFF1-201ENST00000291527 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.19□□□□□ -0.46
TFF1-201ENST00000291527 SPG7Q9UQ90 795 aa12.19□□□□□ -0.46
TFF1-201ENST00000291527 N4BP2Q86UW6 1770 aaPredicted RBP12.18□□□□□ -0.46
TFF1-201ENST00000291527 KIAA1551Q9HCM1 1747 aa12.18□□□□□ -0.46
TFF1-201ENST00000291527 AK7Q96M32 723 aa12.18□□□□□ -0.46
TFF1-201ENST00000291527 TIMELESSQ9UNS1 1208 aa12.18□□□□□ -0.46
TFF1-201ENST00000291527 KDM6AO15550 1401 aaPredicted RBP12.18□□□□□ -0.46
TFF1-201ENST00000291527 IGSF1Q8N6C5 1336 aa12.17□□□□□ -0.46
TFF1-201ENST00000291527 VIRMAQ69YN4 1812 aaKnown RBP12.17□□□□□ -0.46
TFF1-201ENST00000291527 IFNL2Q8IZJ0 200 aa12.17□□□□□ -0.46
TFF1-201ENST00000291527 SMARCC1Q92922 1105 aaPredicted RBP12.17□□□□□ -0.46
TFF1-201ENST00000291527 TMOD3Q9NYL9 352 aa12.17□□□□□ -0.46
TFF1-201ENST00000291527 COL5A3P25940 1745 aaPredicted RBP12.17□□□□□ -0.46
TFF1-201ENST00000291527 ATP6V1AP38606 617 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms