RNA–Protein interactions for RNA: ENST00000291300.8

HIF3A-203, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 5

Gene HIF3A, Length 2,101 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-203ENST00000291300 TWISTNBQ3B726 338 aaPredicted RBP21.45■■□□□ 1.02
HIF3A-203ENST00000291300 ALDH1L2Q3SY69 923 aa21.45■■□□□ 1.02
HIF3A-203ENST00000291300 ATF7IPQ6VMQ6 1270 aa21.45■■□□□ 1.02
HIF3A-203ENST00000291300 CENPQQ7L2Z9 268 aaPredicted RBP21.45■■□□□ 1.02
HIF3A-203ENST00000291300 AXIN2Q9Y2T1 843 aa21.45■■□□□ 1.02
HIF3A-203ENST00000291300 PCDHB15Q9Y5E8 787 aa21.45■■□□□ 1.02
HIF3A-203ENST00000291300 MVPQ14764 893 aaKnown RBP21.44■■□□□ 1.02
HIF3A-203ENST00000291300 CADPS2Q86UW7 1296 aa21.44■■□□□ 1.02
HIF3A-203ENST00000291300 MRPL50Q8N5N7 158 aaKnown RBP21.44■■□□□ 1.02
HIF3A-203ENST00000291300 MSH6P52701 1360 aa21.44■■□□□ 1.02
HIF3A-203ENST00000291300 FTSJ3Q8IY81 847 aaKnown RBP21.43■■□□□ 1.02
HIF3A-203ENST00000291300 RGPD5Q99666 1765 aa21.42■■□□□ 1.02
HIF3A-203ENST00000291300 ZC3H6P61129 1189 aaKnown RBP21.41■■□□□ 1.02
HIF3A-203ENST00000291300 TMEM57Q8N5G2 664 aa21.41■■□□□ 1.02
HIF3A-203ENST00000291300 GAS2L2Q8NHY3 880 aa21.41■■□□□ 1.02
HIF3A-203ENST00000291300 CABLES1Q8TDN4 633 aa21.41■■□□□ 1.02
HIF3A-203ENST00000291300 KIF16BQ96L93 1317 aa21.4■■□□□ 1.02
HIF3A-203ENST00000291300 RTF1Q92541 710 aaKnown RBP21.4■■□□□ 1.02
HIF3A-203ENST00000291300 PXDNQ92626 1479 aa21.39■■□□□ 1.01
HIF3A-203ENST00000291300 BRPF1P55201 1214 aaPredicted RBP21.38■■□□□ 1.01
HIF3A-203ENST00000291300 ITPRIPQ8IWB1 547 aa21.38■■□□□ 1.01
HIF3A-203ENST00000291300 IL17REQ8NFR9 667 aa21.38■■□□□ 1.01
HIF3A-203ENST00000291300 ANKRD24Q8TF21 1146 aa21.38■■□□□ 1.01
HIF3A-203ENST00000291300 ZNF428Q96B54 188 aa21.38■■□□□ 1.01
HIF3A-203ENST00000291300 LRRC37A3O60309 1634 aa21.38■■□□□ 1.01
HIF3A-203ENST00000291300 GNAT3A8MTJ3 354 aa21.37■■□□□ 1.01
HIF3A-203ENST00000291300 BRINP3Q76B58 766 aa21.37■■□□□ 1.01
HIF3A-203ENST00000291300 NPHP3Q7Z494 1330 aa21.36■■□□□ 1.01
HIF3A-203ENST00000291300 MAP3K5Q99683 1374 aa21.35■■□□□ 1.01
HIF3A-203ENST00000291300 IPO8O15397 1037 aaKnown RBP21.35■■□□□ 1.01
HIF3A-203ENST00000291300 TSPYL4Q9UJ04 414 aa21.35■■□□□ 1.01
HIF3A-203ENST00000291300 TNS3Q68CZ2 1445 aa21.34■■□□□ 1.01
HIF3A-203ENST00000291300 MS4A1P11836 297 aa21.34■■□□□ 1.01
HIF3A-203ENST00000291300 SPATA31A3Q5VYP0 1347 aa21.33■■□□□ 1
HIF3A-203ENST00000291300 KIAA0232Q92628 1395 aa21.33■■□□□ 1
HIF3A-203ENST00000291300 HTATSF1O43719 755 aaKnown RBP21.32■■□□□ 1
HIF3A-203ENST00000291300 NCAPD2Q15021 1401 aa21.32■■□□□ 1
HIF3A-203ENST00000291300 CRYBG1Q9Y4K1 1723 aa21.32■■□□□ 1
HIF3A-203ENST00000291300 RGS3P49796 1198 aa21.31■■□□□ 1
HIF3A-203ENST00000291300 LGR6Q9HBX8 967 aa21.31■■□□□ 1
HIF3A-203ENST00000291300 SLAIN2Q9P270 581 aa21.31■■□□□ 1
HIF3A-203ENST00000291300 DDX19BQ9UMR2 479 aa21.31■■□□□ 1
HIF3A-203ENST00000291300 COL18A1P39060 1754 aa21.31■■□□□ 1
HIF3A-203ENST00000291300 CHRNA2Q15822 529 aa21.31■■□□□ 1
HIF3A-203ENST00000291300 CAMTA1Q9Y6Y1 1673 aa21.3■■□□□ 1
HIF3A-203ENST00000291300 ZBTB40Q9NUA8 1239 aa21.3■■□□□ 1
HIF3A-203ENST00000291300 ERBB3P21860 1342 aa21.3■■□□□ 1
HIF3A-203ENST00000291300 PDE4AP27815 886 aa21.29■■□□□ 1
HIF3A-203ENST00000291300 AAMPQ13685 434 aa21.29■■□□□ 1
HIF3A-203ENST00000291300 ARHGAP45Q92619 1136 aa21.29■■□□□ 1
HIF3A-203ENST00000291300 ABCC4O15439 1325 aa21.28■■□□□ 1
HIF3A-203ENST00000291300 RGS12O14924 1447 aa21.27■■□□□ 1
HIF3A-203ENST00000291300 CEMIPQ8WUJ3 1361 aa21.26■□□□□ 0.99
HIF3A-203ENST00000291300 ZNF530Q6P9A1 599 aaPredicted RBP21.26■□□□□ 0.99
HIF3A-203ENST00000291300 BACH2Q9BYV9 841 aa21.26■□□□□ 0.99
HIF3A-203ENST00000291300 LMO7Q8WWI1 1683 aa21.26■□□□□ 0.99
HIF3A-203ENST00000291300 ZBTB7BO15156 539 aaPredicted RBP21.25■□□□□ 0.99
HIF3A-203ENST00000291300 TAF7Q15545 349 aaPredicted RBP21.25■□□□□ 0.99
HIF3A-203ENST00000291300 MPRIPQ6WCQ1 1025 aa21.25■□□□□ 0.99
HIF3A-203ENST00000291300 G2E3Q7L622 706 aa21.25■□□□□ 0.99
HIF3A-203ENST00000291300 C1orf115Q9H7X2 142 aa21.25■□□□□ 0.99
HIF3A-203ENST00000291300 SLC4A2P04920 1241 aa21.23■□□□□ 0.99
HIF3A-203ENST00000291300 NECTIN2Q92692 538 aa21.23■□□□□ 0.99
HIF3A-203ENST00000291300 RWDD1Q9H446 243 aaPredicted RBP21.23■□□□□ 0.99
HIF3A-203ENST00000291300 VIRMAQ69YN4 1812 aaKnown RBP21.23■□□□□ 0.99
HIF3A-203ENST00000291300 SOS2Q07890 1332 aaPredicted RBP21.23■□□□□ 0.99
HIF3A-203ENST00000291300 FAM208AQ9UK61 1670 aaKnown RBP21.23■□□□□ 0.99
HIF3A-203ENST00000291300 KCNQ3O43525 872 aa21.23■□□□□ 0.99
HIF3A-203ENST00000291300 PLEKHO1Q53GL0 409 aaPredicted RBP21.23■□□□□ 0.99
HIF3A-203ENST00000291300 NLRP2Q9NX02 1062 aa21.23■□□□□ 0.99
HIF3A-203ENST00000291300 PDZRN3Q9UPQ7 1066 aa21.22■□□□□ 0.99
HIF3A-203ENST00000291300 MSH5O43196 834 aa21.22■□□□□ 0.99
HIF3A-203ENST00000291300 AKAP4Q5JQC9 854 aa21.22■□□□□ 0.99
HIF3A-203ENST00000291300 API5Q9BZZ5 524 aaKnown RBP21.22■□□□□ 0.99
HIF3A-203ENST00000291300 HDAC1Q13547 482 aaPredicted RBP21.19■□□□□ 0.98
HIF3A-203ENST00000291300 AMOTQ4VCS5 1084 aa21.19■□□□□ 0.98
HIF3A-203ENST00000291300 MEGF6O75095 1541 aa21.18■□□□□ 0.98
HIF3A-203ENST00000291300 RNMTO43148 476 aaKnown RBP21.18■□□□□ 0.98
HIF3A-203ENST00000291300 C8orf34Q49A92 452 aa21.18■□□□□ 0.98
HIF3A-203ENST00000291300 KDM3BQ7LBC6 1761 aa21.18■□□□□ 0.98
HIF3A-203ENST00000291300 CPDO75976 1380 aa21.18■□□□□ 0.98
HIF3A-203ENST00000291300 CSB-PGBD3P0DP91 1061 aa21.17■□□□□ 0.98
HIF3A-203ENST00000291300 F6X3S4 739 aa21.17■□□□□ 0.98
HIF3A-203ENST00000291300 HAP1P54257 671 aaPredicted RBP21.17■□□□□ 0.98
HIF3A-203ENST00000291300 C1orf141Q5JVX7 400 aa21.16■□□□□ 0.98
HIF3A-203ENST00000291300 INTS3Q68E01 1043 aaKnown RBP21.16■□□□□ 0.98
HIF3A-203ENST00000291300 SIRT2Q8IXJ6 389 aa21.16■□□□□ 0.98
HIF3A-203ENST00000291300 BABAM1Q9NWV8 329 aa21.16■□□□□ 0.98
HIF3A-203ENST00000291300 EIF4A1P60842 406 aaKnown RBP21.15■□□□□ 0.98
HIF3A-203ENST00000291300 ABCA3Q99758 1704 aa21.15■□□□□ 0.98
HIF3A-203ENST00000291300 PTPRCP08575 1304 aa21.14■□□□□ 0.98
HIF3A-203ENST00000291300 TEFQ10587 303 aa21.14■□□□□ 0.97
HIF3A-203ENST00000291300 NHSL1Q5SYE7 1610 aa21.14■□□□□ 0.97
HIF3A-203ENST00000291300 BTBD11A6QL63 1104 aa21.13■□□□□ 0.97
HIF3A-203ENST00000291300 NPM2Q86SE8 214 aaKnown RBP21.13■□□□□ 0.97
HIF3A-203ENST00000291300 SMC5Q8IY18 1101 aa21.13■□□□□ 0.97
HIF3A-203ENST00000291300 RAPGEF4Q8WZA2 1011 aa21.13■□□□□ 0.97
HIF3A-203ENST00000291300 PRDM11Q9NQV5 511 aa21.13■□□□□ 0.97
HIF3A-203ENST00000291300 FAM161AQ3B820 660 aa21.12■□□□□ 0.97
HIF3A-203ENST00000291300 SIPA1L3O60292 1781 aaPredicted RBP21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms