RNA–Protein interactions for RNA: ENST00000290418.4

CCDC142-201, Transcript of coiled-coil domain containing 142, humanhuman

APPRIS P2 TSL 2 BASIC

Gene CCDC142, Length 2,835 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC142-201ENST00000290418 CEP170BQ9Y4F5 1589 aaPredicted RBP21.47■■□□□ 1.03
CCDC142-201ENST00000290418 SLC4A2P04920 1241 aa21.47■■□□□ 1.03
CCDC142-201ENST00000290418 ESCO1Q5FWF5 840 aa21.47■■□□□ 1.03
CCDC142-201ENST00000290418 RTF1Q92541 710 aaKnown RBP21.47■■□□□ 1.03
CCDC142-201ENST00000290418 CHL1O00533 1208 aa21.47■■□□□ 1.03
CCDC142-201ENST00000290418 ARHGAP23Q9P227 1491 aa21.47■■□□□ 1.03
CCDC142-201ENST00000290418 TOPAZ1Q8N9V7 1692 aa21.46■■□□□ 1.03
CCDC142-201ENST00000290418 NUCB1Q02818 461 aa21.46■■□□□ 1.03
CCDC142-201ENST00000290418 BECN1Q14457 450 aa21.46■■□□□ 1.03
CCDC142-201ENST00000290418 UPF2Q9HAU5 1272 aaKnown RBP21.46■■□□□ 1.03
CCDC142-201ENST00000290418 C16orf71Q8IYS4 520 aaPredicted RBP21.46■■□□□ 1.03
CCDC142-201ENST00000290418 FAM43AQ8N2R8 423 aa21.46■■□□□ 1.03
CCDC142-201ENST00000290418 ABCC4O15439 1325 aa21.45■■□□□ 1.03
CCDC142-201ENST00000290418 SLIT1O75093 1534 aa21.45■■□□□ 1.02
CCDC142-201ENST00000290418 TBC1D32Q96NH3 1257 aa21.45■■□□□ 1.02
CCDC142-201ENST00000290418 USP31Q70CQ4 1352 aa21.44■■□□□ 1.02
CCDC142-201ENST00000290418 HOXC9P31274 260 aa21.44■■□□□ 1.02
CCDC142-201ENST00000290418 TBC1D2Q9BYX2 928 aa21.44■■□□□ 1.02
CCDC142-201ENST00000290418 FLT4P35916 1363 aa21.44■■□□□ 1.02
CCDC142-201ENST00000290418 MEIS3Q99687 375 aa21.43■■□□□ 1.02
CCDC142-201ENST00000290418 VIRMAQ69YN4 1812 aaKnown RBP21.43■■□□□ 1.02
CCDC142-201ENST00000290418 SMARCA5O60264 1052 aaPredicted RBP21.42■■□□□ 1.02
CCDC142-201ENST00000290418 OTUD7AQ8TE49 926 aaPredicted RBP21.42■■□□□ 1.02
CCDC142-201ENST00000290418 ORAI2Q96SN7 254 aa21.42■■□□□ 1.02
CCDC142-201ENST00000290418 PTCH1Q13635 1447 aa21.42■■□□□ 1.02
CCDC142-201ENST00000290418 TTC21AQ8NDW8 1320 aa21.42■■□□□ 1.02
CCDC142-201ENST00000290418 PANK2Q9BZ23 570 aa21.42■■□□□ 1.02
CCDC142-201ENST00000290418 C22orf23Q9BZE7 217 aa21.42■■□□□ 1.02
CCDC142-201ENST00000290418 PHF8Q9UPP1 1060 aa21.41■■□□□ 1.02
CCDC142-201ENST00000290418 SBNO1A3KN83 1393 aa21.41■■□□□ 1.02
CCDC142-201ENST00000290418 ANKLE2Q86XL3 938 aa21.41■■□□□ 1.02
CCDC142-201ENST00000290418 LRRC59Q96AG4 307 aaKnown RBP21.41■■□□□ 1.02
CCDC142-201ENST00000290418 ZNF428Q96B54 188 aa21.41■■□□□ 1.02
CCDC142-201ENST00000290418 API5Q9BZZ5 524 aaKnown RBP21.41■■□□□ 1.02
CCDC142-201ENST00000290418 ANTXR1Q9H6X2 564 aa21.41■■□□□ 1.02
CCDC142-201ENST00000290418 PIK3C2AO00443 1686 aa21.4■■□□□ 1.02
CCDC142-201ENST00000290418 MSH6P52701 1360 aa21.4■■□□□ 1.02
CCDC142-201ENST00000290418 BRPF1P55201 1214 aaPredicted RBP21.4■■□□□ 1.02
CCDC142-201ENST00000290418 ARHGAP45Q92619 1136 aa21.4■■□□□ 1.02
CCDC142-201ENST00000290418 PIK3R4Q99570 1358 aa21.39■■□□□ 1.01
CCDC142-201ENST00000290418 PSME1Q06323 249 aa21.39■■□□□ 1.01
CCDC142-201ENST00000290418 CRB1P82279 1406 aa21.39■■□□□ 1.01
CCDC142-201ENST00000290418 IGSF1Q8N6C5 1336 aa21.37■■□□□ 1.01
CCDC142-201ENST00000290418 IL17REQ8NFR9 667 aa21.37■■□□□ 1.01
CCDC142-201ENST00000290418 UBE2Q2Q8WVN8 375 aa21.37■■□□□ 1.01
CCDC142-201ENST00000290418 DDX17Q92841 729 aaKnown RBP21.36■■□□□ 1.01
CCDC142-201ENST00000290418 RGS12O14924 1447 aa21.35■■□□□ 1.01
CCDC142-201ENST00000290418 XRCC6P12956 609 aaKnown RBP eCLIP21.35■■□□□ 1.01
CCDC142-201ENST00000290418 NALCNQ8IZF0 1738 aa21.35■■□□□ 1.01
CCDC142-201ENST00000290418 ARHGEF10O15013 1369 aa21.34■■□□□ 1.01
CCDC142-201ENST00000290418 NBPF6Q5VWK0 638 aa21.34■■□□□ 1.01
CCDC142-201ENST00000290418 NBPF4Q96M43 638 aa21.34■■□□□ 1.01
CCDC142-201ENST00000290418 FOXD4L1Q9NU39 408 aa21.34■■□□□ 1.01
CCDC142-201ENST00000290418 TSHZ3Q63HK5 1081 aa21.33■■□□□ 1.01
CCDC142-201ENST00000290418 LGR6Q9HBX8 967 aa21.33■■□□□ 1.01
CCDC142-201ENST00000290418 GNAT3A8MTJ3 354 aa21.33■■□□□ 1
CCDC142-201ENST00000290418 ANXA1P04083 346 aa21.33■■□□□ 1
CCDC142-201ENST00000290418 EIF2S2P20042 333 aaKnown RBP21.33■■□□□ 1
CCDC142-201ENST00000290418 RBM42Q9BTD8 480 aaKnown RBP21.32■■□□□ 1
CCDC142-201ENST00000290418 RGPD1P0DJD0 1748 aa21.32■■□□□ 1
CCDC142-201ENST00000290418 FKBP5Q13451 457 aaPredicted RBP21.32■■□□□ 1
CCDC142-201ENST00000290418 KCNQ3O43525 872 aa21.31■■□□□ 1
CCDC142-201ENST00000290418 GSPT1P15170 499 aaKnown RBP21.31■■□□□ 1
CCDC142-201ENST00000290418 GAS2L2Q8NHY3 880 aa21.31■■□□□ 1
CCDC142-201ENST00000290418 GCC1Q96CN9 775 aa21.31■■□□□ 1
CCDC142-201ENST00000290418 XRN1Q8IZH2 1706 aaKnown RBP21.31■■□□□ 1
CCDC142-201ENST00000290418 INTS3Q68E01 1043 aaKnown RBP21.31■■□□□ 1
CCDC142-201ENST00000290418 CEP85Q6P2H3 762 aa21.31■■□□□ 1
CCDC142-201ENST00000290418 TBC1D9Q6ZT07 1266 aa21.3■■□□□ 1
CCDC142-201ENST00000290418 FMN2Q9NZ56 1722 aa21.3■■□□□ 1
CCDC142-201ENST00000290418 KDRP35968 1356 aa21.29■■□□□ 1
CCDC142-201ENST00000290418 GOLGA6L3A6NEY3 463 aa21.29■■□□□ 1
CCDC142-201ENST00000290418 PHAXQ9H814 394 aaKnown RBP21.28■■□□□ 1
CCDC142-201ENST00000290418 EXOC6BQ9Y2D4 811 aa21.28■■□□□ 1
CCDC142-201ENST00000290418 MCM4P33991 863 aa21.28■■□□□ 1
CCDC142-201ENST00000290418 L1TD1Q5T7N2 865 aaKnown RBP21.28■■□□□ 1
CCDC142-201ENST00000290418 MPRIPQ6WCQ1 1025 aa21.28■■□□□ 1
CCDC142-201ENST00000290418 NAP1L5Q96NT1 182 aaPredicted RBP21.28■■□□□ 1
CCDC142-201ENST00000290418 RTL1A6NKG5 1358 aa21.27■■□□□ 1
CCDC142-201ENST00000290418 PLEKHM2Q8IWE5 1019 aa21.27■■□□□ 1
CCDC142-201ENST00000290418 CD2BP2O95400 341 aaKnown RBP21.26■□□□□ 0.99
CCDC142-201ENST00000290418 STK31Q9BXU1 1019 aa21.26■□□□□ 0.99
CCDC142-201ENST00000290418 ATP10DQ9P241 1426 aa21.26■□□□□ 0.99
CCDC142-201ENST00000290418 FLIIQ13045 1269 aa21.26■□□□□ 0.99
CCDC142-201ENST00000290418 BMP2KLQ5H9B9 411 aa21.26■□□□□ 0.99
CCDC142-201ENST00000290418 ANKRD44Q8N8A2 993 aa21.26■□□□□ 0.99
CCDC142-201ENST00000290418 ZC3H6P61129 1189 aaKnown RBP21.25■□□□□ 0.99
CCDC142-201ENST00000290418 DCTPP1Q9H773 170 aa21.25■□□□□ 0.99
CCDC142-201ENST00000290418 KIAA0232Q92628 1395 aa21.25■□□□□ 0.99
CCDC142-201ENST00000290418 TRAK2O60296 914 aa21.24■□□□□ 0.99
CCDC142-201ENST00000290418 AXIN2Q9Y2T1 843 aa21.24■□□□□ 0.99
CCDC142-201ENST00000290418 CHMP4BQ9H444 224 aaKnown RBP21.23■□□□□ 0.99
CCDC142-201ENST00000290418 MARF1Q9Y4F3 1742 aaKnown RBP21.23■□□□□ 0.99
CCDC142-201ENST00000290418 MAP3K5Q99683 1374 aa21.23■□□□□ 0.99
CCDC142-201ENST00000290418 ANKARQ7Z5J8 1434 aa21.22■□□□□ 0.99
CCDC142-201ENST00000290418 NWD1Q149M9 1564 aa21.22■□□□□ 0.99
CCDC142-201ENST00000290418 PROSER2Q86WR7 435 aaPredicted RBP21.22■□□□□ 0.99
CCDC142-201ENST00000290418 PNMA6EA0A0J9YXQ4 647 aa21.22■□□□□ 0.99
CCDC142-201ENST00000290418 PTPRCP08575 1304 aa21.22■□□□□ 0.99
CCDC142-201ENST00000290418 GCP02774 474 aa21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms