RNA–Protein interactions for RNA: ENST00000286835.11

SCAF4-201, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCAF4, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-201ENST00000286835 MBD3O95983 291 aa16.24■□□□□ 0.19
SCAF4-201ENST00000286835 RPAP2Q8IXW5 612 aaPredicted RBP16.24■□□□□ 0.19
SCAF4-201ENST00000286835 CHAF1AQ13111 956 aaPredicted RBP16.24■□□□□ 0.19
SCAF4-201ENST00000286835 AEBP1Q8IUX7 1158 aa16.24■□□□□ 0.19
SCAF4-201ENST00000286835 ABTB2Q8N961 1025 aa16.24■□□□□ 0.19
SCAF4-201ENST00000286835 NCKAP5LQ9HCH0 1330 aa16.24■□□□□ 0.19
SCAF4-201ENST00000286835 LAMC1P11047 1609 aa16.24■□□□□ 0.19
SCAF4-201ENST00000286835 EIF2S2P20042 333 aaKnown RBP16.23■□□□□ 0.19
SCAF4-201ENST00000286835 ZNF330Q9Y3S2 320 aaPredicted RBP16.23■□□□□ 0.19
SCAF4-201ENST00000286835 ZMYM3Q14202 1370 aa16.23■□□□□ 0.19
SCAF4-201ENST00000286835 ATF3P18847 181 aa16.23■□□□□ 0.19
SCAF4-201ENST00000286835 KIF2CQ99661 725 aa16.23■□□□□ 0.19
SCAF4-201ENST00000286835 ARHGAP45Q92619 1136 aa16.23■□□□□ 0.19
SCAF4-201ENST00000286835 VPS37CA5D8V6 355 aaPredicted RBP16.22■□□□□ 0.19
SCAF4-201ENST00000286835 NUDT16Q96DE0 195 aaKnown RBP16.22■□□□□ 0.19
SCAF4-201ENST00000286835 TMX3Q96JJ7 454 aa16.22■□□□□ 0.19
SCAF4-201ENST00000286835 DCTPP1Q9H773 170 aa16.22■□□□□ 0.19
SCAF4-201ENST00000286835 LMBRD1Q9NUN5 540 aa16.22■□□□□ 0.19
SCAF4-201ENST00000286835 CCDC61Q9Y6R9 512 aa16.22■□□□□ 0.19
SCAF4-201ENST00000286835 OFD1O75665 1012 aa16.22■□□□□ 0.19
SCAF4-201ENST00000286835 DDX54Q8TDD1 881 aaKnown RBP16.21■□□□□ 0.19
SCAF4-201ENST00000286835 SPC24Q8NBT2 197 aa16.21■□□□□ 0.19
SCAF4-201ENST00000286835 USP25Q9UHP3 1055 aa16.21■□□□□ 0.19
SCAF4-201ENST00000286835 SBNO2Q9Y2G9 1366 aa16.21■□□□□ 0.19
SCAF4-201ENST00000286835 AMOTL2Q9Y2J4 779 aa16.2■□□□□ 0.18
SCAF4-201ENST00000286835 GNAI2P04899 355 aa16.2■□□□□ 0.18
SCAF4-201ENST00000286835 ANKRD44Q8N8A2 993 aa16.2■□□□□ 0.18
SCAF4-201ENST00000286835 ATP7AQ04656 1500 aa16.2■□□□□ 0.18
SCAF4-201ENST00000286835 NUTM1Q86Y26 1132 aa16.2■□□□□ 0.18
SCAF4-201ENST00000286835 LRRCC1Q9C099 1032 aa16.2■□□□□ 0.18
SCAF4-201ENST00000286835 CCDC9Q9Y3X0 531 aaKnown RBP16.2■□□□□ 0.18
SCAF4-201ENST00000286835 TMEM63CQ9P1W3 806 aa16.19■□□□□ 0.18
SCAF4-201ENST00000286835 NAP1L2Q9ULW6 460 aaPredicted RBP16.19■□□□□ 0.18
SCAF4-201ENST00000286835 SURF6O75683 361 aaKnown RBP16.19■□□□□ 0.18
SCAF4-201ENST00000286835 CEP85Q6P2H3 762 aa16.19■□□□□ 0.18
SCAF4-201ENST00000286835 PLXNC1O60486 1568 aa16.19■□□□□ 0.18
SCAF4-201ENST00000286835 LRSAM1Q6UWE0 723 aa16.19■□□□□ 0.18
SCAF4-201ENST00000286835 SMC3Q9UQE7 1217 aa16.19■□□□□ 0.18
SCAF4-201ENST00000286835 FAM177BA6PVY3 158 aa16.18■□□□□ 0.18
SCAF4-201ENST00000286835 FGD1P98174 961 aa16.17■□□□□ 0.18
SCAF4-201ENST00000286835 GPT2Q8TD30 523 aa16.17■□□□□ 0.18
SCAF4-201ENST00000286835 ZKSCAN5Q9Y2L8 839 aa16.17■□□□□ 0.18
SCAF4-201ENST00000286835 IQGAP1P46940 1657 aa16.17■□□□□ 0.18
SCAF4-201ENST00000286835 ABCC1P33527 1531 aa16.17■□□□□ 0.18
SCAF4-201ENST00000286835 MX1P20591 662 aa16.16■□□□□ 0.18
SCAF4-201ENST00000286835 PDE1AP54750 535 aa16.16■□□□□ 0.18
SCAF4-201ENST00000286835 PPP1R9BQ96SB3 815 aa16.16■□□□□ 0.18
SCAF4-201ENST00000286835 PPP6R1Q9UPN7 881 aa16.16■□□□□ 0.18
SCAF4-201ENST00000286835 NSFL1CQ9UNZ2 370 aaKnown RBP16.16■□□□□ 0.18
SCAF4-201ENST00000286835 UBTFL1P0CB47 393 aaPredicted RBP16.16■□□□□ 0.18
SCAF4-201ENST00000286835 DIAPH3Q9NSV4 1193 aa16.16■□□□□ 0.18
SCAF4-201ENST00000286835 NPATQ14207 1427 aa16.15■□□□□ 0.18
SCAF4-201ENST00000286835 ZNF445P59923 1031 aa16.15■□□□□ 0.18
SCAF4-201ENST00000286835 MCM2P49736 904 aa16.15■□□□□ 0.18
SCAF4-201ENST00000286835 TTC12Q9H892 705 aaPredicted RBP16.15■□□□□ 0.18
SCAF4-201ENST00000286835 YEATS2Q9ULM3 1422 aa16.15■□□□□ 0.18
SCAF4-201ENST00000286835 TNRQ92752 1358 aa16.15■□□□□ 0.18
SCAF4-201ENST00000286835 TSC1Q92574 1164 aa16.15■□□□□ 0.18
SCAF4-201ENST00000286835 HCLS1P14317 486 aaPredicted RBP16.14■□□□□ 0.17
SCAF4-201ENST00000286835 C17orf53Q8N3J3 647 aaPredicted RBP16.14■□□□□ 0.17
SCAF4-201ENST00000286835 MAP3K4Q9Y6R4 1608 aa16.14■□□□□ 0.17
SCAF4-201ENST00000286835 G2E3Q7L622 706 aa16.14■□□□□ 0.17
SCAF4-201ENST00000286835 MAP7D2Q96T17 732 aa16.14■□□□□ 0.17
SCAF4-201ENST00000286835 NOL7Q9UMY1 257 aaKnown RBP16.14■□□□□ 0.17
SCAF4-201ENST00000286835 ABCA6Q8N139 1617 aa16.14■□□□□ 0.17
SCAF4-201ENST00000286835 RNF17Q9BXT8 1623 aaKnown RBP16.14■□□□□ 0.17
SCAF4-201ENST00000286835 UHRF1BP1LA0JNW5 1464 aa16.14■□□□□ 0.17
SCAF4-201ENST00000286835 SPHKAPQ2M3C7 1700 aa16.14■□□□□ 0.17
SCAF4-201ENST00000286835 CWC27Q6UX04 472 aaKnown RBP16.14■□□□□ 0.17
SCAF4-201ENST00000286835 FOXO3O43524 673 aa16.13■□□□□ 0.17
SCAF4-201ENST00000286835 WDR33Q9C0J8 1336 aaKnown RBP16.13■□□□□ 0.17
SCAF4-201ENST00000286835 HSP90AB2PQ58FF8 381 aa16.13■□□□□ 0.17
SCAF4-201ENST00000286835 MSH6P52701 1360 aa16.13■□□□□ 0.17
SCAF4-201ENST00000286835 MYOM2P54296 1465 aa16.13■□□□□ 0.17
SCAF4-201ENST00000286835 ABCC4O15439 1325 aa16.13■□□□□ 0.17
SCAF4-201ENST00000286835 WASLO00401 505 aaPredicted RBP16.12■□□□□ 0.17
SCAF4-201ENST00000286835 GNAI3P08754 354 aa16.12■□□□□ 0.17
SCAF4-201ENST00000286835 CCT4P50991 539 aaKnown RBP16.12■□□□□ 0.17
SCAF4-201ENST00000286835 TEFQ10587 303 aa16.12■□□□□ 0.17
SCAF4-201ENST00000286835 ZNF592Q92610 1267 aa16.12■□□□□ 0.17
SCAF4-201ENST00000286835 SASS6Q6UVJ0 657 aa16.12■□□□□ 0.17
SCAF4-201ENST00000286835 USP48Q86UV5 1035 aa16.12■□□□□ 0.17
SCAF4-201ENST00000286835 LRRFIP2Q9Y608 721 aaKnown RBP16.12■□□□□ 0.17
SCAF4-201ENST00000286835 IQSEC2Q5JU85 1478 aa16.12■□□□□ 0.17
SCAF4-201ENST00000286835 FERMT3Q86UX7 667 aa16.12■□□□□ 0.17
SCAF4-201ENST00000286835 NLRP2Q9NX02 1062 aa16.12■□□□□ 0.17
SCAF4-201ENST00000286835 IL13P35225 146 aa16.12■□□□□ 0.17
SCAF4-201ENST00000286835 PUS7Q96PZ0 661 aaKnown RBP16.12■□□□□ 0.17
SCAF4-201ENST00000286835 GADD45BO75293 160 aaPredicted RBP16.11■□□□□ 0.17
SCAF4-201ENST00000286835 DDIT3P35638 169 aa16.11■□□□□ 0.17
SCAF4-201ENST00000286835 ATP6V1DQ9Y5K8 247 aa16.11■□□□□ 0.17
SCAF4-201ENST00000286835 FOSBP53539 338 aa16.11■□□□□ 0.17
SCAF4-201ENST00000286835 ESYT1Q9BSJ8 1104 aa16.11■□□□□ 0.17
SCAF4-201ENST00000286835 ZHX1Q9UKY1 873 aaPredicted RBP16.11■□□□□ 0.17
SCAF4-201ENST00000286835 AK9Q5TCS8 1911 aa16.11■□□□□ 0.17
SCAF4-201ENST00000286835 CBX1P83916 185 aa16.11■□□□□ 0.17
SCAF4-201ENST00000286835 SPG7Q9UQ90 795 aa16.11■□□□□ 0.17
SCAF4-201ENST00000286835 CNPY2Q9Y2B0 182 aa16.11■□□□□ 0.17
SCAF4-201ENST00000286835 ZFYVE16Q7Z3T8 1539 aa16.1■□□□□ 0.17
SCAF4-201ENST00000286835 ADCY5O95622 1261 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms