RNA–Protein interactions for RNA: ENST00000285814.8

NIFK-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIFK, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFK-201ENST00000285814 NRAPQ86VF7 1730 aa23.88■■□□□ 1.41
NIFK-201ENST00000285814 DCTN1Q14203 1278 aa23.88■■□□□ 1.41
NIFK-201ENST00000285814 CRB1P82279 1406 aa23.88■■□□□ 1.41
NIFK-201ENST00000285814 PARP4Q9UKK3 1724 aaKnown RBP23.88■■□□□ 1.41
NIFK-201ENST00000285814 FANCIQ9NVI1 1328 aa23.88■■□□□ 1.41
NIFK-201ENST00000285814 GNAT3A8MTJ3 354 aa23.87■■□□□ 1.41
NIFK-201ENST00000285814 EVA1CP58658 441 aa23.87■■□□□ 1.41
NIFK-201ENST00000285814 LARP1Q6PKG0 1096 aaKnown RBP23.87■■□□□ 1.41
NIFK-201ENST00000285814 STRN4Q9NRL3 753 aa23.87■■□□□ 1.41
NIFK-201ENST00000285814 RCAN3Q9UKA8 241 aa23.87■■□□□ 1.41
NIFK-201ENST00000285814 NWD2Q9ULI1 1742 aa23.87■■□□□ 1.41
NIFK-201ENST00000285814 ADAMTS2O95450 1211 aa23.87■■□□□ 1.41
NIFK-201ENST00000285814 RTF1Q92541 710 aaKnown RBP23.87■■□□□ 1.41
NIFK-201ENST00000285814 IFT57Q9NWB7 429 aa23.87■■□□□ 1.41
NIFK-201ENST00000285814 NUTM2BA6NNL0 878 aaPredicted RBP23.86■■□□□ 1.41
NIFK-201ENST00000285814 NUTM2EB1AL46 878 aaPredicted RBP23.86■■□□□ 1.41
NIFK-201ENST00000285814 ZNF853P0CG23 659 aa23.86■■□□□ 1.41
NIFK-201ENST00000285814 TATP17735 454 aaPredicted RBP23.86■■□□□ 1.41
NIFK-201ENST00000285814 MCM10Q7L590 875 aa23.86■■□□□ 1.41
NIFK-201ENST00000285814 NUTM2AQ8IVF1 878 aaPredicted RBP23.86■■□□□ 1.41
NIFK-201ENST00000285814 SPATA31A6Q5VVP1 1343 aa23.85■■□□□ 1.41
NIFK-201ENST00000285814 HSPA1LP34931 641 aa23.85■■□□□ 1.41
NIFK-201ENST00000285814 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.85■■□□□ 1.417e-7■■■■□ 21.1
NIFK-201ENST00000285814 GNAI1P63096 354 aa23.84■■□□□ 1.41
NIFK-201ENST00000285814 ZNF530Q6P9A1 599 aaPredicted RBP23.84■■□□□ 1.41
NIFK-201ENST00000285814 OVOS2A0A0G2JMS6 1433 aa23.84■■□□□ 1.41
NIFK-201ENST00000285814 RNF123Q5XPI4 1314 aa23.84■■□□□ 1.41
NIFK-201ENST00000285814 TSR2Q969E8 191 aaKnown RBP23.84■■□□□ 1.41
NIFK-201ENST00000285814 CFAP44Q96MT7 982 aa23.84■■□□□ 1.41
NIFK-201ENST00000285814 GTF3C3Q9Y5Q9 886 aa23.84■■□□□ 1.41
NIFK-201ENST00000285814 AKAP4Q5JQC9 854 aa23.83■■□□□ 1.41
NIFK-201ENST00000285814 SLIT2O94813 1529 aa23.83■■□□□ 1.41
NIFK-201ENST00000285814 ADAMTS7Q9UKP4 1686 aa23.82■■□□□ 1.4
NIFK-201ENST00000285814 VIRMAQ69YN4 1812 aaKnown RBP23.81■■□□□ 1.4
NIFK-201ENST00000285814 CEMIPQ8WUJ3 1361 aa23.81■■□□□ 1.4
NIFK-201ENST00000285814 SPG7Q9UQ90 795 aa23.81■■□□□ 1.4
NIFK-201ENST00000285814 LRP6O75581 1613 aa23.81■■□□□ 1.4
NIFK-201ENST00000285814 IL17REQ8NFR9 667 aa23.8■■□□□ 1.4
NIFK-201ENST00000285814 C1orf141Q5JVX7 400 aa23.79■■□□□ 1.4
NIFK-201ENST00000285814 MBIPQ9NS73 344 aa23.79■■□□□ 1.4
NIFK-201ENST00000285814 LAS1LQ9Y4W2 734 aaKnown RBP23.79■■□□□ 1.4
NIFK-201ENST00000285814 WNK3Q9BYP7 1800 aa23.78■■□□□ 1.4
NIFK-201ENST00000285814 CHL1O00533 1208 aa23.78■■□□□ 1.4
NIFK-201ENST00000285814 CT47B1P0C2W7 299 aaPredicted RBP23.78■■□□□ 1.4
NIFK-201ENST00000285814 IL2RBP14784 551 aa23.78■■□□□ 1.4
NIFK-201ENST00000285814 EXOSC9Q06265 439 aaKnown RBP23.77■■□□□ 1.4
NIFK-201ENST00000285814 SHANK3Q9BYB0 1731 aa23.76■■□□□ 1.39
NIFK-201ENST00000285814 NEFLP07196 543 aa23.76■■□□□ 1.39
NIFK-201ENST00000285814 DISP2A7MBM2 1401 aa23.75■■□□□ 1.39
NIFK-201ENST00000285814 SCN11AQ9UI33 1791 aa23.75■■□□□ 1.39
NIFK-201ENST00000285814 PHKG2P15735 406 aa23.74■■□□□ 1.39
NIFK-201ENST00000285814 RRP1P56182 461 aaKnown RBP23.73■■□□□ 1.39
NIFK-201ENST00000285814 LGR6Q9HBX8 967 aa23.73■■□□□ 1.39
NIFK-201ENST00000285814 USP35Q9P2H5 1018 aa23.73■■□□□ 1.39
NIFK-201ENST00000285814 SIPA1L3O60292 1781 aaPredicted RBP23.73■■□□□ 1.39
NIFK-201ENST00000285814 RNMTO43148 476 aaKnown RBP23.73■■□□□ 1.39
NIFK-201ENST00000285814 MPRIPQ6WCQ1 1025 aa23.73■■□□□ 1.39
NIFK-201ENST00000285814 IFNL2Q8IZJ0 200 aa23.73■■□□□ 1.39
NIFK-201ENST00000285814 BABAM1Q9NWV8 329 aa23.73■■□□□ 1.39
NIFK-201ENST00000285814 CYP27B1O15528 508 aa23.72■■□□□ 1.39
NIFK-201ENST00000285814 ZCRB1Q8TBF4 217 aaKnown RBP23.72■■□□□ 1.39
NIFK-201ENST00000285814 C8orf37Q96NL8 207 aa23.72■■□□□ 1.39
NIFK-201ENST00000285814 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.72■■□□□ 1.39
NIFK-201ENST00000285814 KDM6AO15550 1401 aaPredicted RBP23.72■■□□□ 1.39
NIFK-201ENST00000285814 SPATA31A1Q5TZJ5 1347 aa23.71■■□□□ 1.39
NIFK-201ENST00000285814 PCDH11XQ9BZA7 1347 aa23.71■■□□□ 1.39
NIFK-201ENST00000285814 PCDH11YQ9BZA8 1340 aa23.71■■□□□ 1.39
NIFK-201ENST00000285814 BCL9LQ86UU0 1499 aa23.71■■□□□ 1.39
NIFK-201ENST00000285814 TAF7Q15545 349 aaPredicted RBP23.7■■□□□ 1.39
NIFK-201ENST00000285814 FNBP4Q8N3X1 1017 aaPredicted RBP23.7■■□□□ 1.39
NIFK-201ENST00000285814 RARSP54136 660 aaKnown RBP23.7■■□□□ 1.38
NIFK-201ENST00000285814 UNC5CLQ8IV45 518 aa23.7■■□□□ 1.38
NIFK-201ENST00000285814 NGLY1Q96IV0 654 aa23.7■■□□□ 1.38
NIFK-201ENST00000285814 TSPYL4Q9UJ04 414 aa23.7■■□□□ 1.38
NIFK-201ENST00000285814 THRAP3Q9Y2W1 955 aaKnown RBP23.7■■□□□ 1.38
NIFK-201ENST00000285814 SPATA31A5Q5VU36 1347 aa23.69■■□□□ 1.38
NIFK-201ENST00000285814 SPATA31A7Q8IWB4 1347 aa23.69■■□□□ 1.38
NIFK-201ENST00000285814 KDM3BQ7LBC6 1761 aa23.69■■□□□ 1.38
NIFK-201ENST00000285814 FKBP8Q14318 412 aa23.69■■□□□ 1.38
NIFK-201ENST00000285814 HSP90AB1P08238 724 aaKnown RBP23.68■■□□□ 1.38
NIFK-201ENST00000285814 MRC1P22897 1456 aa23.68■■□□□ 1.38
NIFK-201ENST00000285814 TEFQ10587 303 aa23.67■■□□□ 1.38
NIFK-201ENST00000285814 ZNF428Q96B54 188 aa23.67■■□□□ 1.38
NIFK-201ENST00000285814 MIS18AQ9NYP9 233 aa23.67■■□□□ 1.38
NIFK-201ENST00000285814 BCAR3O75815 825 aa23.67■■□□□ 1.38
NIFK-201ENST00000285814 DCAF5Q96JK2 942 aa23.67■■□□□ 1.38
NIFK-201ENST00000285814 TSPYL6Q8N831 410 aa23.66■■□□□ 1.38
NIFK-201ENST00000285814 C8orf58Q8NAV2 365 aa23.66■■□□□ 1.38
NIFK-201ENST00000285814 VAMP4O75379 141 aa23.65■■□□□ 1.38
NIFK-201ENST00000285814 CDCA7Q9BWT1 371 aaPredicted RBP23.65■■□□□ 1.38
NIFK-201ENST00000285814 IRX6P78412 446 aaPredicted RBP23.64■■□□□ 1.38
NIFK-201ENST00000285814 TWISTNBQ3B726 338 aaPredicted RBP23.64■■□□□ 1.38
NIFK-201ENST00000285814 NKX1-1Q15270 411 aaPredicted RBP23.64■■□□□ 1.37
NIFK-201ENST00000285814 VPS72Q15906 364 aa23.64■■□□□ 1.37
NIFK-201ENST00000285814 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.63■■□□□ 1.37
NIFK-201ENST00000285814 TNS2Q63HR2 1409 aa23.63■■□□□ 1.37
NIFK-201ENST00000285814 PLIN1O60240 522 aa23.62■■□□□ 1.37
NIFK-201ENST00000285814 ALDH1L2Q3SY69 923 aa23.62■■□□□ 1.37
NIFK-201ENST00000285814 MEX3CQ5U5Q3 659 aaKnown RBP23.62■■□□□ 1.37
NIFK-201ENST00000285814 BARGINQ6ZT62 677 aa23.62■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms