RNA–Protein interactions for RNA: ENST00000283290.9

ATG3-201, Transcript of autophagy related 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG3, Length 1,570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-201ENST00000283290 OVOS2A0A0G2JMS6 1433 aa23.42■■□□□ 1.34
ATG3-201ENST00000283290 NCAPD2Q15021 1401 aa23.42■■□□□ 1.34
ATG3-201ENST00000283290 FAM196AQ6ZSG2 479 aa23.41■■□□□ 1.34
ATG3-201ENST00000283290 CFAP53Q96M91 514 aa23.41■■□□□ 1.34
ATG3-201ENST00000283290 CCDC184Q52MB2 194 aa23.4■■□□□ 1.34
ATG3-201ENST00000283290 SULT6B1Q6IMI4 303 aa23.4■■□□□ 1.34
ATG3-201ENST00000283290 ANP32CO43423 234 aa23.39■■□□□ 1.33
ATG3-201ENST00000283290 RAPGEF4Q8WZA2 1011 aa23.39■■□□□ 1.33
ATG3-201ENST00000283290 CCDC125Q86Z20 511 aa23.38■■□□□ 1.33
ATG3-201ENST00000283290 TRIM37O94972 964 aa23.37■■□□□ 1.33
ATG3-201ENST00000283290 DDX54Q8TDD1 881 aaKnown RBP23.37■■□□□ 1.33
ATG3-201ENST00000283290 TATP17735 454 aaPredicted RBP23.36■■□□□ 1.33
ATG3-201ENST00000283290 PKD1L3Q7Z443 1732 aa23.36■■□□□ 1.33
ATG3-201ENST00000283290 KAT6BQ8WYB5 2073 aa23.36■■□□□ 1.33
ATG3-201ENST00000283290 SF3B2Q13435 895 aaKnown RBP23.34■■□□□ 1.33
ATG3-201ENST00000283290 ZCRB1Q8TBF4 217 aaKnown RBP23.34■■□□□ 1.33
ATG3-201ENST00000283290 U2AF1L5P0DN76 240 aaPredicted RBP23.33■■□□□ 1.33
ATG3-201ENST00000283290 U2AF1Q01081 240 aaKnown RBP eCLIP23.33■■□□□ 1.33
ATG3-201ENST00000283290 DEFB132Q7Z7B7 95 aa23.33■■□□□ 1.33
ATG3-201ENST00000283290 BCL9O00512 1426 aa23.32■■□□□ 1.32
ATG3-201ENST00000283290 DIEXFQ68CQ4 756 aaKnown RBP23.31■■□□□ 1.32
ATG3-201ENST00000283290 NHSQ6T4R5 1651 aa23.3■■□□□ 1.32
ATG3-201ENST00000283290 KDRP35968 1356 aa23.3■■□□□ 1.32
ATG3-201ENST00000283290 DOT1LQ8TEK3 1739 aa23.3■■□□□ 1.32
ATG3-201ENST00000283290 PTF1AQ7RTS3 328 aa23.3■■□□□ 1.32
ATG3-201ENST00000283290 NUDCQ9Y266 331 aa23.29■■□□□ 1.32
ATG3-201ENST00000283290 ACSBG1Q96GR2 724 aa23.27■■□□□ 1.32
ATG3-201ENST00000283290 CYP27B1O15528 508 aa23.27■■□□□ 1.32
ATG3-201ENST00000283290 APBA3O96018 575 aa23.27■■□□□ 1.32
ATG3-201ENST00000283290 PRKAR2BP31323 418 aa23.27■■□□□ 1.32
ATG3-201ENST00000283290 BAG6P46379 1132 aa23.27■■□□□ 1.32
ATG3-201ENST00000283290 PCDH11XQ9BZA7 1347 aa23.26■■□□□ 1.31
ATG3-201ENST00000283290 PCDH11YQ9BZA8 1340 aa23.26■■□□□ 1.31
ATG3-201ENST00000283290 KCNQ2O43526 872 aa23.26■■□□□ 1.31
ATG3-201ENST00000283290 EN1Q05925 392 aaPredicted RBP23.26■■□□□ 1.31
ATG3-201ENST00000283290 RSPH6AQ9H0K4 717 aa23.26■■□□□ 1.31
ATG3-201ENST00000283290 PHACTR3Q96KR7 559 aa23.25■■□□□ 1.31
ATG3-201ENST00000283290 TOGARAM1Q9Y4F4 1720 aa23.25■■□□□ 1.31
ATG3-201ENST00000283290 BTAF1O14981 1849 aa23.24■■□□□ 1.31
ATG3-201ENST00000283290 VIRMAQ69YN4 1812 aaKnown RBP23.24■■□□□ 1.31
ATG3-201ENST00000283290 BCL11BQ9C0K0 894 aaPredicted RBP23.24■■□□□ 1.31
ATG3-201ENST00000283290 MRS2Q9HD23 443 aa23.23■■□□□ 1.31
ATG3-201ENST00000283290 SPG7Q9UQ90 795 aa23.23■■□□□ 1.31
ATG3-201ENST00000283290 ZNF530Q6P9A1 599 aaPredicted RBP23.23■■□□□ 1.31
ATG3-201ENST00000283290 MTHFSDQ2M296 383 aaKnown RBP23.22■■□□□ 1.31
ATG3-201ENST00000283290 CCDC146Q8IYE0 955 aa23.22■■□□□ 1.31
ATG3-201ENST00000283290 RGPD3A6NKT7 1758 aaPredicted RBP23.21■■□□□ 1.31
ATG3-201ENST00000283290 RGPD4Q7Z3J3 1758 aa23.21■■□□□ 1.31
ATG3-201ENST00000283290 RREB1Q92766 1687 aa23.21■■□□□ 1.31
ATG3-201ENST00000283290 SENP3-EIF4A1A0A087X0R7 540 aa23.21■■□□□ 1.31
ATG3-201ENST00000283290 EZH2Q15910 746 aaKnown RBP23.21■■□□□ 1.31
ATG3-201ENST00000283290 PLEKHO1Q53GL0 409 aaPredicted RBP23.21■■□□□ 1.31
ATG3-201ENST00000283290 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.21■■□□□ 1.314e-11■■■■■ 34.8
ATG3-201ENST00000283290 PLEKHG2Q9H7P9 1386 aa23.2■■□□□ 1.3
ATG3-201ENST00000283290 PHKG2P15735 406 aa23.2■■□□□ 1.3
ATG3-201ENST00000283290 ITGB4P16144 1822 aa23.2■■□□□ 1.3
ATG3-201ENST00000283290 WDR43Q15061 677 aaKnown RBP eCLIP23.19■■□□□ 1.3
ATG3-201ENST00000283290 MIER1Q8N108 512 aa23.19■■□□□ 1.3
ATG3-201ENST00000283290 CAMKK2Q96RR4 588 aa23.19■■□□□ 1.3
ATG3-201ENST00000283290 ADAMTS8Q9UP79 889 aa23.19■■□□□ 1.3
ATG3-201ENST00000283290 DLG5Q8TDM6 1919 aa23.19■■□□□ 1.3
ATG3-201ENST00000283290 SYTL4Q96C24 671 aaPredicted RBP23.18■■□□□ 1.3
ATG3-201ENST00000283290 NUP188Q5SRE5 1749 aa23.17■■□□□ 1.3
ATG3-201ENST00000283290 FCHSD2O94868 740 aa23.17■■□□□ 1.3
ATG3-201ENST00000283290 PRIM1P49642 420 aaKnown RBP23.17■■□□□ 1.3
ATG3-201ENST00000283290 AMOTQ4VCS5 1084 aa23.16■■□□□ 1.3
ATG3-201ENST00000283290 MPRIPQ6WCQ1 1025 aa23.16■■□□□ 1.3
ATG3-201ENST00000283290 IFNL2Q8IZJ0 200 aa23.16■■□□□ 1.3
ATG3-201ENST00000283290 PLEKHF1Q96S99 279 aa23.16■■□□□ 1.3
ATG3-201ENST00000283290 SCN11AQ9UI33 1791 aa23.14■■□□□ 1.3
ATG3-201ENST00000283290 KDM6AO15550 1401 aaPredicted RBP23.14■■□□□ 1.3
ATG3-201ENST00000283290 PLSCR1O15162 318 aa23.14■■□□□ 1.29
ATG3-201ENST00000283290 NKX1-1Q15270 411 aaPredicted RBP23.14■■□□□ 1.29
ATG3-201ENST00000283290 C1orf141Q5JVX7 400 aa23.14■■□□□ 1.29
ATG3-201ENST00000283290 LGR6Q9HBX8 967 aa23.12■■□□□ 1.29
ATG3-201ENST00000283290 FAM9BQ8IZU0 186 aa23.11■■□□□ 1.29
ATG3-201ENST00000283290 PNISRQ8TF01 805 aaKnown RBP23.11■■□□□ 1.29
ATG3-201ENST00000283290 RRP7AQ9Y3A4 280 aaKnown RBP23.11■■□□□ 1.29
ATG3-201ENST00000283290 AKAP4Q5JQC9 854 aa23.1■■□□□ 1.29
ATG3-201ENST00000283290 LY75O60449 1722 aa23.09■■□□□ 1.29
ATG3-201ENST00000283290 MAPK8IP3Q9UPT6 1336 aa23.09■■□□□ 1.29
ATG3-201ENST00000283290 DCTN1Q14203 1278 aa23.09■■□□□ 1.29
ATG3-201ENST00000283290 PROM2Q8N271 834 aa23.09■■□□□ 1.29
ATG3-201ENST00000283290 NEUROD2Q15784 382 aa23.08■■□□□ 1.29
ATG3-201ENST00000283290 GAS2L2Q8NHY3 880 aa23.08■■□□□ 1.29
ATG3-201ENST00000283290 MAP3K5Q99683 1374 aa23.08■■□□□ 1.28
ATG3-201ENST00000283290 TXNRD1Q16881 649 aa23.06■■□□□ 1.28
ATG3-201ENST00000283290 MCM10Q7L590 875 aa23.06■■□□□ 1.28
ATG3-201ENST00000283290 DCAF5Q96JK2 942 aa23.06■■□□□ 1.28
ATG3-201ENST00000283290 GNAT3A8MTJ3 354 aa23.06■■□□□ 1.28
ATG3-201ENST00000283290 RNMTO43148 476 aaKnown RBP23.06■■□□□ 1.28
ATG3-201ENST00000283290 HSP90AB1P08238 724 aaKnown RBP23.06■■□□□ 1.28
ATG3-201ENST00000283290 NEFMP07197 916 aa23.05■■□□□ 1.28
ATG3-201ENST00000283290 IL17REQ8NFR9 667 aa23.05■■□□□ 1.28
ATG3-201ENST00000283290 PIGBQ92521 554 aa23.05■■□□□ 1.28
ATG3-201ENST00000283290 RUNDC1Q96C34 613 aa23.05■■□□□ 1.28
ATG3-201ENST00000283290 THUMPD2Q9BTF0 503 aaKnown RBP23.05■■□□□ 1.28
ATG3-201ENST00000283290 ADAMTS7Q9UKP4 1686 aa23.05■■□□□ 1.28
ATG3-201ENST00000283290 KCNQ4P56696 695 aa23.04■■□□□ 1.28
ATG3-201ENST00000283290 NFE2L2Q16236 605 aa23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms