RNA–Protein interactions for RNA: ENST00000282841.9

GGPS1-201, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GGPS1, Length 2,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-201ENST00000282841 IL16Q14005 1332 aa14.13□□□□□ -0.15
GGPS1-201ENST00000282841 ZNF853P0CG23 659 aa14.12□□□□□ -0.15
GGPS1-201ENST00000282841 LGR6Q9HBX8 967 aa14.12□□□□□ -0.15
GGPS1-201ENST00000282841 IFT57Q9NWB7 429 aa14.12□□□□□ -0.15
GGPS1-201ENST00000282841 DCCP43146 1447 aa14.12□□□□□ -0.15
GGPS1-201ENST00000282841 KIAA0232Q92628 1395 aa14.12□□□□□ -0.15
GGPS1-201ENST00000282841 IL17REQ8NFR9 667 aa14.12□□□□□ -0.15
GGPS1-201ENST00000282841 VAMP4O75379 141 aa14.12□□□□□ -0.15
GGPS1-201ENST00000282841 LMOD3Q0VAK6 560 aa14.12□□□□□ -0.15
GGPS1-201ENST00000282841 TWISTNBQ3B726 338 aaPredicted RBP14.12□□□□□ -0.15
GGPS1-201ENST00000282841 MPRIPQ6WCQ1 1025 aa14.12□□□□□ -0.15
GGPS1-201ENST00000282841 PKNOX2Q96KN3 472 aa14.12□□□□□ -0.15
GGPS1-201ENST00000282841 PXDNQ92626 1479 aa14.11□□□□□ -0.15
GGPS1-201ENST00000282841 RGPD5Q99666 1765 aa14.11□□□□□ -0.15
GGPS1-201ENST00000282841 GNAT3A8MTJ3 354 aa14.1□□□□□ -0.15
GGPS1-201ENST00000282841 TRIM27P14373 513 aa14.1□□□□□ -0.15
GGPS1-201ENST00000282841 PIP4K2BP78356 416 aa14.1□□□□□ -0.15
GGPS1-201ENST00000282841 TNS3Q68CZ2 1445 aa14.1□□□□□ -0.15
GGPS1-201ENST00000282841 NCBP3Q53F19 620 aaKnown RBP14.1□□□□□ -0.15
GGPS1-201ENST00000282841 USP35Q9P2H5 1018 aa14.1□□□□□ -0.15
GGPS1-201ENST00000282841 TSPYL4Q9UJ04 414 aa14.1□□□□□ -0.15
GGPS1-201ENST00000282841 NCOA3Q9Y6Q9 1424 aa14.1□□□□□ -0.15
GGPS1-201ENST00000282841 KIF1AQ12756 1690 aa14.1□□□□□ -0.15
GGPS1-201ENST00000282841 FTSJ3Q8IY81 847 aaKnown RBP14.09□□□□□ -0.15
GGPS1-201ENST00000282841 GAS2L2Q8NHY3 880 aa14.09□□□□□ -0.15
GGPS1-201ENST00000282841 ZNF530Q6P9A1 599 aaPredicted RBP14.09□□□□□ -0.15
GGPS1-201ENST00000282841 PRDM11Q9NQV5 511 aa14.09□□□□□ -0.15
GGPS1-201ENST00000282841 ERBB3P21860 1342 aa14.09□□□□□ -0.15
GGPS1-201ENST00000282841 CALD1Q05682 793 aaKnown RBP14.08□□□□□ -0.15
GGPS1-201ENST00000282841 STRN4Q9NRL3 753 aa14.08□□□□□ -0.15
GGPS1-201ENST00000282841 RTL1A6NKG5 1358 aa14.08□□□□□ -0.15
GGPS1-201ENST00000282841 CHL1O00533 1208 aa14.08□□□□□ -0.16
GGPS1-201ENST00000282841 ZKSCAN2Q63HK3 967 aa14.08□□□□□ -0.16
GGPS1-201ENST00000282841 ALS2Q96Q42 1657 aa14.08□□□□□ -0.16
GGPS1-201ENST00000282841 SLIT3O75094 1523 aa14.07□□□□□ -0.16
GGPS1-201ENST00000282841 ITPRIPQ8IWB1 547 aa14.07□□□□□ -0.16
GGPS1-201ENST00000282841 KIF24Q5T7B8 1368 aa14.07□□□□□ -0.16
GGPS1-201ENST00000282841 KCNQ3O43525 872 aa14.07□□□□□ -0.16
GGPS1-201ENST00000282841 CRB1P82279 1406 aa14.07□□□□□ -0.16
GGPS1-201ENST00000282841 IGHDP01880 384 aa14.06□□□□□ -0.16
GGPS1-201ENST00000282841 DZIP1LQ8IYY4 767 aaKnown RBP14.06□□□□□ -0.16
GGPS1-201ENST00000282841 SOS2Q07890 1332 aaPredicted RBP14.06□□□□□ -0.16
GGPS1-201ENST00000282841 TMEM57Q8N5G2 664 aa14.06□□□□□ -0.16
GGPS1-201ENST00000282841 USP54Q70EL1 1684 aa14.06□□□□□ -0.16
GGPS1-201ENST00000282841 PDE3AQ14432 1141 aa14.05□□□□□ -0.16
GGPS1-201ENST00000282841 ATF7IPQ6VMQ6 1270 aa14.05□□□□□ -0.16
GGPS1-201ENST00000282841 MAP3K5Q99683 1374 aa14.05□□□□□ -0.16
GGPS1-201ENST00000282841 MRPL50Q8N5N7 158 aaKnown RBP14.05□□□□□ -0.16
GGPS1-201ENST00000282841 PCDHB15Q9Y5E8 787 aa14.05□□□□□ -0.16
GGPS1-201ENST00000282841 PLEKHO1Q53GL0 409 aaPredicted RBP14.03□□□□□ -0.16
GGPS1-201ENST00000282841 TOM1L2Q6ZVM7 507 aa14.03□□□□□ -0.16
GGPS1-201ENST00000282841 RAPGEF4Q8WZA2 1011 aa14.03□□□□□ -0.16
GGPS1-201ENST00000282841 C1orf115Q9H7X2 142 aa14.03□□□□□ -0.16
GGPS1-201ENST00000282841 G2E3Q7L622 706 aa14.02□□□□□ -0.16
GGPS1-201ENST00000282841 MVPQ14764 893 aaKnown RBP14.02□□□□□ -0.17
GGPS1-201ENST00000282841 C1orf141Q5JVX7 400 aa14.02□□□□□ -0.17
GGPS1-201ENST00000282841 SLC4A2P04920 1241 aa14.01□□□□□ -0.17
GGPS1-201ENST00000282841 CT47B1P0C2W7 299 aaPredicted RBP14.01□□□□□ -0.17
GGPS1-201ENST00000282841 EIF2S2P20042 333 aaKnown RBP14.01□□□□□ -0.17
GGPS1-201ENST00000282841 ADAMTS2O95450 1211 aa14.01□□□□□ -0.17
GGPS1-201ENST00000282841 RGS3P49796 1198 aa14.01□□□□□ -0.17
GGPS1-201ENST00000282841 TAF7Q15545 349 aaPredicted RBP14.01□□□□□ -0.17
GGPS1-201ENST00000282841 LARP1Q6PKG0 1096 aaKnown RBP14.01□□□□□ -0.17
GGPS1-201ENST00000282841 PHRF1Q9P1Y6 1649 aaKnown RBP14□□□□□ -0.17
GGPS1-201ENST00000282841 PRAMEF22A3QJZ6 481 aa14□□□□□ -0.17
GGPS1-201ENST00000282841 NUTM2BA6NNL0 878 aaPredicted RBP14□□□□□ -0.17
GGPS1-201ENST00000282841 NUTM2EB1AL46 878 aaPredicted RBP14□□□□□ -0.17
GGPS1-201ENST00000282841 ANXA1P04083 346 aa14□□□□□ -0.17
GGPS1-201ENST00000282841 TEFQ10587 303 aa14□□□□□ -0.17
GGPS1-201ENST00000282841 SLC39A6Q13433 755 aa14□□□□□ -0.17
GGPS1-201ENST00000282841 ALDH1L2Q3SY69 923 aa14□□□□□ -0.17
GGPS1-201ENST00000282841 NUTM2AQ8IVF1 878 aaPredicted RBP14□□□□□ -0.17
GGPS1-201ENST00000282841 ZNF428Q96B54 188 aa14□□□□□ -0.17
GGPS1-201ENST00000282841 F6X3S4 739 aa14□□□□□ -0.17
GGPS1-201ENST00000282841 EVA1CP58658 441 aa14□□□□□ -0.17
GGPS1-201ENST00000282841 MEGF6O75095 1541 aa13.99□□□□□ -0.17
GGPS1-201ENST00000282841 AKAP4Q5JQC9 854 aa13.99□□□□□ -0.17
GGPS1-201ENST00000282841 KDM2BQ8NHM5 1336 aa13.98□□□□□ -0.17
GGPS1-201ENST00000282841 KIF16BQ96L93 1317 aa13.98□□□□□ -0.17
GGPS1-201ENST00000282841 BTBD11A6QL63 1104 aa13.98□□□□□ -0.17
GGPS1-201ENST00000282841 TATP17735 454 aaPredicted RBP13.98□□□□□ -0.17
GGPS1-201ENST00000282841 BTG4Q9NY30 223 aa13.98□□□□□ -0.17
GGPS1-201ENST00000282841 CAMTA1Q9Y6Y1 1673 aa13.98□□□□□ -0.17
GGPS1-201ENST00000282841 IPO8O15397 1037 aaKnown RBP13.98□□□□□ -0.17
GGPS1-201ENST00000282841 RNMTO43148 476 aaKnown RBP13.98□□□□□ -0.17
GGPS1-201ENST00000282841 RBM19Q9Y4C8 960 aaKnown RBP13.98□□□□□ -0.17
GGPS1-201ENST00000282841 SLC4A10Q6U841 1118 aa13.97□□□□□ -0.17
GGPS1-201ENST00000282841 DDX54Q8TDD1 881 aaKnown RBP13.97□□□□□ -0.17
GGPS1-201ENST00000282841 CYP27B1O15528 508 aa13.97□□□□□ -0.17
GGPS1-201ENST00000282841 NFATC2IPQ8NCF5 419 aa13.97□□□□□ -0.17
GGPS1-201ENST00000282841 AMOTQ4VCS5 1084 aa13.97□□□□□ -0.17
GGPS1-201ENST00000282841 HTATSF1O43719 755 aaKnown RBP13.96□□□□□ -0.17
GGPS1-201ENST00000282841 COL18A1P39060 1754 aa13.96□□□□□ -0.18
GGPS1-201ENST00000282841 ROBO1Q9Y6N7 1651 aa13.95□□□□□ -0.18
GGPS1-201ENST00000282841 UBAP1LF5GYI3 381 aa13.95□□□□□ -0.18
GGPS1-201ENST00000282841 PHAXQ9H814 394 aaKnown RBP13.95□□□□□ -0.18
GGPS1-201ENST00000282841 PIP4K2AP48426 406 aaPredicted RBP13.94□□□□□ -0.18
GGPS1-201ENST00000282841 CENPQQ7L2Z9 268 aaPredicted RBP13.94□□□□□ -0.18
GGPS1-201ENST00000282841 LTBP4Q8N2S1 1624 aa13.94□□□□□ -0.18
GGPS1-201ENST00000282841 CPDO75976 1380 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms