RNA–Protein interactions for RNA: ENST00000282223.11

SPOCK1-201, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1, humanhuman

TSL 5 BASIC

Gene SPOCK1, Length 4,488 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK1-201ENST00000282223 DNAJC21Q5F1R6 531 aaKnown RBP9.19□□□□□ -0.94
SPOCK1-201ENST00000282223 PDRG1Q9NUG6 133 aa9.19□□□□□ -0.94
SPOCK1-201ENST00000282223 ANO6Q4KMQ2 910 aa9.19□□□□□ -0.94
SPOCK1-201ENST00000282223 USP16Q9Y5T5 823 aa9.19□□□□□ -0.94
SPOCK1-201ENST00000282223 FAM173BQ6P4H8 233 aa9.19□□□□□ -0.94
SPOCK1-201ENST00000282223 LCMT1Q9UIC8 334 aa9.19□□□□□ -0.94
SPOCK1-201ENST00000282223 ERC2O15083 957 aa9.19□□□□□ -0.94
SPOCK1-201ENST00000282223 ECM2O94769 699 aaPredicted RBP9.19□□□□□ -0.94
SPOCK1-201ENST00000282223 HSP90B1P14625 803 aaKnown RBP9.19□□□□□ -0.94
SPOCK1-201ENST00000282223 ERO1AQ96HE7 468 aa9.19□□□□□ -0.94
SPOCK1-201ENST00000282223 DNAJC25Q9H1X3 360 aa9.19□□□□□ -0.94
SPOCK1-201ENST00000282223 DNM1Q05193 864 aaKnown RBP9.18□□□□□ -0.94
SPOCK1-201ENST00000282223 SMARCE1Q969G3 411 aa9.18□□□□□ -0.94
SPOCK1-201ENST00000282223 ARID5BQ14865 1188 aa9.18□□□□□ -0.94
SPOCK1-201ENST00000282223 RPRD2Q5VT52 1461 aaKnown RBP9.18□□□□□ -0.94
SPOCK1-201ENST00000282223 EIF4G1Q04637 1599 aaKnown RBP9.18□□□□□ -0.94
SPOCK1-201ENST00000282223 KIF2CQ99661 725 aa9.18□□□□□ -0.94
SPOCK1-201ENST00000282223 KCNF1Q9H3M0 494 aa9.18□□□□□ -0.94
SPOCK1-201ENST00000282223 ZDHHC9Q9Y397 364 aa9.18□□□□□ -0.94
SPOCK1-201ENST00000282223 CEP83Q9Y592 693 aa9.18□□□□□ -0.94
SPOCK1-201ENST00000282223 HDAC1Q13547 482 aaPredicted RBP9.17□□□□□ -0.94
SPOCK1-201ENST00000282223 OTUD7AQ8TE49 926 aaPredicted RBP9.17□□□□□ -0.94
SPOCK1-201ENST00000282223 GCC1Q96CN9 775 aa9.17□□□□□ -0.94
SPOCK1-201ENST00000282223 EPC1Q9H2F5 836 aa9.17□□□□□ -0.94
SPOCK1-201ENST00000282223 CUX1P39880 1505 aa9.17□□□□□ -0.94
SPOCK1-201ENST00000282223 IGF1RP08069 1367 aa9.17□□□□□ -0.94
SPOCK1-201ENST00000282223 CYP2C19P33261 490 aa9.17□□□□□ -0.94
SPOCK1-201ENST00000282223 GEMIN8Q9NWZ8 242 aaKnown RBP9.17□□□□□ -0.94
SPOCK1-201ENST00000282223 MAP4K4O95819 1239 aaPredicted RBP9.17□□□□□ -0.94
SPOCK1-201ENST00000282223 ATP6V1AP38606 617 aa9.17□□□□□ -0.94
SPOCK1-201ENST00000282223 PDILTQ8N807 584 aa9.17□□□□□ -0.94
SPOCK1-201ENST00000282223 FAM200AQ8TCP9 573 aa9.17□□□□□ -0.94
SPOCK1-201ENST00000282223 CACTINQ8WUQ7 758 aaKnown RBP9.17□□□□□ -0.94
SPOCK1-201ENST00000282223 CHMP7Q8WUX9 453 aaPredicted RBP9.17□□□□□ -0.94
SPOCK1-201ENST00000282223 SPTLC3Q9NUV7 552 aa9.17□□□□□ -0.94
SPOCK1-201ENST00000282223 STAG3Q9UJ98 1225 aa9.17□□□□□ -0.94
SPOCK1-201ENST00000282223 SPAG9O60271 1321 aaKnown RBP9.17□□□□□ -0.94
SPOCK1-201ENST00000282223 CCDC172P0C7W6 258 aa9.17□□□□□ -0.94
SPOCK1-201ENST00000282223 UBE2HP62256 183 aa9.17□□□□□ -0.94
SPOCK1-201ENST00000282223 RPAINQ86UA6 219 aa9.17□□□□□ -0.94
SPOCK1-201ENST00000282223 SLC24A3Q9HC58 644 aa9.17□□□□□ -0.94
SPOCK1-201ENST00000282223 PTPN23Q9H3S7 1636 aa9.17□□□□□ -0.94
SPOCK1-201ENST00000282223 DISP3Q9P2K9 1392 aa9.16□□□□□ -0.94
SPOCK1-201ENST00000282223 CALRP27797 417 aaKnown RBP9.16□□□□□ -0.94
SPOCK1-201ENST00000282223 RBM6P78332 1123 aaKnown RBP9.16□□□□□ -0.94
SPOCK1-201ENST00000282223 SMC1AQ14683 1233 aaKnown RBP9.16□□□□□ -0.94
SPOCK1-201ENST00000282223 ZSCAN25Q6NSZ9 544 aa9.16□□□□□ -0.94
SPOCK1-201ENST00000282223 TICAM2Q86XR7 235 aa9.16□□□□□ -0.94
SPOCK1-201ENST00000282223 USP26Q9BXU7 913 aa9.16□□□□□ -0.94
SPOCK1-201ENST00000282223 ARFGAP3Q9NP61 516 aa9.16□□□□□ -0.94
SPOCK1-201ENST00000282223 RNF216Q9NWF9 866 aaPredicted RBP9.16□□□□□ -0.94
SPOCK1-201ENST00000282223 CCDC69A6NI79 296 aa9.16□□□□□ -0.94
SPOCK1-201ENST00000282223 PNMA6AP0CW24 399 aaPredicted RBP9.16□□□□□ -0.94
SPOCK1-201ENST00000282223 DDIT3P35638 169 aa9.16□□□□□ -0.94
SPOCK1-201ENST00000282223 CLCN6P51797 869 aa9.16□□□□□ -0.94
SPOCK1-201ENST00000282223 CCDC83Q8IWF9 413 aa9.16□□□□□ -0.94
SPOCK1-201ENST00000282223 BIRC2Q13490 618 aa9.16□□□□□ -0.94
SPOCK1-201ENST00000282223 LRCH2Q5VUJ6 765 aa9.16□□□□□ -0.94
SPOCK1-201ENST00000282223 SAMD1Q6SPF0 538 aaPredicted RBP9.16□□□□□ -0.94
SPOCK1-201ENST00000282223 CARD6Q9BX69 1037 aa9.16□□□□□ -0.94
SPOCK1-201ENST00000282223 BCCIPQ9P287 314 aaKnown RBP eCLIP9.16□□□□□ -0.94
SPOCK1-201ENST00000282223 NEBLO76041 1014 aa9.15□□□□□ -0.94
SPOCK1-201ENST00000282223 SDSP20132 328 aa9.15□□□□□ -0.94
SPOCK1-201ENST00000282223 TYRO3Q06418 890 aa9.15□□□□□ -0.94
SPOCK1-201ENST00000282223 TMED8Q6PL24 325 aaPredicted RBP9.15□□□□□ -0.94
SPOCK1-201ENST00000282223 PRPF38AQ8NAV1 312 aaKnown RBP9.15□□□□□ -0.94
SPOCK1-201ENST00000282223 SRCIN1Q9C0H9 1055 aa9.15□□□□□ -0.94
SPOCK1-201ENST00000282223 DACT1Q9NYF0 836 aa9.15□□□□□ -0.94
SPOCK1-201ENST00000282223 RAI14Q9P0K7 980 aa9.15□□□□□ -0.94
SPOCK1-201ENST00000282223 LIG3P49916 1009 aa9.15□□□□□ -0.94
SPOCK1-201ENST00000282223 CREBRFQ8IUR6 639 aa9.15□□□□□ -0.94
SPOCK1-201ENST00000282223 PLCD4Q9BRC7 762 aa9.15□□□□□ -0.94
SPOCK1-201ENST00000282223 SDF4Q9BRK5 362 aa9.15□□□□□ -0.94
SPOCK1-201ENST00000282223 USP27XA6NNY8 438 aa9.15□□□□□ -0.94
SPOCK1-201ENST00000282223 THUMPD2Q9BTF0 503 aaKnown RBP9.15□□□□□ -0.94
SPOCK1-201ENST00000282223 CXorf56Q9H5V9 222 aa9.15□□□□□ -0.94
SPOCK1-201ENST00000282223 FRMD3A2A2Y4 597 aa9.15□□□□□ -0.95
SPOCK1-201ENST00000282223 CTIFO43310 598 aaKnown RBP9.15□□□□□ -0.95
SPOCK1-201ENST00000282223 TRHP20396 242 aaPredicted RBP9.15□□□□□ -0.95
SPOCK1-201ENST00000282223 SARNPP82979 210 aaKnown RBP9.14□□□□□ -0.95
SPOCK1-201ENST00000282223 RNF20Q5VTR2 975 aa9.14□□□□□ -0.95
SPOCK1-201ENST00000282223 C14orf37Q86TY3 774 aa9.14□□□□□ -0.95
SPOCK1-201ENST00000282223 POLKQ9UBT6 870 aa9.14□□□□□ -0.95
SPOCK1-201ENST00000282223 MCM2P49736 904 aa9.14□□□□□ -0.95
SPOCK1-201ENST00000282223 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.14□□□□□ -0.95
SPOCK1-201ENST00000282223 PLEKHH2Q8IVE3 1493 aa9.14□□□□□ -0.95
SPOCK1-201ENST00000282223 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.14□□□□□ -0.95
SPOCK1-201ENST00000282223 A0A087WWV3 80 aa9.14□□□□□ -0.95
SPOCK1-201ENST00000282223 VGFO15240 615 aaPredicted RBP9.14□□□□□ -0.95
SPOCK1-201ENST00000282223 STX6O43752 255 aa9.14□□□□□ -0.95
SPOCK1-201ENST00000282223 LIG1P18858 919 aa9.14□□□□□ -0.95
SPOCK1-201ENST00000282223 SFPQP23246 707 aaKnown RBP eCLIP9.14□□□□□ -0.95
SPOCK1-201ENST00000282223 GUCY2CP25092 1073 aa9.14□□□□□ -0.95
SPOCK1-201ENST00000282223 EVCP57679 992 aa9.14□□□□□ -0.95
SPOCK1-201ENST00000282223 PPARDQ03181 441 aa9.14□□□□□ -0.95
SPOCK1-201ENST00000282223 SLC20A2Q08357 652 aa9.14□□□□□ -0.95
SPOCK1-201ENST00000282223 STK3Q13188 491 aa9.14□□□□□ -0.95
SPOCK1-201ENST00000282223 LARP1BQ659C4 914 aaKnown RBP9.14□□□□□ -0.95
SPOCK1-201ENST00000282223 CEP57Q86XR8 500 aa9.14□□□□□ -0.95
SPOCK1-201ENST00000282223 SUFUQ9UMX1 484 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms