RNA–Protein interactions for RNA: ENST00000280527.6

CRIM1-201, Transcript of cysteine rich transmembrane BMP regulator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRIM1, Length 5,912 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRIM1-201ENST00000280527 TRMT1Q9NXH9 659 aaKnown RBP26.46■■□□□ 1.83
CRIM1-201ENST00000280527 C16orf45Q96MC5 204 aaPredicted RBP26.45■■□□□ 1.82
CRIM1-201ENST00000280527 TNNT1P13805 278 aa26.44■■□□□ 1.82
CRIM1-201ENST00000280527 SLC3A2P08195 630 aaKnown RBP26.44■■□□□ 1.82
CRIM1-201ENST00000280527 CCDC158Q5M9N0 1113 aa26.44■■□□□ 1.82
CRIM1-201ENST00000280527 SSBP05455 408 aaKnown RBP eCLIP26.43■■□□□ 1.82
CRIM1-201ENST00000280527 PPP6R1Q9UPN7 881 aa26.43■■□□□ 1.82
CRIM1-201ENST00000280527 USP25Q9UHP3 1055 aa26.42■■□□□ 1.82
CRIM1-201ENST00000280527 ZSCAN31Q96LW9 406 aaPredicted RBP26.42■■□□□ 1.82
CRIM1-201ENST00000280527 KIF2AO00139 706 aaPredicted RBP26.42■■□□□ 1.82
CRIM1-201ENST00000280527 SMG6Q86US8 1419 aaKnown RBP26.42■■□□□ 1.82
CRIM1-201ENST00000280527 ATF7IPQ6VMQ6 1270 aa26.42■■□□□ 1.82
CRIM1-201ENST00000280527 CLIP2Q9UDT6 1046 aa26.41■■□□□ 1.82
CRIM1-201ENST00000280527 KIF4BQ2VIQ3 1234 aa26.41■■□□□ 1.82
CRIM1-201ENST00000280527 JAKMIP3Q5VZ66 844 aa26.41■■□□□ 1.82
CRIM1-201ENST00000280527 SLC26A8Q96RN1 970 aa26.41■■□□□ 1.82
CRIM1-201ENST00000280527 CASTP20810 708 aaKnown RBP26.41■■□□□ 1.82
CRIM1-201ENST00000280527 NOL7Q9UMY1 257 aaKnown RBP26.41■■□□□ 1.82
CRIM1-201ENST00000280527 WWC2Q6AWC2 1192 aa26.4■■□□□ 1.82
CRIM1-201ENST00000280527 ZSCAN12O43309 604 aa26.4■■□□□ 1.82
CRIM1-201ENST00000280527 RAI14Q9P0K7 980 aa26.4■■□□□ 1.82
CRIM1-201ENST00000280527 CCDC83Q8IWF9 413 aa26.39■■□□□ 1.82
CRIM1-201ENST00000280527 IL1RAPL2Q9NP60 686 aa26.39■■□□□ 1.82
CRIM1-201ENST00000280527 CCDC183Q5T5S1 534 aa26.39■■□□□ 1.82
CRIM1-201ENST00000280527 GAS2L2Q8NHY3 880 aa26.39■■□□□ 1.82
CRIM1-201ENST00000280527 BCCIPQ9P287 314 aaKnown RBP eCLIP26.39■■□□□ 1.82
CRIM1-201ENST00000280527 SSFA2P28290 1259 aa26.39■■□□□ 1.81
CRIM1-201ENST00000280527 DDX24Q9GZR7 859 aaKnown RBP eCLIP26.39■■□□□ 1.81
CRIM1-201ENST00000280527 KIF5CO60282 957 aa26.38■■□□□ 1.81
CRIM1-201ENST00000280527 CCDC184Q52MB2 194 aa26.38■■□□□ 1.81
CRIM1-201ENST00000280527 PLEKHO1Q53GL0 409 aaPredicted RBP26.38■■□□□ 1.81
CRIM1-201ENST00000280527 AACSQ86V21 672 aa26.38■■□□□ 1.81
CRIM1-201ENST00000280527 DNA2P51530 1060 aa26.38■■□□□ 1.81
CRIM1-201ENST00000280527 PIBF1Q8WXW3 757 aa26.38■■□□□ 1.81
CRIM1-201ENST00000280527 SSR1P43307 286 aaKnown RBP26.37■■□□□ 1.81
CRIM1-201ENST00000280527 MAP9Q49MG5 647 aa26.37■■□□□ 1.81
CRIM1-201ENST00000280527 OSCARQ8IYS5 282 aa26.37■■□□□ 1.81
CRIM1-201ENST00000280527 GPRASP1Q5JY77 1395 aa26.37■■□□□ 1.81
CRIM1-201ENST00000280527 CCT4P50991 539 aaKnown RBP26.37■■□□□ 1.81
CRIM1-201ENST00000280527 UBE2Q2Q8WVN8 375 aa26.37■■□□□ 1.81
CRIM1-201ENST00000280527 DDX54Q8TDD1 881 aaKnown RBP26.35■■□□□ 1.81
CRIM1-201ENST00000280527 KLHL10Q6JEL2 608 aa26.35■■□□□ 1.81
CRIM1-201ENST00000280527 HDGFL1Q5TGJ6 251 aa26.35■■□□□ 1.81
CRIM1-201ENST00000280527 LMAN1P49257 510 aa26.34■■□□□ 1.81
CRIM1-201ENST00000280527 FKBP4Q02790 459 aaKnown RBP eCLIP26.34■■□□□ 1.815e-6■□□□□ 9.2
CRIM1-201ENST00000280527 CFAP70Q5T0N1 1121 aa26.34■■□□□ 1.81
CRIM1-201ENST00000280527 GOPCQ9HD26 462 aa26.34■■□□□ 1.81
CRIM1-201ENST00000280527 MYL6BP14649 208 aa26.34■■□□□ 1.81
CRIM1-201ENST00000280527 PNISRQ8TF01 805 aaKnown RBP26.34■■□□□ 1.81
CRIM1-201ENST00000280527 SPA17Q15506 151 aa26.33■■□□□ 1.81
CRIM1-201ENST00000280527 CKAP2LQ8IYA6 745 aa26.33■■□□□ 1.81
CRIM1-201ENST00000280527 TOP1P11387 765 aaKnown RBP26.33■■□□□ 1.81
CRIM1-201ENST00000280527 SOGA3Q5TF21 947 aa26.33■■□□□ 1.81
CRIM1-201ENST00000280527 NF2P35240 595 aa26.33■■□□□ 1.81
CRIM1-201ENST00000280527 IFFO1Q0D2I5 559 aa26.33■■□□□ 1.81
CRIM1-201ENST00000280527 ZNF397Q8NF99 534 aaPredicted RBP26.33■■□□□ 1.81
CRIM1-201ENST00000280527 TNPO1Q92973 898 aaKnown RBP26.33■■□□□ 1.81
CRIM1-201ENST00000280527 CDKL5O76039 1030 aa26.33■■□□□ 1.8
CRIM1-201ENST00000280527 NACAP1Q9BZK3 213 aa26.32■■□□□ 1.8
CRIM1-201ENST00000280527 SRCIN1Q9C0H9 1055 aa26.32■■□□□ 1.8
CRIM1-201ENST00000280527 C11orf95C9JLR9 678 aaPredicted RBP26.32■■□□□ 1.8
CRIM1-201ENST00000280527 CCDC57Q2TAC2 916 aa26.32■■□□□ 1.8
CRIM1-201ENST00000280527 NUTM1Q86Y26 1132 aa26.32■■□□□ 1.8
CRIM1-201ENST00000280527 GNL3LQ9NVN8 582 aaKnown RBP26.32■■□□□ 1.8
CRIM1-201ENST00000280527 ANO10Q9NW15 660 aa26.32■■□□□ 1.8
CRIM1-201ENST00000280527 NUTM2BA6NNL0 878 aaPredicted RBP26.31■■□□□ 1.8
CRIM1-201ENST00000280527 NUTM2EB1AL46 878 aaPredicted RBP26.31■■□□□ 1.8
CRIM1-201ENST00000280527 RBM5P52756 815 aaKnown RBP eCLIP26.31■■□□□ 1.8
CRIM1-201ENST00000280527 NUTM2AQ8IVF1 878 aaPredicted RBP26.31■■□□□ 1.8
CRIM1-201ENST00000280527 MYOM3Q5VTT5 1437 aa26.31■■□□□ 1.8
CRIM1-201ENST00000280527 CCDC178Q5BJE1 867 aa26.31■■□□□ 1.8
CRIM1-201ENST00000280527 CCDC91Q7Z6B0 441 aa26.31■■□□□ 1.8
CRIM1-201ENST00000280527 CPLX3Q8WVH0 158 aa26.31■■□□□ 1.8
CRIM1-201ENST00000280527 SMARCC1Q92922 1105 aaPredicted RBP26.31■■□□□ 1.8
CRIM1-201ENST00000280527 LUZP1Q86V48 1076 aa26.31■■□□□ 1.8
CRIM1-201ENST00000280527 MICALCLQ6ZW33 695 aa26.3■■□□□ 1.8
CRIM1-201ENST00000280527 SRGAP3O43295 1099 aa26.3■■□□□ 1.8
CRIM1-201ENST00000280527 CABP4P57796 275 aa26.3■■□□□ 1.8
CRIM1-201ENST00000280527 TXNDC2Q86VQ3 553 aa26.3■■□□□ 1.8
CRIM1-201ENST00000280527 PROSER2Q86WR7 435 aaPredicted RBP26.3■■□□□ 1.8
CRIM1-201ENST00000280527 TATP17735 454 aaPredicted RBP26.29■■□□□ 1.8
CRIM1-201ENST00000280527 IMMTQ16891 758 aaKnown RBP26.29■■□□□ 1.8
CRIM1-201ENST00000280527 UBE4AQ14139 1066 aa26.29■■□□□ 1.8
CRIM1-201ENST00000280527 PRAM1Q96QH2 718 aa26.29■■□□□ 1.8
CRIM1-201ENST00000280527 BMP2KQ9NSY1 1161 aaPredicted RBP26.29■■□□□ 1.8
CRIM1-201ENST00000280527 SULT6B1Q6IMI4 303 aa26.29■■□□□ 1.8
CRIM1-201ENST00000280527 ATAD2BQ9ULI0 1458 aa26.28■■□□□ 1.8
CRIM1-201ENST00000280527 ADCY5O95622 1261 aa26.28■■□□□ 1.8
CRIM1-201ENST00000280527 SPINK5Q9NQ38 1064 aaPredicted RBP26.28■■□□□ 1.8
CRIM1-201ENST00000280527 GDPD2Q9HCC8 539 aa26.27■■□□□ 1.8
CRIM1-201ENST00000280527 TBC1D2Q9BYX2 928 aa26.27■■□□□ 1.8
CRIM1-201ENST00000280527 TMEM57Q8N5G2 664 aa26.27■■□□□ 1.8
CRIM1-201ENST00000280527 SMARCA5O60264 1052 aaPredicted RBP26.27■■□□□ 1.8
CRIM1-201ENST00000280527 MCM3P25205 808 aa26.26■■□□□ 1.79
CRIM1-201ENST00000280527 CTR9Q6PD62 1173 aa26.26■■□□□ 1.79
CRIM1-201ENST00000280527 WDR63Q8IWG1 891 aa26.26■■□□□ 1.79
CRIM1-201ENST00000280527 RBM27Q9P2N5 1060 aaKnown RBP26.26■■□□□ 1.79
CRIM1-201ENST00000280527 TOM1L2Q6ZVM7 507 aa26.26■■□□□ 1.79
CRIM1-201ENST00000280527 DCAF8L1A6NGE4 600 aa26.26■■□□□ 1.79
CRIM1-201ENST00000280527 GUCY1B3Q02153 619 aa26.25■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms