RNA–Protein interactions for RNA: ENST00000278412.6

SSRP1-201, Transcript of structure specific recognition protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSRP1, Length 2,819 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-201ENST00000278412 PANK1Q8TE04 598 aa15.2■□□□□ 0.02
SSRP1-201ENST00000278412 CLUAP1Q96AJ1 413 aa15.2■□□□□ 0.02
SSRP1-201ENST00000278412 CAMTA1Q9Y6Y1 1673 aa15.2■□□□□ 0.02
SSRP1-201ENST00000278412 ZNF853P0CG23 659 aa15.19■□□□□ 0.02
SSRP1-201ENST00000278412 STRN4Q9NRL3 753 aa15.19■□□□□ 0.02
SSRP1-201ENST00000278412 USP35Q9P2H5 1018 aa15.19■□□□□ 0.02
SSRP1-201ENST00000278412 RLBP1P12271 317 aa15.19■□□□□ 0.02
SSRP1-201ENST00000278412 SSH1Q8WYL5 1049 aa15.19■□□□□ 0.02
SSRP1-201ENST00000278412 ABCA3Q99758 1704 aa15.19■□□□□ 0.02
SSRP1-201ENST00000278412 MPRIPQ6WCQ1 1025 aa15.18■□□□□ 0.02
SSRP1-201ENST00000278412 PRKCSHP14314 528 aaPredicted RBP15.17■□□□□ 0.02
SSRP1-201ENST00000278412 SKAP1Q86WV1 359 aa15.17■□□□□ 0.02
SSRP1-201ENST00000278412 CRB1P82279 1406 aa15.17■□□□□ 0.02
SSRP1-201ENST00000278412 MEGF6O75095 1541 aa15.17■□□□□ 0.02
SSRP1-201ENST00000278412 UBAP1LF5GYI3 381 aa15.16■□□□□ 0.02
SSRP1-201ENST00000278412 CFAP44Q96MT7 982 aa15.16■□□□□ 0.02
SSRP1-201ENST00000278412 ADAMTS2O95450 1211 aa15.16■□□□□ 0.02
SSRP1-201ENST00000278412 ZNF530Q6P9A1 599 aaPredicted RBP15.16■□□□□ 0.02
SSRP1-201ENST00000278412 LARP1Q6PKG0 1096 aaKnown RBP15.16■□□□□ 0.02
SSRP1-201ENST00000278412 IL16Q14005 1332 aa15.16■□□□□ 0.02
SSRP1-201ENST00000278412 IFT57Q9NWB7 429 aa15.16■□□□□ 0.02
SSRP1-201ENST00000278412 NUTM2BA6NNL0 878 aaPredicted RBP15.15■□□□□ 0.02
SSRP1-201ENST00000278412 GNAT3A8MTJ3 354 aa15.15■□□□□ 0.02
SSRP1-201ENST00000278412 NUTM2EB1AL46 878 aaPredicted RBP15.15■□□□□ 0.02
SSRP1-201ENST00000278412 NUTM2AQ8IVF1 878 aaPredicted RBP15.15■□□□□ 0.02
SSRP1-201ENST00000278412 KCNQ3O43525 872 aa15.15■□□□□ 0.02
SSRP1-201ENST00000278412 NCBP3Q53F19 620 aaKnown RBP15.15■□□□□ 0.02
SSRP1-201ENST00000278412 SMC4Q9NTJ3 1288 aa15.15■□□□□ 0.02
SSRP1-201ENST00000278412 GAS2L2Q8NHY3 880 aa15.14■□□□□ 0.01
SSRP1-201ENST00000278412 RTF1Q92541 710 aaKnown RBP15.14■□□□□ 0.01
SSRP1-201ENST00000278412 PPP4R2Q9NY27 417 aa15.14■□□□□ 0.01
SSRP1-201ENST00000278412 COG6Q9Y2V7 657 aa15.14■□□□□ 0.01
SSRP1-201ENST00000278412 VAMP4O75379 141 aa15.14■□□□□ 0.01
SSRP1-201ENST00000278412 GNAI1P63096 354 aa15.14■□□□□ 0.01
SSRP1-201ENST00000278412 CPDO75976 1380 aa15.14■□□□□ 0.01
SSRP1-201ENST00000278412 MAP3K5Q99683 1374 aa15.14■□□□□ 0.01
SSRP1-201ENST00000278412 FAM208AQ9UK61 1670 aaKnown RBP15.14■□□□□ 0.01
SSRP1-201ENST00000278412 CHL1O00533 1208 aa15.13■□□□□ 0.01
SSRP1-201ENST00000278412 NECTIN2Q92692 538 aa15.13■□□□□ 0.01
SSRP1-201ENST00000278412 CANXP27824 592 aaKnown RBP15.13■□□□□ 0.01
SSRP1-201ENST00000278412 LMOD3Q0VAK6 560 aa15.13■□□□□ 0.01
SSRP1-201ENST00000278412 TOM1L2Q6ZVM7 507 aa15.13■□□□□ 0.01
SSRP1-201ENST00000278412 BTG4Q9NY30 223 aa15.12■□□□□ 0.01
SSRP1-201ENST00000278412 NCAPD2Q15021 1401 aa15.12■□□□□ 0.01
SSRP1-201ENST00000278412 LMO7Q8WWI1 1683 aa15.12■□□□□ 0.01
SSRP1-201ENST00000278412 TWISTNBQ3B726 338 aaPredicted RBP15.12■□□□□ 0.01
SSRP1-201ENST00000278412 TSPYL4Q9UJ04 414 aa15.12■□□□□ 0.01
SSRP1-201ENST00000278412 NOB1Q9ULX3 412 aaKnown RBP15.12■□□□□ 0.01
SSRP1-201ENST00000278412 COL5A2P05997 1499 aaPredicted RBP15.11■□□□□ 0.01
SSRP1-201ENST00000278412 PHLPP1O60346 1717 aa15.11■□□□□ 0.01
SSRP1-201ENST00000278412 COL16A1Q07092 1604 aaPredicted RBP15.1■□□□□ 0.01
SSRP1-201ENST00000278412 RAPGEF4Q8WZA2 1011 aa15.1■□□□□ 0.01
SSRP1-201ENST00000278412 CCDC136Q96JN2 1154 aa15.1■□□□□ 0.01
SSRP1-201ENST00000278412 AHDC1Q5TGY3 1603 aaPredicted RBP15.1■□□□□ 0.01
SSRP1-201ENST00000278412 CYP27B1O15528 508 aa15.09■□□□□ 0.01
SSRP1-201ENST00000278412 TOM1O60784 492 aa15.09■□□□□ 0.01
SSRP1-201ENST00000278412 TRIM27P14373 513 aa15.09■□□□□ 0.01
SSRP1-201ENST00000278412 WDR17Q8IZU2 1322 aa15.09■□□□□ 0.01
SSRP1-201ENST00000278412 PLEKHO1Q53GL0 409 aaPredicted RBP15.08■□□□□ 0.01
SSRP1-201ENST00000278412 VIRMAQ69YN4 1812 aaKnown RBP15.08■□□□□ 0
SSRP1-201ENST00000278412 PRAMEF22A3QJZ6 481 aa15.07■□□□□ 0
SSRP1-201ENST00000278412 EVA1CP58658 441 aa15.07■□□□□ 0
SSRP1-201ENST00000278412 CALD1Q05682 793 aaKnown RBP15.07■□□□□ 0
SSRP1-201ENST00000278412 LRRC37A3O60309 1634 aa15.07■□□□□ 0
SSRP1-201ENST00000278412 EP400Q96L91 3159 aa15.07■□□□□ 0
SSRP1-201ENST00000278412 SLC39A6Q13433 755 aa15.07■□□□□ 0
SSRP1-201ENST00000278412 CEMIPQ8WUJ3 1361 aa15.06■□□□□ 0
SSRP1-201ENST00000278412 RNMTO43148 476 aaKnown RBP15.06■□□□□ 0
SSRP1-201ENST00000278412 AKAP4Q5JQC9 854 aa15.06■□□□□ 0
SSRP1-201ENST00000278412 KDM6AO15550 1401 aaPredicted RBP15.06■□□□□ 0
SSRP1-201ENST00000278412 TATP17735 454 aaPredicted RBP15.06■□□□□ 0
SSRP1-201ENST00000278412 C1orf141Q5JVX7 400 aa15.06■□□□□ 0
SSRP1-201ENST00000278412 MRPL50Q8N5N7 158 aaKnown RBP15.06■□□□□ 0
SSRP1-201ENST00000278412 G2E3Q7L622 706 aa15.05■□□□□ 0
SSRP1-201ENST00000278412 PHKG2P15735 406 aa15.04■□□□□ -0
SSRP1-201ENST00000278412 TAF7Q15545 349 aaPredicted RBP15.04■□□□□ -0
SSRP1-201ENST00000278412 DDX54Q8TDD1 881 aaKnown RBP15.04■□□□□ -0
SSRP1-201ENST00000278412 KAT6BQ8WYB5 2073 aa15.04■□□□□ -0
SSRP1-201ENST00000278412 ANXA1P04083 346 aa15.04■□□□□ -0
SSRP1-201ENST00000278412 CERKQ8TCT0 537 aa15.04■□□□□ -0
SSRP1-201ENST00000278412 TMEM57Q8N5G2 664 aa15.03■□□□□ -0
SSRP1-201ENST00000278412 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.03■□□□□ -0
SSRP1-201ENST00000278412 AMOTQ4VCS5 1084 aa15.03■□□□□ -0
SSRP1-201ENST00000278412 ZKSCAN2Q63HK3 967 aa15.03■□□□□ -0
SSRP1-201ENST00000278412 NFATC2IPQ8NCF5 419 aa15.03■□□□□ -0
SSRP1-201ENST00000278412 ERICH6BQ5W0A0 696 aa15.02■□□□□ -0
SSRP1-201ENST00000278412 TEFQ10587 303 aa15.02■□□□□ -0
SSRP1-201ENST00000278412 ATF7IPQ6VMQ6 1270 aa15.02■□□□□ -0
SSRP1-201ENST00000278412 BTBD11A6QL63 1104 aa15.02□□□□□ -0.01
SSRP1-201ENST00000278412 HTATSF1O43719 755 aaKnown RBP15.02□□□□□ -0.01
SSRP1-201ENST00000278412 EIF2S2P20042 333 aaKnown RBP15.01□□□□□ -0.01
SSRP1-201ENST00000278412 DZIP1LQ8IYY4 767 aaKnown RBP15.01□□□□□ -0.01
SSRP1-201ENST00000278412 FTSJ3Q8IY81 847 aaKnown RBP15.01□□□□□ -0.01
SSRP1-201ENST00000278412 F6X3S4 739 aa15□□□□□ -0.01
SSRP1-201ENST00000278412 SLC4A2P04920 1241 aa15□□□□□ -0.01
SSRP1-201ENST00000278412 PDE3AQ14432 1141 aa15□□□□□ -0.01
SSRP1-201ENST00000278412 ITPRIPQ8IWB1 547 aa15□□□□□ -0.01
SSRP1-201ENST00000278412 ZNF428Q96B54 188 aa15□□□□□ -0.01
SSRP1-201ENST00000278412 CARD10Q9BWT7 1032 aa15□□□□□ -0.01
SSRP1-201ENST00000278412 PCDHB15Q9Y5E8 787 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms