RNA–Protein interactions for RNA: ENST00000277480.6

LCN2-201, Transcript of lipocalin 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene LCN2, Length 822 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN2-201ENST00000277480 OVOS2A0A0G2JMS6 1433 aa13.3□□□□□ -0.28
LCN2-201ENST00000277480 TATP17735 454 aaPredicted RBP13.29□□□□□ -0.28
LCN2-201ENST00000277480 PLEKHO1Q53GL0 409 aaPredicted RBP13.29□□□□□ -0.28
LCN2-201ENST00000277480 FNBP4Q8N3X1 1017 aaPredicted RBP13.29□□□□□ -0.28
LCN2-201ENST00000277480 RAPGEF4Q8WZA2 1011 aa13.29□□□□□ -0.28
LCN2-201ENST00000277480 DISP2A7MBM2 1401 aa13.29□□□□□ -0.28
LCN2-201ENST00000277480 NWD2Q9ULI1 1742 aa13.28□□□□□ -0.28
LCN2-201ENST00000277480 AMOTQ4VCS5 1084 aa13.28□□□□□ -0.28
LCN2-201ENST00000277480 DUSP27Q5VZP5 1158 aa13.28□□□□□ -0.28
LCN2-201ENST00000277480 MCM10Q7L590 875 aa13.28□□□□□ -0.28
LCN2-201ENST00000277480 UNC5CLQ8IV45 518 aa13.28□□□□□ -0.28
LCN2-201ENST00000277480 FBXO41Q8TF61 875 aa13.28□□□□□ -0.28
LCN2-201ENST00000277480 NGLY1Q96IV0 654 aa13.28□□□□□ -0.28
LCN2-201ENST00000277480 USP35Q9P2H5 1018 aa13.28□□□□□ -0.28
LCN2-201ENST00000277480 ZNF530Q6P9A1 599 aaPredicted RBP13.27□□□□□ -0.29
LCN2-201ENST00000277480 SPATA31A1Q5TZJ5 1347 aa13.27□□□□□ -0.29
LCN2-201ENST00000277480 MAP3K5Q99683 1374 aa13.27□□□□□ -0.29
LCN2-201ENST00000277480 PLEKHG2Q9H7P9 1386 aa13.27□□□□□ -0.29
LCN2-201ENST00000277480 DLG5Q8TDM6 1919 aa13.27□□□□□ -0.29
LCN2-201ENST00000277480 GNAT3A8MTJ3 354 aa13.26□□□□□ -0.29
LCN2-201ENST00000277480 E9PSI1 815 aa13.26□□□□□ -0.29
LCN2-201ENST00000277480 IL2RBP14784 551 aa13.26□□□□□ -0.29
LCN2-201ENST00000277480 LMOD3Q0VAK6 560 aa13.26□□□□□ -0.29
LCN2-201ENST00000277480 IL16Q14005 1332 aa13.26□□□□□ -0.29
LCN2-201ENST00000277480 SPATA31A5Q5VU36 1347 aa13.26□□□□□ -0.29
LCN2-201ENST00000277480 SPATA31A7Q8IWB4 1347 aa13.26□□□□□ -0.29
LCN2-201ENST00000277480 IL17REQ8NFR9 667 aa13.26□□□□□ -0.29
LCN2-201ENST00000277480 PKD1L3Q7Z443 1732 aa13.25□□□□□ -0.29
LCN2-201ENST00000277480 CYP27B1O15528 508 aa13.25□□□□□ -0.29
LCN2-201ENST00000277480 HTATSF1O43719 755 aaKnown RBP13.25□□□□□ -0.29
LCN2-201ENST00000277480 AKAP4Q5JQC9 854 aa13.25□□□□□ -0.29
LCN2-201ENST00000277480 MEX3CQ5U5Q3 659 aaKnown RBP13.25□□□□□ -0.29
LCN2-201ENST00000277480 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.25□□□□□ -0.29
LCN2-201ENST00000277480 AFF2P51816 1311 aa13.24□□□□□ -0.29
LCN2-201ENST00000277480 ZNF853P0CG23 659 aa13.24□□□□□ -0.29
LCN2-201ENST00000277480 PHKG2P15735 406 aa13.24□□□□□ -0.29
LCN2-201ENST00000277480 VPS72Q15906 364 aa13.24□□□□□ -0.29
LCN2-201ENST00000277480 LGR6Q9HBX8 967 aa13.24□□□□□ -0.29
LCN2-201ENST00000277480 USP21Q9UK80 565 aa13.24□□□□□ -0.29
LCN2-201ENST00000277480 SPG7Q9UQ90 795 aa13.24□□□□□ -0.29
LCN2-201ENST00000277480 PARP4Q9UKK3 1724 aaKnown RBP13.24□□□□□ -0.29
LCN2-201ENST00000277480 LRRC37A3O60309 1634 aa13.24□□□□□ -0.29
LCN2-201ENST00000277480 CEMIPQ8WUJ3 1361 aa13.23□□□□□ -0.29
LCN2-201ENST00000277480 FANCIQ9NVI1 1328 aa13.23□□□□□ -0.29
LCN2-201ENST00000277480 MPRIPQ6WCQ1 1025 aa13.23□□□□□ -0.29
LCN2-201ENST00000277480 ZCRB1Q8TBF4 217 aaKnown RBP13.23□□□□□ -0.29
LCN2-201ENST00000277480 TSR2Q969E8 191 aaKnown RBP13.23□□□□□ -0.29
LCN2-201ENST00000277480 KDM6AO15550 1401 aaPredicted RBP13.22□□□□□ -0.29
LCN2-201ENST00000277480 SHANK3Q9BYB0 1731 aa13.22□□□□□ -0.29
LCN2-201ENST00000277480 RNMTO43148 476 aaKnown RBP13.22□□□□□ -0.29
LCN2-201ENST00000277480 RTF1Q92541 710 aaKnown RBP13.22□□□□□ -0.29
LCN2-201ENST00000277480 IFT57Q9NWB7 429 aa13.22□□□□□ -0.29
LCN2-201ENST00000277480 THRAP3Q9Y2W1 955 aaKnown RBP13.22□□□□□ -0.29
LCN2-201ENST00000277480 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.22□□□□□ -0.29
LCN2-201ENST00000277480 ADAMTS7Q9UKP4 1686 aa13.21□□□□□ -0.29
LCN2-201ENST00000277480 WNK3Q9BYP7 1800 aa13.21□□□□□ -0.29
LCN2-201ENST00000277480 C1orf141Q5JVX7 400 aa13.21□□□□□ -0.29
LCN2-201ENST00000277480 IFNL2Q8IZJ0 200 aa13.21□□□□□ -0.29
LCN2-201ENST00000277480 CCDC9Q9Y3X0 531 aaKnown RBP13.21□□□□□ -0.29
LCN2-201ENST00000277480 LAS1LQ9Y4W2 734 aaKnown RBP13.21□□□□□ -0.29
LCN2-201ENST00000277480 ATRNO75882 1429 aa13.21□□□□□ -0.3
LCN2-201ENST00000277480 GNAI1P63096 354 aa13.2□□□□□ -0.3
LCN2-201ENST00000277480 CALD1Q05682 793 aaKnown RBP13.2□□□□□ -0.3
LCN2-201ENST00000277480 BARGINQ6ZT62 677 aa13.2□□□□□ -0.3
LCN2-201ENST00000277480 CFAP44Q96MT7 982 aa13.2□□□□□ -0.3
LCN2-201ENST00000277480 MYH16Q9H6N6 1097 aa13.2□□□□□ -0.3
LCN2-201ENST00000277480 MBIPQ9NS73 344 aa13.2□□□□□ -0.3
LCN2-201ENST00000277480 MIS18AQ9NYP9 233 aa13.2□□□□□ -0.3
LCN2-201ENST00000277480 PCDH11XQ9BZA7 1347 aa13.19□□□□□ -0.3
LCN2-201ENST00000277480 PCDH11YQ9BZA8 1340 aa13.19□□□□□ -0.3
LCN2-201ENST00000277480 CHL1O00533 1208 aa13.19□□□□□ -0.3
LCN2-201ENST00000277480 EXOSC9Q06265 439 aaKnown RBP13.19□□□□□ -0.3
LCN2-201ENST00000277480 TNS2Q63HR2 1409 aa13.19□□□□□ -0.3
LCN2-201ENST00000277480 GLI3P10071 1580 aa13.19□□□□□ -0.3
LCN2-201ENST00000277480 NKX1-1Q15270 411 aaPredicted RBP13.18□□□□□ -0.3
LCN2-201ENST00000277480 FAM98CQ17RN3 349 aaKnown RBP13.18□□□□□ -0.3
LCN2-201ENST00000277480 DDX54Q8TDD1 881 aaKnown RBP13.18□□□□□ -0.3
LCN2-201ENST00000277480 CDCA7Q9BWT1 371 aaPredicted RBP13.17□□□□□ -0.3
LCN2-201ENST00000277480 MRC1P22897 1456 aa13.16□□□□□ -0.3
LCN2-201ENST00000277480 EXOC5O00471 708 aa13.16□□□□□ -0.3
LCN2-201ENST00000277480 TAF7Q15545 349 aaPredicted RBP13.16□□□□□ -0.3
LCN2-201ENST00000277480 KRT24Q2M2I5 525 aa13.16□□□□□ -0.3
LCN2-201ENST00000277480 DCAF5Q96JK2 942 aa13.16□□□□□ -0.3
LCN2-201ENST00000277480 GJD4Q96KN9 370 aaPredicted RBP13.16□□□□□ -0.3
LCN2-201ENST00000277480 TRPC5Q9UL62 973 aaPredicted RBP13.16□□□□□ -0.3
LCN2-201ENST00000277480 KCNQ3O43525 872 aa13.15□□□□□ -0.3
LCN2-201ENST00000277480 HSP90AB1P08238 724 aaKnown RBP13.15□□□□□ -0.3
LCN2-201ENST00000277480 ILDR1Q86SU0 546 aaPredicted RBP13.15□□□□□ -0.3
LCN2-201ENST00000277480 TSPYL6Q8N831 410 aa13.15□□□□□ -0.3
LCN2-201ENST00000277480 C8orf58Q8NAV2 365 aa13.15□□□□□ -0.3
LCN2-201ENST00000277480 SLC52A2Q9HAB3 445 aa13.15□□□□□ -0.3
LCN2-201ENST00000277480 TSPYL4Q9UJ04 414 aa13.15□□□□□ -0.3
LCN2-201ENST00000277480 RCAN3Q9UKA8 241 aa13.15□□□□□ -0.3
LCN2-201ENST00000277480 SUPT16HQ9Y5B9 1047 aaKnown RBP13.15□□□□□ -0.3
LCN2-201ENST00000277480 THSD7AQ9UPZ6 1657 aa13.15□□□□□ -0.31
LCN2-201ENST00000277480 TOGARAM1Q9Y4F4 1720 aa13.14□□□□□ -0.31
LCN2-201ENST00000277480 TEFQ10587 303 aa13.14□□□□□ -0.31
LCN2-201ENST00000277480 DDB1Q16531 1140 aa13.14□□□□□ -0.31
LCN2-201ENST00000277480 MARCH10Q8NA82 808 aaPredicted RBP13.14□□□□□ -0.31
LCN2-201ENST00000277480 QTRT2Q9H974 415 aaKnown RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms