RNA–Protein interactions for RNA: ENST00000276241.10

CT55-201, Transcript of cancer/testis antigen 55, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CT55, Length 1,445 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CT55-201ENST00000276241 PARD3Q8TEW0 1356 aa18.56■□□□□ 0.56
CT55-201ENST00000276241 TATP17735 454 aaPredicted RBP18.56■□□□□ 0.56
CT55-201ENST00000276241 DOT1LQ8TEK3 1739 aa18.56■□□□□ 0.56
CT55-201ENST00000276241 BCL11BQ9C0K0 894 aaPredicted RBP18.56■□□□□ 0.56
CT55-201ENST00000276241 RGPD3A6NKT7 1758 aaPredicted RBP18.55■□□□□ 0.56
CT55-201ENST00000276241 RGPD4Q7Z3J3 1758 aa18.55■□□□□ 0.56
CT55-201ENST00000276241 PER1O15534 1290 aaPredicted RBP18.55■□□□□ 0.56
CT55-201ENST00000276241 EIF4A2Q14240 407 aaKnown RBP18.55■□□□□ 0.56
CT55-201ENST00000276241 ZCRB1Q8TBF4 217 aaKnown RBP18.55■□□□□ 0.56
CT55-201ENST00000276241 NCAPD2Q15021 1401 aa18.54■□□□□ 0.56
CT55-201ENST00000276241 KCNQ2O43526 872 aa18.54■□□□□ 0.56
CT55-201ENST00000276241 EYA1Q99502 592 aa18.53■□□□□ 0.56
CT55-201ENST00000276241 PKD1L3Q7Z443 1732 aa18.52■□□□□ 0.56
CT55-201ENST00000276241 PSDA5PKW4 1024 aaPredicted RBP18.52■□□□□ 0.56
CT55-201ENST00000276241 BTAF1O14981 1849 aa18.5■□□□□ 0.55
CT55-201ENST00000276241 PCDH11XQ9BZA7 1347 aa18.5■□□□□ 0.55
CT55-201ENST00000276241 PCDH11YQ9BZA8 1340 aa18.5■□□□□ 0.55
CT55-201ENST00000276241 SYTL4Q96C24 671 aaPredicted RBP18.49■□□□□ 0.55
CT55-201ENST00000276241 PLSCR1O15162 318 aa18.49■□□□□ 0.55
CT55-201ENST00000276241 R3HDM1Q15032 1099 aaKnown RBP18.49■□□□□ 0.55
CT55-201ENST00000276241 IGSF1Q8N6C5 1336 aa18.49■□□□□ 0.55
CT55-201ENST00000276241 NPC1L1Q9UHC9 1359 aa18.48■□□□□ 0.55
CT55-201ENST00000276241 MTHFSP49914 203 aa18.46■□□□□ 0.55
CT55-201ENST00000276241 TOGARAM1Q9Y4F4 1720 aa18.45■□□□□ 0.54
CT55-201ENST00000276241 SPG7Q9UQ90 795 aa18.45■□□□□ 0.54
CT55-201ENST00000276241 CYP27B1O15528 508 aa18.44■□□□□ 0.54
CT55-201ENST00000276241 PRIM1P49642 420 aaKnown RBP18.44■□□□□ 0.54
CT55-201ENST00000276241 NBPF14Q5TI25 921 aa18.44■□□□□ 0.54
CT55-201ENST00000276241 TXNRD1Q16881 649 aa18.43■□□□□ 0.54
CT55-201ENST00000276241 AEBP1Q8IUX7 1158 aa18.42■□□□□ 0.54
CT55-201ENST00000276241 IL13P35225 146 aa18.41■□□□□ 0.54
CT55-201ENST00000276241 PROM2Q8N271 834 aa18.41■□□□□ 0.54
CT55-201ENST00000276241 ANO8Q9HCE9 1232 aaPredicted RBP18.41■□□□□ 0.54
CT55-201ENST00000276241 SULT6B1Q6IMI4 303 aa18.4■□□□□ 0.54
CT55-201ENST00000276241 COL3A1P02461 1466 aaPredicted RBP18.4■□□□□ 0.54
CT55-201ENST00000276241 PAPPAQ13219 1627 aa18.39■□□□□ 0.53
CT55-201ENST00000276241 LRP5O75197 1615 aa18.38■□□□□ 0.53
CT55-201ENST00000276241 DIAPH1O60610 1272 aaKnown RBP18.38■□□□□ 0.53
CT55-201ENST00000276241 PHKG2P15735 406 aa18.38■□□□□ 0.53
CT55-201ENST00000276241 IFNL2Q8IZJ0 200 aa18.38■□□□□ 0.53
CT55-201ENST00000276241 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.38■□□□□ 0.53
CT55-201ENST00000276241 PLEKHG2Q9H7P9 1386 aa18.38■□□□□ 0.53
CT55-201ENST00000276241 MPRIPQ6WCQ1 1025 aa18.37■□□□□ 0.53
CT55-201ENST00000276241 KDRP35968 1356 aa18.37■□□□□ 0.53
CT55-201ENST00000276241 LY75O60449 1722 aa18.37■□□□□ 0.53
CT55-201ENST00000276241 HMOX1P09601 288 aa18.36■□□□□ 0.53
CT55-201ENST00000276241 PLEKHO1Q53GL0 409 aaPredicted RBP18.36■□□□□ 0.53
CT55-201ENST00000276241 ZNF530Q6P9A1 599 aaPredicted RBP18.36■□□□□ 0.53
CT55-201ENST00000276241 STK32BQ9NY57 414 aa18.36■□□□□ 0.53
CT55-201ENST00000276241 ITGB4P16144 1822 aa18.36■□□□□ 0.53
CT55-201ENST00000276241 KAT6BQ8WYB5 2073 aa18.36■□□□□ 0.53
CT55-201ENST00000276241 U2SURPO15042 1029 aaKnown RBP18.34■□□□□ 0.53
CT55-201ENST00000276241 ZEB1P37275 1124 aaPredicted RBP18.34■□□□□ 0.53
CT55-201ENST00000276241 KCNQ4P56696 695 aa18.34■□□□□ 0.53
CT55-201ENST00000276241 NKX1-1Q15270 411 aaPredicted RBP18.34■□□□□ 0.53
CT55-201ENST00000276241 LRRC4BQ9NT99 713 aa18.34■□□□□ 0.53
CT55-201ENST00000276241 PPP2R1AP30153 589 aa18.33■□□□□ 0.53
CT55-201ENST00000276241 AMOTQ4VCS5 1084 aa18.33■□□□□ 0.53
CT55-201ENST00000276241 CFAP53Q96M91 514 aa18.33■□□□□ 0.53
CT55-201ENST00000276241 CASZ1Q86V15 1759 aa18.33■□□□□ 0.52
CT55-201ENST00000276241 PALLDQ8WX93 1383 aa18.33■□□□□ 0.52
CT55-201ENST00000276241 CCNL1Q9UK58 526 aaPredicted RBP18.32■□□□□ 0.52
CT55-201ENST00000276241 KDM6AO15550 1401 aaPredicted RBP18.32■□□□□ 0.52
CT55-201ENST00000276241 DDX10Q13206 875 aaKnown RBP18.32■□□□□ 0.52
CT55-201ENST00000276241 SLC15A2Q16348 729 aa18.32■□□□□ 0.52
CT55-201ENST00000276241 ZNF827Q17R98 1081 aa18.32■□□□□ 0.52
CT55-201ENST00000276241 C1orf141Q5JVX7 400 aa18.32■□□□□ 0.52
CT55-201ENST00000276241 SLC27A3Q5K4L6 730 aa18.32■□□□□ 0.52
CT55-201ENST00000276241 TMOD3Q9NYL9 352 aa18.32■□□□□ 0.52
CT55-201ENST00000276241 PIGBQ92521 554 aa18.31■□□□□ 0.52
CT55-201ENST00000276241 HSP90AB1P08238 724 aaKnown RBP18.3■□□□□ 0.52
CT55-201ENST00000276241 C5P01031 1676 aa18.29■□□□□ 0.52
CT55-201ENST00000276241 DCAF5Q96JK2 942 aa18.29■□□□□ 0.52
CT55-201ENST00000276241 PDGFDQ9GZP0 370 aaPredicted RBP18.29■□□□□ 0.52
CT55-201ENST00000276241 SMARCC1Q92922 1105 aaPredicted RBP18.27■□□□□ 0.52
CT55-201ENST00000276241 TUBGCP6Q96RT7 1819 aa18.27■□□□□ 0.51
CT55-201ENST00000276241 ZBTB7AO95365 584 aa18.25■□□□□ 0.51
CT55-201ENST00000276241 AKAP4Q5JQC9 854 aa18.25■□□□□ 0.51
CT55-201ENST00000276241 AKT1S1Q96B36 256 aa18.25■□□□□ 0.51
CT55-201ENST00000276241 ERVV-2B6SEH9 535 aa18.24■□□□□ 0.51
CT55-201ENST00000276241 CABP4P57796 275 aa18.24■□□□□ 0.51
CT55-201ENST00000276241 MTHFSDQ2M296 383 aaKnown RBP18.24■□□□□ 0.51
CT55-201ENST00000276241 TFCP2L1Q9NZI6 479 aa18.24■□□□□ 0.51
CT55-201ENST00000276241 ASAP1Q9ULH1 1129 aa18.24■□□□□ 0.51
CT55-201ENST00000276241 NUDCQ9Y266 331 aa18.24■□□□□ 0.51
CT55-201ENST00000276241 SPON1Q9HCB6 807 aa18.23■□□□□ 0.51
CT55-201ENST00000276241 SCN11AQ9UI33 1791 aa18.23■□□□□ 0.51
CT55-201ENST00000276241 QSER1Q2KHR3 1735 aa18.23■□□□□ 0.51
CT55-201ENST00000276241 TAF1LQ8IZX4 1826 aa18.23■□□□□ 0.51
CT55-201ENST00000276241 C4BP0C0L5 1744 aa18.23■□□□□ 0.51
CT55-201ENST00000276241 U2AF1L5P0DN76 240 aaPredicted RBP18.23■□□□□ 0.51
CT55-201ENST00000276241 U2AF1Q01081 240 aaKnown RBP eCLIP18.23■□□□□ 0.51
CT55-201ENST00000276241 PRKAR2BP31323 418 aa18.22■□□□□ 0.51
CT55-201ENST00000276241 ATG3Q9NT62 314 aa18.22■□□□□ 0.51
CT55-201ENST00000276241 PNPLA7Q6ZV29 1317 aa18.21■□□□□ 0.51
CT55-201ENST00000276241 LOC102724428A0A0B4J2F2 783 aa18.21■□□□□ 0.51
CT55-201ENST00000276241 SIK1P57059 783 aa18.21■□□□□ 0.51
CT55-201ENST00000276241 RSPH6AQ9H0K4 717 aa18.21■□□□□ 0.51
CT55-201ENST00000276241 PPP1R1BQ9UD71 204 aaPredicted RBP18.21■□□□□ 0.51
CT55-201ENST00000276241 ATF5Q9Y2D1 282 aaPredicted RBP18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms