RNA–Protein interactions for RNA: ENST00000273062.6

CTDSP1-201, Transcript of CTD small phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSP1, Length 2,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-201ENST00000273062 FYB1O15117 783 aa19.26■□□□□ 0.67
CTDSP1-201ENST00000273062 TCP11L2Q8N4U5 519 aa19.26■□□□□ 0.67
CTDSP1-201ENST00000273062 ZBTB9Q96C00 473 aa19.26■□□□□ 0.67
CTDSP1-201ENST00000273062 ATAD2Q6PL18 1390 aa19.26■□□□□ 0.67
CTDSP1-201ENST00000273062 SETD1AO15047 1707 aaKnown RBP19.26■□□□□ 0.67
CTDSP1-201ENST00000273062 TTC12Q9H892 705 aaPredicted RBP19.25■□□□□ 0.67
CTDSP1-201ENST00000273062 LRSAM1Q6UWE0 723 aa19.25■□□□□ 0.67
CTDSP1-201ENST00000273062 PIBF1Q8WXW3 757 aa19.25■□□□□ 0.67
CTDSP1-201ENST00000273062 SECISBP2LQ93073 1101 aaKnown RBP19.25■□□□□ 0.67
CTDSP1-201ENST00000273062 NRXN3Q9Y4C0 1643 aa19.25■□□□□ 0.67
CTDSP1-201ENST00000273062 NSD2O96028 1365 aa19.25■□□□□ 0.67
CTDSP1-201ENST00000273062 FBLN1P23142 703 aa19.24■□□□□ 0.67
CTDSP1-201ENST00000273062 AEBP1Q8IUX7 1158 aa19.24■□□□□ 0.67
CTDSP1-201ENST00000273062 RUNDC1Q96C34 613 aa19.24■□□□□ 0.67
CTDSP1-201ENST00000273062 U2AF1L5P0DN76 240 aaPredicted RBP19.24■□□□□ 0.67
CTDSP1-201ENST00000273062 CAPN2P17655 700 aa19.24■□□□□ 0.67
CTDSP1-201ENST00000273062 U2AF1Q01081 240 aaKnown RBP eCLIP19.24■□□□□ 0.67
CTDSP1-201ENST00000273062 TXNDC2Q86VQ3 553 aa19.24■□□□□ 0.67
CTDSP1-201ENST00000273062 CFAP53Q96M91 514 aa19.24■□□□□ 0.67
CTDSP1-201ENST00000273062 TERF2IPQ9NYB0 399 aa19.24■□□□□ 0.67
CTDSP1-201ENST00000273062 IQSEC2Q5JU85 1478 aa19.24■□□□□ 0.67
CTDSP1-201ENST00000273062 SLFN14P0C7P3 912 aa19.23■□□□□ 0.67
CTDSP1-201ENST00000273062 PLPPR3Q6T4P5 718 aa19.23■□□□□ 0.67
CTDSP1-201ENST00000273062 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.23■□□□□ 0.67
CTDSP1-201ENST00000273062 ANKRD7Q92527 254 aa19.22■□□□□ 0.67
CTDSP1-201ENST00000273062 NCKAP5LQ9HCH0 1330 aa19.22■□□□□ 0.67
CTDSP1-201ENST00000273062 CEBPAP49715 358 aaPredicted RBP19.21■□□□□ 0.67
CTDSP1-201ENST00000273062 IRX3P78415 501 aaPredicted RBP19.21■□□□□ 0.67
CTDSP1-201ENST00000273062 RGS22Q8NE09 1264 aa19.21■□□□□ 0.67
CTDSP1-201ENST00000273062 RIOK3O14730 519 aaKnown RBP19.21■□□□□ 0.66
CTDSP1-201ENST00000273062 U2SURPO15042 1029 aaKnown RBP19.2■□□□□ 0.66
CTDSP1-201ENST00000273062 FKBP5Q13451 457 aaPredicted RBP19.2■□□□□ 0.66
CTDSP1-201ENST00000273062 TNRQ92752 1358 aa19.2■□□□□ 0.66
CTDSP1-201ENST00000273062 HDGFL2Q7Z4V5 671 aaPredicted RBP19.2■□□□□ 0.66
CTDSP1-201ENST00000273062 TEX2Q8IWB9 1127 aa19.19■□□□□ 0.66
CTDSP1-201ENST00000273062 CYP2E1P05181 493 aaPredicted RBP19.19■□□□□ 0.66
CTDSP1-201ENST00000273062 MVPQ14764 893 aaKnown RBP19.18■□□□□ 0.66
CTDSP1-201ENST00000273062 TRERF1Q96PN7 1200 aa19.18■□□□□ 0.66
CTDSP1-201ENST00000273062 DLC1Q96QB1 1528 aa19.18■□□□□ 0.66
CTDSP1-201ENST00000273062 TRIM6-TRIM34B2RNG4 842 aa19.17■□□□□ 0.66
CTDSP1-201ENST00000273062 SLC20A2Q08357 652 aa19.17■□□□□ 0.66
CTDSP1-201ENST00000273062 CHMP4CQ96CF2 233 aa19.17■□□□□ 0.66
CTDSP1-201ENST00000273062 DNAJC2Q99543 621 aaKnown RBP19.17■□□□□ 0.66
CTDSP1-201ENST00000273062 TRIM34Q9BYJ4 488 aa19.17■□□□□ 0.66
CTDSP1-201ENST00000273062 OGFRQ9NZT2 677 aa19.17■□□□□ 0.66
CTDSP1-201ENST00000273062 KIF16BQ96L93 1317 aa19.17■□□□□ 0.66
CTDSP1-201ENST00000273062 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.17■□□□□ 0.66
CTDSP1-201ENST00000273062 COL3A1P02461 1466 aaPredicted RBP19.16■□□□□ 0.66
CTDSP1-201ENST00000273062 CHRM1P11229 460 aaPredicted RBP19.16■□□□□ 0.66
CTDSP1-201ENST00000273062 PHF23Q9BUL5 403 aaPredicted RBP19.16■□□□□ 0.66
CTDSP1-201ENST00000273062 LNPKQ9C0E8 428 aa19.16■□□□□ 0.66
CTDSP1-201ENST00000273062 ERICH4A6NGS2 130 aa19.15■□□□□ 0.66
CTDSP1-201ENST00000273062 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.15■□□□□ 0.66
CTDSP1-201ENST00000273062 FOXD4L5Q5VV16 416 aaPredicted RBP19.15■□□□□ 0.66
CTDSP1-201ENST00000273062 FOXD4L4Q8WXT5 416 aaPredicted RBP19.15■□□□□ 0.66
CTDSP1-201ENST00000273062 TIGD1Q96MW7 591 aa19.14■□□□□ 0.65
CTDSP1-201ENST00000273062 FEZ1Q99689 392 aa19.14■□□□□ 0.65
CTDSP1-201ENST00000273062 SPTLC3Q9NUV7 552 aa19.14■□□□□ 0.65
CTDSP1-201ENST00000273062 ZRANB1Q9UGI0 708 aa19.14■□□□□ 0.65
CTDSP1-201ENST00000273062 ZDHHC9Q9Y397 364 aa19.14■□□□□ 0.65
CTDSP1-201ENST00000273062 WASLO00401 505 aaPredicted RBP19.14■□□□□ 0.65
CTDSP1-201ENST00000273062 TMEM2Q9UHN6 1383 aa19.13■□□□□ 0.65
CTDSP1-201ENST00000273062 GABPB1Q06547 395 aaPredicted RBP19.13■□□□□ 0.65
CTDSP1-201ENST00000273062 NCBP1Q09161 790 aaKnown RBP19.13■□□□□ 0.65
CTDSP1-201ENST00000273062 ZGPATQ8N5A5 531 aaKnown RBP19.13■□□□□ 0.65
CTDSP1-201ENST00000273062 NGEFQ8N5V2 710 aa19.13■□□□□ 0.65
CTDSP1-201ENST00000273062 USP25Q9UHP3 1055 aa19.13■□□□□ 0.65
CTDSP1-201ENST00000273062 ANKRD26Q9UPS8 1709 aa19.13■□□□□ 0.65
CTDSP1-201ENST00000273062 LTKP29376 864 aa19.13■□□□□ 0.65
CTDSP1-201ENST00000273062 CTNNA3Q9UI47 895 aa19.13■□□□□ 0.65
CTDSP1-201ENST00000273062 NAA30Q147X3 362 aaPredicted RBP19.12■□□□□ 0.65
CTDSP1-201ENST00000273062 PLEKHF1Q96S99 279 aa19.12■□□□□ 0.65
CTDSP1-201ENST00000273062 PPIP5K1Q6PFW1 1433 aa19.12■□□□□ 0.65
CTDSP1-201ENST00000273062 UBR1Q8IWV7 1749 aa19.12■□□□□ 0.65
CTDSP1-201ENST00000273062 TULP2O00295 520 aa19.11■□□□□ 0.65
CTDSP1-201ENST00000273062 CTIFO43310 598 aaKnown RBP19.11■□□□□ 0.65
CTDSP1-201ENST00000273062 TERF2Q15554 542 aa19.11■□□□□ 0.65
CTDSP1-201ENST00000273062 NME9Q86XW9 330 aa19.11■□□□□ 0.65
CTDSP1-201ENST00000273062 KIF20BQ96Q89 1820 aa19.11■□□□□ 0.65
CTDSP1-201ENST00000273062 MED14O60244 1454 aa19.11■□□□□ 0.65
CTDSP1-201ENST00000273062 ROBO2Q9HCK4 1378 aa19.1■□□□□ 0.65
CTDSP1-201ENST00000273062 NUCB2P80303 420 aa19.1■□□□□ 0.65
CTDSP1-201ENST00000273062 HDAC1Q13547 482 aaPredicted RBP19.1■□□□□ 0.65
CTDSP1-201ENST00000273062 TBC1D9Q6ZT07 1266 aa19.1■□□□□ 0.65
CTDSP1-201ENST00000273062 NUTM2FA1L443 756 aa19.09■□□□□ 0.65
CTDSP1-201ENST00000273062 TSR2Q969E8 191 aaKnown RBP19.09■□□□□ 0.65
CTDSP1-201ENST00000273062 NUDT16Q96DE0 195 aaKnown RBP19.09■□□□□ 0.65
CTDSP1-201ENST00000273062 TSPY26PQ9H489 355 aa19.09■□□□□ 0.65
CTDSP1-201ENST00000273062 ADGRB2O60241 1585 aa19.09■□□□□ 0.65
CTDSP1-201ENST00000273062 PYCARDQ9ULZ3 195 aa19.09■□□□□ 0.65
CTDSP1-201ENST00000273062 ATP7BP35670 1465 aa19.09■□□□□ 0.65
CTDSP1-201ENST00000273062 CCDC66A2RUB6 948 aa19.08■□□□□ 0.65
CTDSP1-201ENST00000273062 WDR63Q8IWG1 891 aa19.08■□□□□ 0.65
CTDSP1-201ENST00000273062 POLKQ9UBT6 870 aa19.08■□□□□ 0.65
CTDSP1-201ENST00000273062 ADAMTS13Q76LX8 1427 aa19.08■□□□□ 0.65
CTDSP1-201ENST00000273062 DIAPH1O60610 1272 aaKnown RBP19.08■□□□□ 0.64
CTDSP1-201ENST00000273062 CCDC27Q2M243 656 aa19.08■□□□□ 0.64
CTDSP1-201ENST00000273062 SLC26A8Q96RN1 970 aa19.08■□□□□ 0.64
CTDSP1-201ENST00000273062 DDX41Q9UJV9 622 aaKnown RBP19.08■□□□□ 0.64
CTDSP1-201ENST00000273062 PRR36Q9H6K5 1346 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms