RNA–Protein interactions for RNA: ENST00000272091.7

SDE2-201, Transcript of SDE2 telomere maintenance homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDE2, Length 3,975 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDE2-201ENST00000272091 PANK1Q8TE04 598 aa15.67■□□□□ 0.1
SDE2-201ENST00000272091 ABCC6O95255 1503 aa15.66■□□□□ 0.1
SDE2-201ENST00000272091 PDE3AQ14432 1141 aa15.66■□□□□ 0.1
SDE2-201ENST00000272091 ZC3H6P61129 1189 aaKnown RBP15.66■□□□□ 0.1
SDE2-201ENST00000272091 ANKRD24Q8TF21 1146 aa15.66■□□□□ 0.1
SDE2-201ENST00000272091 FRAT1Q92837 279 aaPredicted RBP15.65■□□□□ 0.1
SDE2-201ENST00000272091 VAMP4O75379 141 aa15.65■□□□□ 0.1
SDE2-201ENST00000272091 CHL1O00533 1208 aa15.64■□□□□ 0.09
SDE2-201ENST00000272091 C8orf58Q8NAV2 365 aa15.64■□□□□ 0.09
SDE2-201ENST00000272091 GAS2L2Q8NHY3 880 aa15.64■□□□□ 0.09
SDE2-201ENST00000272091 TSHZ2Q9NRE2 1034 aa15.64■□□□□ 0.09
SDE2-201ENST00000272091 ERBB3P21860 1342 aa15.63■□□□□ 0.09
SDE2-201ENST00000272091 SMC4Q9NTJ3 1288 aa15.63■□□□□ 0.09
SDE2-201ENST00000272091 MAP3K5Q99683 1374 aa15.63■□□□□ 0.09
SDE2-201ENST00000272091 CPDO75976 1380 aa15.62■□□□□ 0.09
SDE2-201ENST00000272091 ROBO1Q9Y6N7 1651 aa15.62■□□□□ 0.09
SDE2-201ENST00000272091 ALDH1L2Q3SY69 923 aa15.62■□□□□ 0.09
SDE2-201ENST00000272091 COG6Q9Y2V7 657 aa15.62■□□□□ 0.09
SDE2-201ENST00000272091 KRT24Q2M2I5 525 aa15.61■□□□□ 0.09
SDE2-201ENST00000272091 KIAA0232Q92628 1395 aa15.61■□□□□ 0.09
SDE2-201ENST00000272091 KDM2BQ8NHM5 1336 aa15.61■□□□□ 0.09
SDE2-201ENST00000272091 HTATSF1O43719 755 aaKnown RBP15.61■□□□□ 0.09
SDE2-201ENST00000272091 CANXP27824 592 aaKnown RBP15.61■□□□□ 0.09
SDE2-201ENST00000272091 IL17REQ8NFR9 667 aa15.61■□□□□ 0.09
SDE2-201ENST00000272091 ADAMTS7Q9UKP4 1686 aa15.61■□□□□ 0.09
SDE2-201ENST00000272091 GNAT3A8MTJ3 354 aa15.6■□□□□ 0.09
SDE2-201ENST00000272091 BRPF1P55201 1214 aaPredicted RBP15.6■□□□□ 0.09
SDE2-201ENST00000272091 NOB1Q9ULX3 412 aaKnown RBP15.6■□□□□ 0.09
SDE2-201ENST00000272091 TRIM27P14373 513 aa15.6■□□□□ 0.09
SDE2-201ENST00000272091 TWISTNBQ3B726 338 aaPredicted RBP15.6■□□□□ 0.09
SDE2-201ENST00000272091 MIS18AQ9NYP9 233 aa15.6■□□□□ 0.09
SDE2-201ENST00000272091 KDM3BQ7LBC6 1761 aa15.6■□□□□ 0.09
SDE2-201ENST00000272091 ELL2O00472 640 aaPredicted RBP15.6■□□□□ 0.09
SDE2-201ENST00000272091 MRPL50Q8N5N7 158 aaKnown RBP15.6■□□□□ 0.09
SDE2-201ENST00000272091 CHRNA2Q15822 529 aa15.59■□□□□ 0.09
SDE2-201ENST00000272091 ZKSCAN2Q63HK3 967 aa15.59■□□□□ 0.09
SDE2-201ENST00000272091 CLUAP1Q96AJ1 413 aa15.59■□□□□ 0.09
SDE2-201ENST00000272091 CEMIPQ8WUJ3 1361 aa15.59■□□□□ 0.09
SDE2-201ENST00000272091 SIPA1L3O60292 1781 aaPredicted RBP15.59■□□□□ 0.09
SDE2-201ENST00000272091 RTF1Q92541 710 aaKnown RBP15.58■□□□□ 0.09
SDE2-201ENST00000272091 ZNF428Q96B54 188 aa15.58■□□□□ 0.09
SDE2-201ENST00000272091 AHDC1Q5TGY3 1603 aaPredicted RBP15.57■□□□□ 0.08
SDE2-201ENST00000272091 ATF7IPQ6VMQ6 1270 aa15.57■□□□□ 0.08
SDE2-201ENST00000272091 PKD1L3Q7Z443 1732 aa15.57■□□□□ 0.08
SDE2-201ENST00000272091 MEGF6O75095 1541 aa15.57■□□□□ 0.08
SDE2-201ENST00000272091 TCERG1O14776 1098 aaKnown RBP15.56■□□□□ 0.08
SDE2-201ENST00000272091 DZIP1LQ8IYY4 767 aaKnown RBP15.56■□□□□ 0.08
SDE2-201ENST00000272091 KIF16BQ96L93 1317 aa15.56■□□□□ 0.08
SDE2-201ENST00000272091 MVPQ14764 893 aaKnown RBP15.55■□□□□ 0.08
SDE2-201ENST00000272091 LGR6Q9HBX8 967 aa15.55■□□□□ 0.08
SDE2-201ENST00000272091 COL22A1Q8NFW1 1626 aaPredicted RBP15.55■□□□□ 0.08
SDE2-201ENST00000272091 TSPYL4Q9UJ04 414 aa15.54■□□□□ 0.08
SDE2-201ENST00000272091 SCN11AQ9UI33 1791 aa15.54■□□□□ 0.08
SDE2-201ENST00000272091 SKAP1Q86WV1 359 aa15.53■□□□□ 0.08
SDE2-201ENST00000272091 COL5A2P05997 1499 aaPredicted RBP15.53■□□□□ 0.08
SDE2-201ENST00000272091 RGS12O14924 1447 aa15.53■□□□□ 0.08
SDE2-201ENST00000272091 AKAP4Q5JQC9 854 aa15.53■□□□□ 0.08
SDE2-201ENST00000272091 ZNF530Q6P9A1 599 aaPredicted RBP15.53■□□□□ 0.08
SDE2-201ENST00000272091 IGHDP01880 384 aa15.52■□□□□ 0.08
SDE2-201ENST00000272091 PLEKHO1Q53GL0 409 aaPredicted RBP15.52■□□□□ 0.08
SDE2-201ENST00000272091 TMEM57Q8N5G2 664 aa15.52■□□□□ 0.08
SDE2-201ENST00000272091 AMOTQ4VCS5 1084 aa15.52■□□□□ 0.07
SDE2-201ENST00000272091 COL16A1Q07092 1604 aaPredicted RBP15.52■□□□□ 0.07
SDE2-201ENST00000272091 OVOS2A0A0G2JMS6 1433 aa15.52■□□□□ 0.07
SDE2-201ENST00000272091 NLRP2Q9NX02 1062 aa15.51■□□□□ 0.07
SDE2-201ENST00000272091 PCDHB15Q9Y5E8 787 aa15.51■□□□□ 0.07
SDE2-201ENST00000272091 SHANK3Q9BYB0 1731 aa15.51■□□□□ 0.07
SDE2-201ENST00000272091 FTSJ3Q8IY81 847 aaKnown RBP15.51■□□□□ 0.07
SDE2-201ENST00000272091 PARP4Q9UKK3 1724 aaKnown RBP15.51■□□□□ 0.07
SDE2-201ENST00000272091 TAF7Q15545 349 aaPredicted RBP15.51■□□□□ 0.07
SDE2-201ENST00000272091 ARHGAP45Q92619 1136 aa15.51■□□□□ 0.07
SDE2-201ENST00000272091 CENPQQ7L2Z9 268 aaPredicted RBP15.5■□□□□ 0.07
SDE2-201ENST00000272091 ABCC4O15439 1325 aa15.5■□□□□ 0.07
SDE2-201ENST00000272091 MPRIPQ6WCQ1 1025 aa15.5■□□□□ 0.07
SDE2-201ENST00000272091 IPO8O15397 1037 aaKnown RBP15.5■□□□□ 0.07
SDE2-201ENST00000272091 BABAM1Q9NWV8 329 aa15.5■□□□□ 0.07
SDE2-201ENST00000272091 KDM6AO15550 1401 aaPredicted RBP15.49■□□□□ 0.07
SDE2-201ENST00000272091 RNMTO43148 476 aaKnown RBP15.49■□□□□ 0.07
SDE2-201ENST00000272091 MS4A1P11836 297 aa15.49■□□□□ 0.07
SDE2-201ENST00000272091 PRDM11Q9NQV5 511 aa15.49■□□□□ 0.07
SDE2-201ENST00000272091 PHLPP1O60346 1717 aa15.49■□□□□ 0.07
SDE2-201ENST00000272091 ITPRIPQ8IWB1 547 aa15.48■□□□□ 0.07
SDE2-201ENST00000272091 WDR17Q8IZU2 1322 aa15.48■□□□□ 0.07
SDE2-201ENST00000272091 PLEKHG2Q9H7P9 1386 aa15.48■□□□□ 0.07
SDE2-201ENST00000272091 AAMPQ13685 434 aa15.48■□□□□ 0.07
SDE2-201ENST00000272091 CSB-PGBD3P0DP91 1061 aa15.47■□□□□ 0.07
SDE2-201ENST00000272091 KCNQ3O43525 872 aa15.47■□□□□ 0.07
SDE2-201ENST00000272091 COL14A1Q05707 1796 aaKnown RBP15.46■□□□□ 0.07
SDE2-201ENST00000272091 DDX19BQ9UMR2 479 aa15.46■□□□□ 0.07
SDE2-201ENST00000272091 MRC1P22897 1456 aa15.46■□□□□ 0.07
SDE2-201ENST00000272091 C1orf141Q5JVX7 400 aa15.46■□□□□ 0.06
SDE2-201ENST00000272091 RAPGEF4Q8WZA2 1011 aa15.46■□□□□ 0.06
SDE2-201ENST00000272091 ZBTB40Q9NUA8 1239 aa15.46■□□□□ 0.06
SDE2-201ENST00000272091 CACNA1FO60840 1977 aa15.46■□□□□ 0.06
SDE2-201ENST00000272091 N4BP2Q86UW6 1770 aaPredicted RBP15.46■□□□□ 0.06
SDE2-201ENST00000272091 PHKG2P15735 406 aa15.45■□□□□ 0.06
SDE2-201ENST00000272091 TATP17735 454 aaPredicted RBP15.45■□□□□ 0.06
SDE2-201ENST00000272091 G2E3Q7L622 706 aa15.45■□□□□ 0.06
SDE2-201ENST00000272091 EIF4A1P60842 406 aaKnown RBP15.44■□□□□ 0.06
SDE2-201ENST00000272091 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.44■□□□□ 0.064e-6■□□□□ 11.2
Retrieved 100 of 20,778 RNA–protein pairs in 165.4 ms