RNA–Protein interactions for RNA: ENST00000271971.6

CAPN9-201, Transcript of calpain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN9, Length 2,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-201ENST00000271971 CALD1Q05682 793 aaKnown RBP16.19■□□□□ 0.18
CAPN9-201ENST00000271971 IFT57Q9NWB7 429 aa16.19■□□□□ 0.18
CAPN9-201ENST00000271971 VIRMAQ69YN4 1812 aaKnown RBP16.19■□□□□ 0.18
CAPN9-201ENST00000271971 LRRC37A3O60309 1634 aa16.19■□□□□ 0.18
CAPN9-201ENST00000271971 PIP4K2BP78356 416 aa16.19■□□□□ 0.18
CAPN9-201ENST00000271971 MBIPQ9NS73 344 aa16.19■□□□□ 0.18
CAPN9-201ENST00000271971 ZNF853P0CG23 659 aa16.18■□□□□ 0.18
CAPN9-201ENST00000271971 RARSP54136 660 aaKnown RBP16.18■□□□□ 0.18
CAPN9-201ENST00000271971 NLRP2Q9NX02 1062 aa16.18■□□□□ 0.18
CAPN9-201ENST00000271971 CSB-PGBD3P0DP91 1061 aa16.18■□□□□ 0.18
CAPN9-201ENST00000271971 GNAI1P63096 354 aa16.18■□□□□ 0.18
CAPN9-201ENST00000271971 COL16A1Q07092 1604 aaPredicted RBP16.17■□□□□ 0.18
CAPN9-201ENST00000271971 EXOC6Q8TAG9 804 aa16.17■□□□□ 0.18
CAPN9-201ENST00000271971 RTF1Q92541 710 aaKnown RBP16.17■□□□□ 0.18
CAPN9-201ENST00000271971 CFAP44Q96MT7 982 aa16.17■□□□□ 0.18
CAPN9-201ENST00000271971 MAP3K5Q99683 1374 aa16.17■□□□□ 0.18
CAPN9-201ENST00000271971 CRB1P82279 1406 aa16.17■□□□□ 0.18
CAPN9-201ENST00000271971 GNAT3A8MTJ3 354 aa16.15■□□□□ 0.18
CAPN9-201ENST00000271971 COL22A1Q8NFW1 1626 aaPredicted RBP16.15■□□□□ 0.18
CAPN9-201ENST00000271971 PPP4R2Q9NY27 417 aa16.15■□□□□ 0.18
CAPN9-201ENST00000271971 B4GALNT3Q6L9W6 998 aa16.15■□□□□ 0.18
CAPN9-201ENST00000271971 CRBNQ96SW2 442 aa16.15■□□□□ 0.18
CAPN9-201ENST00000271971 MEGF6O75095 1541 aa16.14■□□□□ 0.18
CAPN9-201ENST00000271971 COL5A2P05997 1499 aaPredicted RBP16.14■□□□□ 0.17
CAPN9-201ENST00000271971 ERICH6Q7L0X2 663 aa16.14■□□□□ 0.17
CAPN9-201ENST00000271971 TSPYL6Q8N831 410 aa16.14■□□□□ 0.17
CAPN9-201ENST00000271971 ELL2O00472 640 aaPredicted RBP16.14■□□□□ 0.17
CAPN9-201ENST00000271971 FRAT1Q92837 279 aaPredicted RBP16.14■□□□□ 0.17
CAPN9-201ENST00000271971 MIS18AQ9NYP9 233 aa16.14■□□□□ 0.17
CAPN9-201ENST00000271971 TOM1O60784 492 aa16.13■□□□□ 0.17
CAPN9-201ENST00000271971 ZNF530Q6P9A1 599 aaPredicted RBP16.13■□□□□ 0.17
CAPN9-201ENST00000271971 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.13■□□□□ 0.17
CAPN9-201ENST00000271971 CANXP27824 592 aaKnown RBP16.13■□□□□ 0.17
CAPN9-201ENST00000271971 IL17REQ8NFR9 667 aa16.13■□□□□ 0.17
CAPN9-201ENST00000271971 UBAP1LF5GYI3 381 aa16.12■□□□□ 0.17
CAPN9-201ENST00000271971 KRT24Q2M2I5 525 aa16.12■□□□□ 0.17
CAPN9-201ENST00000271971 CT47B1P0C2W7 299 aaPredicted RBP16.12■□□□□ 0.17
CAPN9-201ENST00000271971 C8orf58Q8NAV2 365 aa16.12■□□□□ 0.17
CAPN9-201ENST00000271971 SSH1Q8WYL5 1049 aa16.12■□□□□ 0.17
CAPN9-201ENST00000271971 SMC4Q9NTJ3 1288 aa16.12■□□□□ 0.17
CAPN9-201ENST00000271971 CHL1O00533 1208 aa16.11■□□□□ 0.17
CAPN9-201ENST00000271971 PLEKHO1Q53GL0 409 aaPredicted RBP16.11■□□□□ 0.17
CAPN9-201ENST00000271971 TNNQ9UQP3 1299 aa16.11■□□□□ 0.17
CAPN9-201ENST00000271971 RAPGEF4Q8WZA2 1011 aa16.11■□□□□ 0.17
CAPN9-201ENST00000271971 STRN4Q9NRL3 753 aa16.11■□□□□ 0.17
CAPN9-201ENST00000271971 WDR17Q8IZU2 1322 aa16.1■□□□□ 0.17
CAPN9-201ENST00000271971 HTATSF1O43719 755 aaKnown RBP16.1■□□□□ 0.17
CAPN9-201ENST00000271971 LGR6Q9HBX8 967 aa16.09■□□□□ 0.17
CAPN9-201ENST00000271971 PKD1L3Q7Z443 1732 aa16.09■□□□□ 0.17
CAPN9-201ENST00000271971 TWISTNBQ3B726 338 aaPredicted RBP16.09■□□□□ 0.17
CAPN9-201ENST00000271971 AMOTQ4VCS5 1084 aa16.09■□□□□ 0.17
CAPN9-201ENST00000271971 TOM1L2Q6ZVM7 507 aa16.09■□□□□ 0.17
CAPN9-201ENST00000271971 TSPYL4Q9UJ04 414 aa16.09■□□□□ 0.17
CAPN9-201ENST00000271971 COL14A1Q05707 1796 aaKnown RBP16.08■□□□□ 0.17
CAPN9-201ENST00000271971 TCERG1O14776 1098 aaKnown RBP16.08■□□□□ 0.17
CAPN9-201ENST00000271971 VAMP4O75379 141 aa16.08■□□□□ 0.17
CAPN9-201ENST00000271971 MPRIPQ6WCQ1 1025 aa16.08■□□□□ 0.17
CAPN9-201ENST00000271971 PANK1Q8TE04 598 aa16.08■□□□□ 0.17
CAPN9-201ENST00000271971 CEMIPQ8WUJ3 1361 aa16.08■□□□□ 0.16
CAPN9-201ENST00000271971 DEKP35659 375 aaKnown RBP16.08■□□□□ 0.16
CAPN9-201ENST00000271971 AKAP4Q5JQC9 854 aa16.08■□□□□ 0.16
CAPN9-201ENST00000271971 PARP4Q9UKK3 1724 aaKnown RBP16.08■□□□□ 0.16
CAPN9-201ENST00000271971 TATP17735 454 aaPredicted RBP16.07■□□□□ 0.16
CAPN9-201ENST00000271971 C1orf141Q5JVX7 400 aa16.07■□□□□ 0.16
CAPN9-201ENST00000271971 LARP1Q6PKG0 1096 aaKnown RBP16.07■□□□□ 0.16
CAPN9-201ENST00000271971 PLCH1Q4KWH8 1693 aa16.06■□□□□ 0.16
CAPN9-201ENST00000271971 RLBP1P12271 317 aa16.06■□□□□ 0.16
CAPN9-201ENST00000271971 CLUAP1Q96AJ1 413 aa16.06■□□□□ 0.16
CAPN9-201ENST00000271971 CCDC136Q96JN2 1154 aa16.06■□□□□ 0.16
CAPN9-201ENST00000271971 BTG4Q9NY30 223 aa16.06■□□□□ 0.16
CAPN9-201ENST00000271971 KDM3BQ7LBC6 1761 aa16.06■□□□□ 0.16
CAPN9-201ENST00000271971 SCN11AQ9UI33 1791 aa16.06■□□□□ 0.16
CAPN9-201ENST00000271971 EVA1CP58658 441 aa16.05■□□□□ 0.16
CAPN9-201ENST00000271971 ADAMTS7Q9UKP4 1686 aa16.05■□□□□ 0.16
CAPN9-201ENST00000271971 SIPA1L3O60292 1781 aaPredicted RBP16.05■□□□□ 0.16
CAPN9-201ENST00000271971 ADAMTS2O95450 1211 aa16.05■□□□□ 0.16
CAPN9-201ENST00000271971 COG6Q9Y2V7 657 aa16.05■□□□□ 0.16
CAPN9-201ENST00000271971 ALDH1L2Q3SY69 923 aa16.04■□□□□ 0.16
CAPN9-201ENST00000271971 USP35Q9P2H5 1018 aa16.04■□□□□ 0.16
CAPN9-201ENST00000271971 NOB1Q9ULX3 412 aaKnown RBP16.04■□□□□ 0.16
CAPN9-201ENST00000271971 OVOS2A0A0G2JMS6 1433 aa16.04■□□□□ 0.16
CAPN9-201ENST00000271971 PDE3AQ14432 1141 aa16.04■□□□□ 0.16
CAPN9-201ENST00000271971 TAF7Q15545 349 aaPredicted RBP16.04■□□□□ 0.16
CAPN9-201ENST00000271971 ZKSCAN2Q63HK3 967 aa16.04■□□□□ 0.16
CAPN9-201ENST00000271971 SHANK3Q9BYB0 1731 aa16.03■□□□□ 0.16
CAPN9-201ENST00000271971 NUTM2BA6NNL0 878 aaPredicted RBP16.03■□□□□ 0.16
CAPN9-201ENST00000271971 NUTM2EB1AL46 878 aaPredicted RBP16.03■□□□□ 0.16
CAPN9-201ENST00000271971 RNMTO43148 476 aaKnown RBP16.03■□□□□ 0.16
CAPN9-201ENST00000271971 NUTM2AQ8IVF1 878 aaPredicted RBP16.03■□□□□ 0.16
CAPN9-201ENST00000271971 KDM6AO15550 1401 aaPredicted RBP16.03■□□□□ 0.16
CAPN9-201ENST00000271971 TRIM27P14373 513 aa16.02■□□□□ 0.16
CAPN9-201ENST00000271971 SPG7Q9UQ90 795 aa16.02■□□□□ 0.16
CAPN9-201ENST00000271971 TEFQ10587 303 aa16.02■□□□□ 0.15
CAPN9-201ENST00000271971 MRPL50Q8N5N7 158 aaKnown RBP16.02■□□□□ 0.15
CAPN9-201ENST00000271971 CERKQ8TCT0 537 aa16.02■□□□□ 0.15
CAPN9-201ENST00000271971 ZNF428Q96B54 188 aa16.02■□□□□ 0.15
CAPN9-201ENST00000271971 CARD10Q9BWT7 1032 aa16.02■□□□□ 0.15
CAPN9-201ENST00000271971 KIF16BQ96L93 1317 aa16.01■□□□□ 0.15
CAPN9-201ENST00000271971 CYP27B1O15528 508 aa16.01■□□□□ 0.15
CAPN9-201ENST00000271971 PHKG2P15735 406 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms