RNA–Protein interactions for RNA: ENST00000269485.11

TNFRSF11A-201, Transcript of TNF receptor superfamily member 11a, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF11A, Length 3,591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-201ENST00000269485 OTUD7AQ8TE49 926 aaPredicted RBP17.53■□□□□ 0.4
TNFRSF11A-201ENST00000269485 MEIS3Q99687 375 aa17.53■□□□□ 0.4
TNFRSF11A-201ENST00000269485 C1orf141Q5JVX7 400 aa17.53■□□□□ 0.4
TNFRSF11A-201ENST00000269485 KCNQ3O43525 872 aa17.53■□□□□ 0.4
TNFRSF11A-201ENST00000269485 MAPK8IP2Q13387 824 aaPredicted RBP17.53■□□□□ 0.4
TNFRSF11A-201ENST00000269485 HDGFL1Q5TGJ6 251 aa17.53■□□□□ 0.4
TNFRSF11A-201ENST00000269485 LMOD3Q0VAK6 560 aa17.52■□□□□ 0.4
TNFRSF11A-201ENST00000269485 LGR6Q9HBX8 967 aa17.52■□□□□ 0.4
TNFRSF11A-201ENST00000269485 NUTM2BA6NNL0 878 aaPredicted RBP17.52■□□□□ 0.39
TNFRSF11A-201ENST00000269485 NUTM2EB1AL46 878 aaPredicted RBP17.52■□□□□ 0.39
TNFRSF11A-201ENST00000269485 NUTM2AQ8IVF1 878 aaPredicted RBP17.52■□□□□ 0.39
TNFRSF11A-201ENST00000269485 INSRP06213 1382 aa17.52■□□□□ 0.39
TNFRSF11A-201ENST00000269485 ARHGEF40Q8TER5 1519 aa17.51■□□□□ 0.39
TNFRSF11A-201ENST00000269485 GOLGA6L3A6NEY3 463 aa17.51■□□□□ 0.39
TNFRSF11A-201ENST00000269485 CALD1Q05682 793 aaKnown RBP17.51■□□□□ 0.39
TNFRSF11A-201ENST00000269485 C8orf34Q49A92 452 aa17.51■□□□□ 0.39
TNFRSF11A-201ENST00000269485 VAMP4O75379 141 aa17.51■□□□□ 0.39
TNFRSF11A-201ENST00000269485 PIP4K2BP78356 416 aa17.51■□□□□ 0.39
TNFRSF11A-201ENST00000269485 PUS7Q96PZ0 661 aaKnown RBP17.51■□□□□ 0.39
TNFRSF11A-201ENST00000269485 PTPRUQ92729 1446 aa17.51■□□□□ 0.39
TNFRSF11A-201ENST00000269485 CPS1P31327 1500 aa17.5■□□□□ 0.39
TNFRSF11A-201ENST00000269485 RBM42Q9BTD8 480 aaKnown RBP17.5■□□□□ 0.39
TNFRSF11A-201ENST00000269485 ZFYVE9O95405 1425 aa17.5■□□□□ 0.39
TNFRSF11A-201ENST00000269485 BECN1Q14457 450 aa17.49■□□□□ 0.39
TNFRSF11A-201ENST00000269485 NINLQ9Y2I6 1382 aa17.49■□□□□ 0.39
TNFRSF11A-201ENST00000269485 EDC4Q6P2E9 1401 aaKnown RBP17.49■□□□□ 0.39
TNFRSF11A-201ENST00000269485 EVA1CP58658 441 aa17.49■□□□□ 0.39
TNFRSF11A-201ENST00000269485 PHAXQ9H814 394 aaKnown RBP17.49■□□□□ 0.39
TNFRSF11A-201ENST00000269485 CD163L1Q9NR16 1453 aa17.49■□□□□ 0.39
TNFRSF11A-201ENST00000269485 ADAMTS13Q76LX8 1427 aa17.49■□□□□ 0.39
TNFRSF11A-201ENST00000269485 NAP1L2Q9ULW6 460 aaPredicted RBP17.49■□□□□ 0.39
TNFRSF11A-201ENST00000269485 SETBP1Q9Y6X0 1596 aa17.48■□□□□ 0.39
TNFRSF11A-201ENST00000269485 KIF16BQ96L93 1317 aa17.48■□□□□ 0.39
TNFRSF11A-201ENST00000269485 KRT28Q7Z3Y7 464 aa17.48■□□□□ 0.39
TNFRSF11A-201ENST00000269485 SRCAPQ6ZRS2 3230 aa17.48■□□□□ 0.39
TNFRSF11A-201ENST00000269485 CFAP44Q96MT7 982 aa17.48■□□□□ 0.39
TNFRSF11A-201ENST00000269485 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.47■□□□□ 0.39
TNFRSF11A-201ENST00000269485 ARHGEF28Q8N1W1 1705 aaKnown RBP17.47■□□□□ 0.39
TNFRSF11A-201ENST00000269485 PRAMEF22A3QJZ6 481 aa17.47■□□□□ 0.39
TNFRSF11A-201ENST00000269485 HOXC9P31274 260 aa17.46■□□□□ 0.39
TNFRSF11A-201ENST00000269485 NUTM1Q86Y26 1132 aa17.46■□□□□ 0.39
TNFRSF11A-201ENST00000269485 RAPGEF4Q8WZA2 1011 aa17.46■□□□□ 0.39
TNFRSF11A-201ENST00000269485 ZC3H13Q5T200 1668 aaKnown RBP17.46■□□□□ 0.39
TNFRSF11A-201ENST00000269485 NBPF6Q5VWK0 638 aa17.46■□□□□ 0.39
TNFRSF11A-201ENST00000269485 NBPF4Q96M43 638 aa17.46■□□□□ 0.39
TNFRSF11A-201ENST00000269485 C9orf78Q9NZ63 289 aaPredicted RBP17.46■□□□□ 0.39
TNFRSF11A-201ENST00000269485 CCDC27Q2M243 656 aa17.45■□□□□ 0.38
TNFRSF11A-201ENST00000269485 BCL11BQ9C0K0 894 aaPredicted RBP17.45■□□□□ 0.38
TNFRSF11A-201ENST00000269485 KDM2BQ8NHM5 1336 aa17.45■□□□□ 0.38
TNFRSF11A-201ENST00000269485 PLEKHG3A1L390 1219 aa17.45■□□□□ 0.38
TNFRSF11A-201ENST00000269485 ADAMTS2O95450 1211 aa17.45■□□□□ 0.38
TNFRSF11A-201ENST00000269485 C22orf23Q9BZE7 217 aa17.45■□□□□ 0.38
TNFRSF11A-201ENST00000269485 PLEKHG1Q9ULL1 1385 aa17.45■□□□□ 0.38
TNFRSF11A-201ENST00000269485 XRCC6P12956 609 aaKnown RBP eCLIP17.45■□□□□ 0.38
TNFRSF11A-201ENST00000269485 SURF6O75683 361 aaKnown RBP17.44■□□□□ 0.38
TNFRSF11A-201ENST00000269485 KCNJ4P48050 445 aa17.44■□□□□ 0.38
TNFRSF11A-201ENST00000269485 TOM1L2Q6ZVM7 507 aa17.44■□□□□ 0.38
TNFRSF11A-201ENST00000269485 IFT57Q9NWB7 429 aa17.44■□□□□ 0.38
TNFRSF11A-201ENST00000269485 GCP02774 474 aa17.43■□□□□ 0.38
TNFRSF11A-201ENST00000269485 HSCBQ8IWL3 235 aa17.43■□□□□ 0.38
TNFRSF11A-201ENST00000269485 BTBD11A6QL63 1104 aa17.43■□□□□ 0.38
TNFRSF11A-201ENST00000269485 AAMPQ13685 434 aa17.43■□□□□ 0.38
TNFRSF11A-201ENST00000269485 PRDM11Q9NQV5 511 aa17.43■□□□□ 0.38
TNFRSF11A-201ENST00000269485 GNAT3A8MTJ3 354 aa17.42■□□□□ 0.38
TNFRSF11A-201ENST00000269485 PPFIA3O75145 1194 aa17.42■□□□□ 0.38
TNFRSF11A-201ENST00000269485 NLRP1Q9C000 1473 aa17.42■□□□□ 0.38
TNFRSF11A-201ENST00000269485 CHD1LQ86WJ1 897 aa17.42■□□□□ 0.38
TNFRSF11A-201ENST00000269485 MRPL50Q8N5N7 158 aaKnown RBP17.42■□□□□ 0.38
TNFRSF11A-201ENST00000269485 ANP32BQ92688 251 aaKnown RBP17.42■□□□□ 0.38
TNFRSF11A-201ENST00000269485 TAF7Q15545 349 aaPredicted RBP17.41■□□□□ 0.38
TNFRSF11A-201ENST00000269485 ATP5J2-PTCD1G3V325 749 aa17.41■□□□□ 0.38
TNFRSF11A-201ENST00000269485 KIAA1210Q9ULL0 1709 aa17.41■□□□□ 0.38
TNFRSF11A-201ENST00000269485 API5Q9BZZ5 524 aaKnown RBP17.41■□□□□ 0.38
TNFRSF11A-201ENST00000269485 IFT172Q9UG01 1749 aa17.4■□□□□ 0.38
TNFRSF11A-201ENST00000269485 KIF13AQ9H1H9 1805 aa17.4■□□□□ 0.38
TNFRSF11A-201ENST00000269485 USP6P35125 1406 aa17.4■□□□□ 0.38
TNFRSF11A-201ENST00000269485 ANO2Q9NQ90 1003 aa17.4■□□□□ 0.38
TNFRSF11A-201ENST00000269485 LRRFIP2Q9Y608 721 aaKnown RBP17.4■□□□□ 0.38
TNFRSF11A-201ENST00000269485 KDM4AO75164 1064 aa17.4■□□□□ 0.38
TNFRSF11A-201ENST00000269485 GAS2L2Q8NHY3 880 aa17.4■□□□□ 0.38
TNFRSF11A-201ENST00000269485 ANKRD24Q8TF21 1146 aa17.4■□□□□ 0.38
TNFRSF11A-201ENST00000269485 PHF23Q9BUL5 403 aaPredicted RBP17.39■□□□□ 0.37
TNFRSF11A-201ENST00000269485 CHPF2Q9P2E5 772 aa17.39■□□□□ 0.37
TNFRSF11A-201ENST00000269485 PI4KAP2A4QPH2 592 aa17.39■□□□□ 0.37
TNFRSF11A-201ENST00000269485 PI4KAP1Q8N8J0 262 aa17.39■□□□□ 0.37
TNFRSF11A-201ENST00000269485 MYO3AQ8NEV4 1616 aa17.39■□□□□ 0.37
TNFRSF11A-201ENST00000269485 RIC3Q7Z5B4 369 aa17.38■□□□□ 0.37
TNFRSF11A-201ENST00000269485 AGLP35573 1532 aa17.38■□□□□ 0.37
TNFRSF11A-201ENST00000269485 KLHDC4Q8TBB5 520 aa17.38■□□□□ 0.37
TNFRSF11A-201ENST00000269485 UBTFL1P0CB47 393 aaPredicted RBP17.38■□□□□ 0.37
TNFRSF11A-201ENST00000269485 CWF19L2Q2TBE0 894 aaKnown RBP17.38■□□□□ 0.37
TNFRSF11A-201ENST00000269485 IL17REQ8NFR9 667 aa17.38■□□□□ 0.37
TNFRSF11A-201ENST00000269485 AXIN2Q9Y2T1 843 aa17.38■□□□□ 0.37
TNFRSF11A-201ENST00000269485 SPATA31D1Q6ZQQ2 1576 aa17.37■□□□□ 0.37
TNFRSF11A-201ENST00000269485 KIAA1211Q6ZU35 1233 aa17.37■□□□□ 0.37
TNFRSF11A-201ENST00000269485 ATP7BP35670 1465 aa17.37■□□□□ 0.37
TNFRSF11A-201ENST00000269485 FOSBP53539 338 aa17.37■□□□□ 0.37
TNFRSF11A-201ENST00000269485 FLIIQ13045 1269 aa17.37■□□□□ 0.37
TNFRSF11A-201ENST00000269485 TTC5Q8N0Z6 440 aa17.37■□□□□ 0.37
TNFRSF11A-201ENST00000269485 FLT4P35916 1363 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms