RNA–Protein interactions for RNA: ENST00000268099.13

SCAMP2-201, Transcript of secretory carrier membrane protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP2, Length 2,453 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-201ENST00000268099 NPATQ14207 1427 aa18.77■□□□□ 0.6
SCAMP2-201ENST00000268099 BRD1O95696 1058 aa18.77■□□□□ 0.6
SCAMP2-201ENST00000268099 HMGN5P82970 282 aaKnown RBP18.77■□□□□ 0.6
SCAMP2-201ENST00000268099 ZNF710Q8N1W2 664 aa18.77■□□□□ 0.6
SCAMP2-201ENST00000268099 JARID2Q92833 1246 aaPredicted RBP18.77■□□□□ 0.6
SCAMP2-201ENST00000268099 TERF2IPQ9NYB0 399 aa18.77■□□□□ 0.6
SCAMP2-201ENST00000268099 ZBTB7CA1YPR0 619 aa18.77■□□□□ 0.59
SCAMP2-201ENST00000268099 PIBF1Q8WXW3 757 aa18.77■□□□□ 0.59
SCAMP2-201ENST00000268099 TMX3Q96JJ7 454 aa18.77■□□□□ 0.59
SCAMP2-201ENST00000268099 ERC2O15083 957 aa18.76■□□□□ 0.59
SCAMP2-201ENST00000268099 GTF2F1P35269 517 aaKnown RBP eCLIP18.76■□□□□ 0.59
SCAMP2-201ENST00000268099 ATP10DQ9P241 1426 aa18.76■□□□□ 0.59
SCAMP2-201ENST00000268099 KIF20BQ96Q89 1820 aa18.76■□□□□ 0.59
SCAMP2-201ENST00000268099 ANKRD44Q8N8A2 993 aa18.76■□□□□ 0.59
SCAMP2-201ENST00000268099 PHACTR3Q96KR7 559 aa18.76■□□□□ 0.59
SCAMP2-201ENST00000268099 CD163L1Q9NR16 1453 aa18.76■□□□□ 0.59
SCAMP2-201ENST00000268099 ZNF853P0CG23 659 aa18.75■□□□□ 0.59
SCAMP2-201ENST00000268099 TSC1Q92574 1164 aa18.75■□□□□ 0.59
SCAMP2-201ENST00000268099 PHF14O94880 888 aa18.75■□□□□ 0.59
SCAMP2-201ENST00000268099 NOLC1Q14978 699 aaKnown RBP eCLIP18.75■□□□□ 0.59
SCAMP2-201ENST00000268099 KIDINS220Q9ULH0 1771 aa18.75■□□□□ 0.59
SCAMP2-201ENST00000268099 NEK4P51957 841 aa18.74■□□□□ 0.59
SCAMP2-201ENST00000268099 SMARCA5O60264 1052 aaPredicted RBP18.74■□□□□ 0.59
SCAMP2-201ENST00000268099 C8orf58Q8NAV2 365 aa18.74■□□□□ 0.59
SCAMP2-201ENST00000268099 MCM2P49736 904 aa18.73■□□□□ 0.59
SCAMP2-201ENST00000268099 UVSSAQ2YD98 709 aa18.73■□□□□ 0.59
SCAMP2-201ENST00000268099 MPNDQ8N594 471 aa18.73■□□□□ 0.59
SCAMP2-201ENST00000268099 FAM184AQ8NB25 1140 aa18.73■□□□□ 0.59
SCAMP2-201ENST00000268099 ZNF830Q96NB3 372 aaPredicted RBP18.73■□□□□ 0.59
SCAMP2-201ENST00000268099 HMOX1P09601 288 aa18.72■□□□□ 0.59
SCAMP2-201ENST00000268099 RPAP2Q8IXW5 612 aaPredicted RBP18.72■□□□□ 0.59
SCAMP2-201ENST00000268099 APBB1O00213 710 aa18.72■□□□□ 0.59
SCAMP2-201ENST00000268099 CUL4AQ13619 759 aa18.72■□□□□ 0.59
SCAMP2-201ENST00000268099 CEP85Q6P2H3 762 aa18.71■□□□□ 0.59
SCAMP2-201ENST00000268099 NEXMIFQ5QGS0 1516 aa18.71■□□□□ 0.58
SCAMP2-201ENST00000268099 VGFO15240 615 aaPredicted RBP18.71■□□□□ 0.58
SCAMP2-201ENST00000268099 STK26Q9P289 416 aa18.71■□□□□ 0.58
SCAMP2-201ENST00000268099 USP25Q9UHP3 1055 aa18.71■□□□□ 0.58
SCAMP2-201ENST00000268099 KIF3AQ9Y496 699 aa18.71■□□□□ 0.58
SCAMP2-201ENST00000268099 DLG5Q8TDM6 1919 aa18.7■□□□□ 0.58
SCAMP2-201ENST00000268099 ARHGEF40Q8TER5 1519 aa18.7■□□□□ 0.58
SCAMP2-201ENST00000268099 CLTCQ00610 1675 aaKnown RBP18.7■□□□□ 0.58
SCAMP2-201ENST00000268099 CBX1P83916 185 aa18.7■□□□□ 0.58
SCAMP2-201ENST00000268099 ABCC3O15438 1527 aa18.7■□□□□ 0.58
SCAMP2-201ENST00000268099 FRMPD1Q5SYB0 1578 aa18.7■□□□□ 0.58
SCAMP2-201ENST00000268099 GADD45BO75293 160 aaPredicted RBP18.69■□□□□ 0.58
SCAMP2-201ENST00000268099 GTPBP4Q9BZE4 634 aaKnown RBP18.69■□□□□ 0.58
SCAMP2-201ENST00000268099 TTC12Q9H892 705 aaPredicted RBP18.69■□□□□ 0.58
SCAMP2-201ENST00000268099 FBLN1P23142 703 aa18.69■□□□□ 0.58
SCAMP2-201ENST00000268099 FKBP5Q13451 457 aaPredicted RBP18.69■□□□□ 0.58
SCAMP2-201ENST00000268099 C17orf53Q8N3J3 647 aaPredicted RBP18.69■□□□□ 0.58
SCAMP2-201ENST00000268099 INTS4Q96HW7 963 aaKnown RBP18.69■□□□□ 0.58
SCAMP2-201ENST00000268099 SPTLC3Q9NUV7 552 aa18.69■□□□□ 0.58
SCAMP2-201ENST00000268099 PPP4R3BQ5MIZ7 849 aa18.68■□□□□ 0.58
SCAMP2-201ENST00000268099 HDGFL2Q7Z4V5 671 aaPredicted RBP18.68■□□□□ 0.58
SCAMP2-201ENST00000268099 ASXL2Q76L83 1435 aa18.68■□□□□ 0.58
SCAMP2-201ENST00000268099 TCHHQ07283 1943 aa18.68■□□□□ 0.58
SCAMP2-201ENST00000268099 GDPD2Q9HCC8 539 aa18.68■□□□□ 0.58
SCAMP2-201ENST00000268099 POLKQ9UBT6 870 aa18.68■□□□□ 0.58
SCAMP2-201ENST00000268099 PIK3C2BO00750 1634 aa18.68■□□□□ 0.58
SCAMP2-201ENST00000268099 ADCY5O95622 1261 aa18.67■□□□□ 0.58
SCAMP2-201ENST00000268099 MINK1Q8N4C8 1332 aaPredicted RBP18.67■□□□□ 0.58
SCAMP2-201ENST00000268099 MAP2P11137 1827 aaKnown RBP18.67■□□□□ 0.58
SCAMP2-201ENST00000268099 A0A0U1RQG5 324 aaPredicted RBP18.67■□□□□ 0.58
SCAMP2-201ENST00000268099 ATP2B3Q16720 1220 aa18.67■□□□□ 0.58
SCAMP2-201ENST00000268099 CYB5RLQ6IPT4 315 aa18.67■□□□□ 0.58
SCAMP2-201ENST00000268099 SENP3Q9H4L4 574 aaPredicted RBP18.67■□□□□ 0.58
SCAMP2-201ENST00000268099 RTL1A6NKG5 1358 aa18.67■□□□□ 0.58
SCAMP2-201ENST00000268099 FAM177BA6PVY3 158 aa18.66■□□□□ 0.58
SCAMP2-201ENST00000268099 FOXD4L6Q3SYB3 417 aaPredicted RBP18.66■□□□□ 0.58
SCAMP2-201ENST00000268099 FOXD4L3Q6VB84 417 aaPredicted RBP18.66■□□□□ 0.58
SCAMP2-201ENST00000268099 USP48Q86UV5 1035 aa18.66■□□□□ 0.58
SCAMP2-201ENST00000268099 RGS12O14924 1447 aa18.66■□□□□ 0.58
SCAMP2-201ENST00000268099 BCL2L12Q9HB09 334 aa18.66■□□□□ 0.58
SCAMP2-201ENST00000268099 PTPRMP28827 1452 aa18.65■□□□□ 0.58
SCAMP2-201ENST00000268099 MSH6P52701 1360 aa18.65■□□□□ 0.58
SCAMP2-201ENST00000268099 NOL8Q76FK4 1167 aaKnown RBP18.65■□□□□ 0.58
SCAMP2-201ENST00000268099 HECW2Q9P2P5 1572 aa18.65■□□□□ 0.58
SCAMP2-201ENST00000268099 RIMS2Q9UQ26 1411 aa18.65■□□□□ 0.58
SCAMP2-201ENST00000268099 PLEKHG5O94827 1062 aa18.65■□□□□ 0.58
SCAMP2-201ENST00000268099 LMOD3Q0VAK6 560 aa18.65■□□□□ 0.58
SCAMP2-201ENST00000268099 GGT6Q6P531 493 aa18.65■□□□□ 0.58
SCAMP2-201ENST00000268099 OSBPL3Q9H4L5 887 aa18.65■□□□□ 0.58
SCAMP2-201ENST00000268099 CCDC183Q5T5S1 534 aa18.64■□□□□ 0.58
SCAMP2-201ENST00000268099 RIMBP3CA6NJZ7 1639 aa18.64■□□□□ 0.57
SCAMP2-201ENST00000268099 RIMBP3BA6NNM3 1639 aa18.64■□□□□ 0.57
SCAMP2-201ENST00000268099 RIMBP3Q9UFD9 1639 aa18.64■□□□□ 0.57
SCAMP2-201ENST00000268099 KIF20AO95235 890 aa18.64■□□□□ 0.57
SCAMP2-201ENST00000268099 MCCP23508 829 aa18.64■□□□□ 0.57
SCAMP2-201ENST00000268099 PDE1AP54750 535 aa18.64■□□□□ 0.57
SCAMP2-201ENST00000268099 PALD1Q9ULE6 856 aa18.64■□□□□ 0.57
SCAMP2-201ENST00000268099 SIGLEC1Q9BZZ2 1709 aa18.63■□□□□ 0.57
SCAMP2-201ENST00000268099 WDR33Q9C0J8 1336 aaKnown RBP18.63■□□□□ 0.57
SCAMP2-201ENST00000268099 ESYT1Q9BSJ8 1104 aa18.63■□□□□ 0.57
SCAMP2-201ENST00000268099 HCLS1P14317 486 aaPredicted RBP18.63■□□□□ 0.57
SCAMP2-201ENST00000268099 YTHDC2Q9H6S0 1430 aaKnown RBP18.63■□□□□ 0.57
SCAMP2-201ENST00000268099 TUBGCP6Q96RT7 1819 aa18.62■□□□□ 0.57
SCAMP2-201ENST00000268099 ANAPC15P60006 121 aa18.62■□□□□ 0.57
SCAMP2-201ENST00000268099 PDCL2Q8N4E4 241 aa18.62■□□□□ 0.57
SCAMP2-201ENST00000268099 MEIS3Q99687 375 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms