RNA–Protein interactions for RNA: ENST00000267176.8

SBNO1-201, Transcript of strawberry notch homolog 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SBNO1, Length 11,121 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO1-201ENST00000267176 CLIP2Q9UDT6 1046 aa7.46□□□□□ -1.22
SBNO1-201ENST00000267176 RPAP2Q8IXW5 612 aaPredicted RBP7.46□□□□□ -1.22
SBNO1-201ENST00000267176 CDK5RAP3Q96JB5 506 aa7.46□□□□□ -1.22
SBNO1-201ENST00000267176 TOP2BQ02880 1626 aa7.46□□□□□ -1.22
SBNO1-201ENST00000267176 LRPPRCP42704 1394 aaKnown RBP7.46□□□□□ -1.22
SBNO1-201ENST00000267176 SFPQP23246 707 aaKnown RBP eCLIP7.46□□□□□ -1.22
SBNO1-201ENST00000267176 ABTB2Q8N961 1025 aa7.46□□□□□ -1.22
SBNO1-201ENST00000267176 GDPD2Q9HCC8 539 aa7.46□□□□□ -1.22
SBNO1-201ENST00000267176 SMTNL1A8MU46 457 aa7.45□□□□□ -1.22
SBNO1-201ENST00000267176 ADCY5O95622 1261 aa7.45□□□□□ -1.22
SBNO1-201ENST00000267176 CLCN1P35523 988 aa7.45□□□□□ -1.22
SBNO1-201ENST00000267176 CCDC158Q5M9N0 1113 aa7.45□□□□□ -1.22
SBNO1-201ENST00000267176 SAMD1Q6SPF0 538 aaPredicted RBP7.45□□□□□ -1.22
SBNO1-201ENST00000267176 USP8P40818 1118 aa7.45□□□□□ -1.22
SBNO1-201ENST00000267176 AFAP1Q8N556 730 aa7.45□□□□□ -1.22
SBNO1-201ENST00000267176 PPP6R1Q9UPN7 881 aa7.45□□□□□ -1.22
SBNO1-201ENST00000267176 C9orf84Q5VXU9 1444 aa7.45□□□□□ -1.22
SBNO1-201ENST00000267176 FKBP4Q02790 459 aaKnown RBP eCLIP7.45□□□□□ -1.22
SBNO1-201ENST00000267176 ARHGAP29Q52LW3 1261 aa7.45□□□□□ -1.22
SBNO1-201ENST00000267176 GOLGA6L7A0A1B0GV03 622 aa7.45□□□□□ -1.22
SBNO1-201ENST00000267176 DYNC1I1O14576 645 aa7.45□□□□□ -1.22
SBNO1-201ENST00000267176 PANK2Q9BZ23 570 aa7.45□□□□□ -1.22
SBNO1-201ENST00000267176 TMPOP42166 694 aaKnown RBP7.45□□□□□ -1.22
SBNO1-201ENST00000267176 AACSQ86V21 672 aa7.45□□□□□ -1.22
SBNO1-201ENST00000267176 PTPN23Q9H3S7 1636 aa7.45□□□□□ -1.22
SBNO1-201ENST00000267176 TRIM22Q8IYM9 498 aa7.45□□□□□ -1.22
SBNO1-201ENST00000267176 NAIPQ13075 1403 aa7.45□□□□□ -1.22
SBNO1-201ENST00000267176 LUC7LQ9NQ29 371 aaKnown RBP7.45□□□□□ -1.22
SBNO1-201ENST00000267176 DUSP27Q5VZP5 1158 aa7.44□□□□□ -1.22
SBNO1-201ENST00000267176 DDX11Q96FC9 970 aa7.44□□□□□ -1.22
SBNO1-201ENST00000267176 MYL6BP14649 208 aa7.44□□□□□ -1.22
SBNO1-201ENST00000267176 CKAP2LQ8IYA6 745 aa7.44□□□□□ -1.22
SBNO1-201ENST00000267176 DAPK1P53355 1430 aa7.44□□□□□ -1.22
SBNO1-201ENST00000267176 SSH1Q8WYL5 1049 aa7.44□□□□□ -1.22
SBNO1-201ENST00000267176 URI1O94763 535 aaPredicted RBP7.44□□□□□ -1.22
SBNO1-201ENST00000267176 XRCC6P12956 609 aaKnown RBP eCLIP7.44□□□□□ -1.22
SBNO1-201ENST00000267176 CRACR2AQ9BSW2 395 aa7.44□□□□□ -1.22
SBNO1-201ENST00000267176 TANGO6Q9C0B7 1094 aa7.44□□□□□ -1.22
SBNO1-201ENST00000267176 TRMT1Q9NXH9 659 aaKnown RBP7.44□□□□□ -1.22
SBNO1-201ENST00000267176 CABP1Q9NZU7 370 aa7.44□□□□□ -1.22
SBNO1-201ENST00000267176 EPB41L2O43491 1005 aaKnown RBP7.44□□□□□ -1.22
SBNO1-201ENST00000267176 ERLIN2O94905 339 aa7.44□□□□□ -1.22
SBNO1-201ENST00000267176 IGHDP01880 384 aa7.44□□□□□ -1.22
SBNO1-201ENST00000267176 SYCP1Q15431 976 aa7.44□□□□□ -1.22
SBNO1-201ENST00000267176 PCF11O94913 1555 aaKnown RBP7.44□□□□□ -1.22
SBNO1-201ENST00000267176 IQCEQ6IPM2 695 aa7.44□□□□□ -1.22
SBNO1-201ENST00000267176 TBC1D32Q96NH3 1257 aa7.44□□□□□ -1.22
SBNO1-201ENST00000267176 ENOX2Q16206 610 aaKnown RBP7.44□□□□□ -1.22
SBNO1-201ENST00000267176 KLHL40Q2TBA0 621 aa7.44□□□□□ -1.22
SBNO1-201ENST00000267176 CCDC69A6NI79 296 aa7.44□□□□□ -1.22
SBNO1-201ENST00000267176 NEFHP12036 1026 aa7.44□□□□□ -1.22
SBNO1-201ENST00000267176 TTC39AQ5SRH9 613 aa7.44□□□□□ -1.22
SBNO1-201ENST00000267176 TAX1BP1Q86VP1 789 aa7.44□□□□□ -1.22
SBNO1-201ENST00000267176 POLA1P09884 1462 aaPredicted RBP7.43□□□□□ -1.22
SBNO1-201ENST00000267176 TRIM27P14373 513 aa7.43□□□□□ -1.22
SBNO1-201ENST00000267176 STIM1Q13586 685 aa7.43□□□□□ -1.22
SBNO1-201ENST00000267176 RRS1Q15050 365 aaKnown RBP7.43□□□□□ -1.22
SBNO1-201ENST00000267176 ZSCAN31Q96LW9 406 aaPredicted RBP7.43□□□□□ -1.22
SBNO1-201ENST00000267176 CASQ1P31415 396 aa7.43□□□□□ -1.22
SBNO1-201ENST00000267176 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.43□□□□□ -1.221e-7■■□□□ 11.7
SBNO1-201ENST00000267176 CALCOCO1Q9P1Z2 691 aa7.43□□□□□ -1.22
SBNO1-201ENST00000267176 GPRASP1Q5JY77 1395 aa7.43□□□□□ -1.22
SBNO1-201ENST00000267176 NSD3Q9BZ95 1437 aa7.43□□□□□ -1.22
SBNO1-201ENST00000267176 POLR3GO15318 223 aaPredicted RBP7.43□□□□□ -1.22
SBNO1-201ENST00000267176 TRERF1Q96PN7 1200 aa7.43□□□□□ -1.22
SBNO1-201ENST00000267176 LARP6Q9BRS8 491 aaKnown RBP7.43□□□□□ -1.22
SBNO1-201ENST00000267176 ZSCAN23Q3MJ62 389 aa7.43□□□□□ -1.22
SBNO1-201ENST00000267176 CTDP1Q9Y5B0 961 aaPredicted RBP7.43□□□□□ -1.22
SBNO1-201ENST00000267176 SCAND2PQ9GZW5 306 aaPredicted RBP7.43□□□□□ -1.22
SBNO1-201ENST00000267176 MYH11P35749 1972 aa7.43□□□□□ -1.22
SBNO1-201ENST00000267176 KIF2AO00139 706 aaPredicted RBP7.43□□□□□ -1.22
SBNO1-201ENST00000267176 ZSCAN12O43309 604 aa7.43□□□□□ -1.22
SBNO1-201ENST00000267176 BAG4O95429 457 aaKnown RBP7.43□□□□□ -1.22
SBNO1-201ENST00000267176 FCHSD2O94868 740 aa7.43□□□□□ -1.22
SBNO1-201ENST00000267176 MX1P20591 662 aa7.43□□□□□ -1.22
SBNO1-201ENST00000267176 TBC1D9Q6ZT07 1266 aa7.43□□□□□ -1.22
SBNO1-201ENST00000267176 NUTM1Q86Y26 1132 aa7.43□□□□□ -1.22
SBNO1-201ENST00000267176 CDK19Q9BWU1 502 aa7.43□□□□□ -1.22
SBNO1-201ENST00000267176 PRXQ9BXM0 1461 aa7.43□□□□□ -1.22
SBNO1-201ENST00000267176 SMARCA5O60264 1052 aaPredicted RBP7.43□□□□□ -1.22
SBNO1-201ENST00000267176 CNNM1Q9NRU3 951 aa7.43□□□□□ -1.22
SBNO1-201ENST00000267176 RBM27Q9P2N5 1060 aaKnown RBP7.42□□□□□ -1.22
SBNO1-201ENST00000267176 KRT32Q14532 448 aa7.42□□□□□ -1.22
SBNO1-201ENST00000267176 KIAA1328Q86T90 577 aa7.42□□□□□ -1.22
SBNO1-201ENST00000267176 IKQ13123 557 aaPredicted RBP7.42□□□□□ -1.22
SBNO1-201ENST00000267176 NUP133Q8WUM0 1156 aa7.42□□□□□ -1.22
SBNO1-201ENST00000267176 RBM33Q96EV2 1170 aaKnown RBP7.42□□□□□ -1.22
SBNO1-201ENST00000267176 ANO10Q9NW15 660 aa7.42□□□□□ -1.22
SBNO1-201ENST00000267176 MCM5P33992 734 aa7.42□□□□□ -1.22
SBNO1-201ENST00000267176 NLRP2Q9NX02 1062 aa7.42□□□□□ -1.22
SBNO1-201ENST00000267176 NCOA1Q15788 1441 aa7.42□□□□□ -1.22
SBNO1-201ENST00000267176 PLEKHH1Q9ULM0 1364 aa7.42□□□□□ -1.22
SBNO1-201ENST00000267176 CDKL5O76039 1030 aa7.42□□□□□ -1.22
SBNO1-201ENST00000267176 SEPT7Q16181 437 aaKnown RBP7.42□□□□□ -1.22
SBNO1-201ENST00000267176 FAM177BA6PVY3 158 aa7.42□□□□□ -1.22
SBNO1-201ENST00000267176 RAB11FIP3O75154 756 aa7.41□□□□□ -1.22
SBNO1-201ENST00000267176 KRT18P05783 430 aaKnown RBP7.41□□□□□ -1.22
SBNO1-201ENST00000267176 KIF5CO60282 957 aa7.41□□□□□ -1.22
SBNO1-201ENST00000267176 DDX54Q8TDD1 881 aaKnown RBP7.41□□□□□ -1.22
SBNO1-201ENST00000267176 PRIMPOLQ96LW4 560 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms